RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 TMEM196Q5HYL7 178 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 CBWD3Q5JTY5 395 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 CBWD5Q5RIA9 395 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 SNX30Q5VWJ9 437 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 SPEM1Q8N4L4 309 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 TATDN2Q93075 761 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 ATP2A3Q93084 1043 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 CYFIP2Q96F07 1278 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 CEP63Q96MT8 703 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 ARMCX3Q9UH62 379 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 COQ4Q9Y3A0 265 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 PCDHGA2Q9Y5H1 932 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 HHLA1C9JL84 531 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 LILRB5O75023 590 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 LMNAP02545 664 aaKnown RBP11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 ZDHHC11BP0C7U3 371 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 MBL2P11226 248 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 CLEC20AQ6ZU45 233 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 SYNPOQ8N3V7 929 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 KIAA1958Q8N8K9 716 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 ZBTB44Q8NCP5 570 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 FAM126AQ9BYI3 521 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 DNAI2Q9GZS0 605 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 LINC00597Q9H2U6 94 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 CISHQ9NSE2 258 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 SMPD4Q9NXE4 827 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 CHMP5Q9NZZ3 219 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 CHORDC1Q9UHD1 332 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 CTNND2Q9UQB3 1225 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 PAPSS2O95340 614 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC4-204ENST00000524797 CXCL12P48061 93 aa11.81□□□□□ -0.52
TRAPPC4-204ENST00000524797 GALK1P51570 392 aa11.81□□□□□ -0.52
TRAPPC4-204ENST00000524797 AMPD2Q01433 879 aa11.81□□□□□ -0.52
TRAPPC4-204ENST00000524797 GRSF1Q12849 480 aaKnown RBP eCLIP11.81□□□□□ -0.52
TRAPPC4-204ENST00000524797 PPP2R5DQ14738 602 aa11.81□□□□□ -0.52
TRAPPC4-204ENST00000524797 HECTD3Q5T447 861 aa11.81□□□□□ -0.52
TRAPPC4-204ENST00000524797 NAIF1Q69YI7 327 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC4-204ENST00000524797 KLHL10Q6JEL2 608 aa11.81□□□□□ -0.52
TRAPPC4-204ENST00000524797 TTI2Q6NXR4 508 aa11.81□□□□□ -0.52
TRAPPC4-204ENST00000524797 GPRIN1Q7Z2K8 1008 aa11.81□□□□□ -0.52
TRAPPC4-204ENST00000524797 FILIP1Q7Z7B0 1213 aa11.81□□□□□ -0.52
TRAPPC4-204ENST00000524797 DDX42Q86XP3 938 aaKnown RBP eCLIP11.81□□□□□ -0.52
TRAPPC4-204ENST00000524797 TTC39CQ8N584 583 aa11.81□□□□□ -0.52
TRAPPC4-204ENST00000524797 NELFBQ8WX92 580 aa11.81□□□□□ -0.52
TRAPPC4-204ENST00000524797 SLC35C1Q96A29 364 aa11.81□□□□□ -0.52
TRAPPC4-204ENST00000524797 ARID3AQ99856 593 aa11.81□□□□□ -0.52
TRAPPC4-204ENST00000524797 FBXO44Q9H4M3 255 aa11.81□□□□□ -0.52
TRAPPC4-204ENST00000524797 METTL14Q9HCE5 456 aaKnown RBP11.81□□□□□ -0.52
TRAPPC4-204ENST00000524797 CFAP97Q9P2B7 532 aa11.81□□□□□ -0.52
TRAPPC4-204ENST00000524797 FAM186AA6NE01 2351 aa11.81□□□□□ -0.52
TRAPPC4-204ENST00000524797 BIN1O00499 593 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 COCHO43405 550 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 NFATC1O95644 943 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 EGFP01133 1207 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 PGFP49763 221 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 TUBP50607 506 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 RAD23BP54727 409 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 NR1H3Q13133 447 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 CCDC40Q4G0X9 1142 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 PPP1R26Q5T8A7 1209 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 FOXR2Q6PJQ5 311 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 SUMF1Q8NBK3 374 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 SLC4A11Q8NBS3 891 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 ATRIPQ8WXE1 791 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 JAKMIP2Q96AA8 810 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 ZFRQ96KR1 1074 aaKnown RBP11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 HEXIM2Q96MH2 286 aaKnown RBP11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 P2RY13Q9BPV8 354 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 FAM124BQ9H5Z6 455 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 CCSER2Q9H7U1 834 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 FBRSL1Q9HCM7 1045 aaKnown RBP11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 C2orf42Q9NWW7 574 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 EML5Q05BV3 1969 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 K7ESF4 209 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 FMO5P49326 533 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 NRLP54845 237 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 UBE2HP62256 183 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 GAB4Q2WGN9 574 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 ZNF394Q53GI3 561 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 PKN3Q6P5Z2 889 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 CD101Q93033 1021 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 EXOC4Q96A65 974 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 TMEM176AQ96HP8 235 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 DUSP16Q9BY84 665 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 PNPLA8Q9NP80 782 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 SCML2Q9UQR0 700 aa11.8□□□□□ -0.52
TRAPPC4-204ENST00000524797 BICDL2A1A5D9 508 aa11.79□□□□□ -0.52
TRAPPC4-204ENST00000524797 SLC9A3R1O14745 358 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC4-204ENST00000524797 SCAMP3O14828 347 aaKnown RBP11.79□□□□□ -0.52
TRAPPC4-204ENST00000524797 CYP17A1P05093 508 aa11.79□□□□□ -0.52
TRAPPC4-204ENST00000524797 DRD1P21728 446 aa11.79□□□□□ -0.52
TRAPPC4-204ENST00000524797 STX17P56962 302 aa11.79□□□□□ -0.52
TRAPPC4-204ENST00000524797 DMWDQ09019 674 aa11.79□□□□□ -0.52
TRAPPC4-204ENST00000524797 CUL2Q13617 745 aa11.79□□□□□ -0.52
TRAPPC4-204ENST00000524797 ARHGAP17Q68EM7 881 aa11.79□□□□□ -0.52
TRAPPC4-204ENST00000524797 UBR7Q8N806 425 aa11.79□□□□□ -0.52
TRAPPC4-204ENST00000524797 TLR8Q9NR97 1041 aaKnown RBP11.79□□□□□ -0.52
TRAPPC4-204ENST00000524797 E2F8A0AVK6 867 aa11.78□□□□□ -0.52
TRAPPC4-204ENST00000524797 CHURC1-FNTBB4DL54 471 aa11.78□□□□□ -0.52
TRAPPC4-204ENST00000524797 PMM2O15305 246 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms