RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 PBXIP1Q96AQ6 731 aa13.21□□□□□ -0.29
CCNC-216ENST00000523961 SLC22A12Q96S37 553 aa13.21□□□□□ -0.29
CCNC-216ENST00000523961 CYP2S1Q96SQ9 504 aa13.21□□□□□ -0.29
CCNC-216ENST00000523961 LSM14BQ9BX40 385 aaKnown RBP13.21□□□□□ -0.29
CCNC-216ENST00000523961 SMG9Q9H0W8 520 aaKnown RBP13.21□□□□□ -0.29
CCNC-216ENST00000523961 PLCB1Q9NQ66 1216 aa13.21□□□□□ -0.29
CCNC-216ENST00000523961 TLR8Q9NR97 1041 aaKnown RBP13.21□□□□□ -0.29
CCNC-216ENST00000523961 THG1LQ9NWX6 298 aaKnown RBP13.21□□□□□ -0.29
CCNC-216ENST00000523961 GMIPQ9P107 970 aa13.21□□□□□ -0.29
CCNC-216ENST00000523961 CHORDC1Q9UHD1 332 aaPredicted RBP13.21□□□□□ -0.29
CCNC-216ENST00000523961 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.21□□□□□ -0.29
CCNC-216ENST00000523961 DENND4CQ5VZ89 1909 aa13.21□□□□□ -0.3
CCNC-216ENST00000523961 M0QYV0 167 aa13.2□□□□□ -0.3
CCNC-216ENST00000523961 CHADO15335 359 aa13.2□□□□□ -0.3
CCNC-216ENST00000523961 MED7O43513 233 aa13.2□□□□□ -0.3
CCNC-216ENST00000523961 OAS1P00973 400 aaKnown RBP13.2□□□□□ -0.3
CCNC-216ENST00000523961 ATP1A3P13637 1013 aa13.2□□□□□ -0.3
CCNC-216ENST00000523961 UCHL3P15374 230 aa13.2□□□□□ -0.3
CCNC-216ENST00000523961 GNA15P30679 374 aa13.2□□□□□ -0.3
CCNC-216ENST00000523961 PLA2G4AP47712 749 aa13.2□□□□□ -0.3
CCNC-216ENST00000523961 TUBP50607 506 aa13.2□□□□□ -0.3
CCNC-216ENST00000523961 PLCB2Q00722 1185 aa13.2□□□□□ -0.3
CCNC-216ENST00000523961 IQCB1Q15051 598 aa13.2□□□□□ -0.3
CCNC-216ENST00000523961 NFKBIBQ15653 356 aa13.2□□□□□ -0.3
CCNC-216ENST00000523961 PKDCCQ504Y2 493 aa13.2□□□□□ -0.3
CCNC-216ENST00000523961 ARHGAP29Q52LW3 1261 aa13.2□□□□□ -0.3
CCNC-216ENST00000523961 RAB41Q5JT25 222 aa13.2□□□□□ -0.3
CCNC-216ENST00000523961 HECTD3Q5T447 861 aa13.2□□□□□ -0.3
CCNC-216ENST00000523961 CCDC186Q7Z3E2 898 aa13.2□□□□□ -0.3
CCNC-216ENST00000523961 UBA3Q8TBC4 463 aa13.2□□□□□ -0.3
CCNC-216ENST00000523961 ZSWIM1Q9BR11 485 aa13.2□□□□□ -0.3
CCNC-216ENST00000523961 LRFN3Q9BTN0 628 aa13.2□□□□□ -0.3
CCNC-216ENST00000523961 LRRC4Q9HBW1 653 aa13.2□□□□□ -0.3
CCNC-216ENST00000523961 TRPV5Q9NQA5 729 aa13.2□□□□□ -0.3
CCNC-216ENST00000523961 ARHGAP26Q9UNA1 814 aa13.2□□□□□ -0.3
CCNC-216ENST00000523961 CCL26Q9Y258 94 aa13.2□□□□□ -0.3
CCNC-216ENST00000523961 DAAM1Q9Y4D1 1078 aa13.2□□□□□ -0.3
CCNC-216ENST00000523961 USP3Q9Y6I4 520 aa13.2□□□□□ -0.3
CCNC-216ENST00000523961 OBSL1O75147 1896 aa13.2□□□□□ -0.3
CCNC-216ENST00000523961 NUP210Q8TEM1 1887 aaPredicted RBP13.2□□□□□ -0.3
CCNC-216ENST00000523961 ZNF638Q14966 1978 aaKnown RBP13.2□□□□□ -0.3
CCNC-216ENST00000523961 FOXN3O00409 490 aaPredicted RBP13.19□□□□□ -0.3
CCNC-216ENST00000523961 CYP26A1O43174 497 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 THAP12O43422 761 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 OLFM2O95897 454 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 CALCAP01258 141 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 TCF3P15923 654 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 PSEN1P49768 467 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 BPIFB4P59827 614 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 TPM4P67936 248 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 SLC7A9P82251 487 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 UBXN1Q04323 297 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 PTK2Q05397 1052 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 RAPGEF1Q13905 1077 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 DRAP1Q14919 205 aaPredicted RBP13.19□□□□□ -0.3
CCNC-216ENST00000523961 MEA1Q16626 185 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 SLC44A4Q53GD3 710 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 CC2D1AQ6P1N0 951 aaPredicted RBP13.19□□□□□ -0.3
CCNC-216ENST00000523961 HFE2Q6ZVN8 426 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 APTXQ7Z2E3 356 aaKnown RBP13.19□□□□□ -0.3
CCNC-216ENST00000523961 SIX5Q8N196 739 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 SLC35F5Q8WV83 523 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 ZNF606Q8WXB4 792 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 KCTD13Q8WZ19 329 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 SHDQ96IW2 340 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 LRRC3BQ96PB8 259 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 RNF38Q9H0F5 515 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 MFSD1Q9H3U5 465 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 CBX8Q9HC52 389 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 ARHGEF3Q9NR81 526 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 AJAP1Q9UKB5 411 aaPredicted RBP13.19□□□□□ -0.3
CCNC-216ENST00000523961 CA14Q9ULX7 337 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 FHOD1Q9Y613 1164 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 ANAPC1Q9H1A4 1944 aa13.19□□□□□ -0.3
CCNC-216ENST00000523961 PATJQ8NI35 1801 aa13.18□□□□□ -0.3
CCNC-216ENST00000523961 KRBA1A5PL33 1030 aa13.18□□□□□ -0.3
CCNC-216ENST00000523961 TULP2O00295 520 aa13.18□□□□□ -0.3
CCNC-216ENST00000523961 COCHO43405 550 aa13.18□□□□□ -0.3
CCNC-216ENST00000523961 TLR5O60602 858 aa13.18□□□□□ -0.3
CCNC-216ENST00000523961 MBL2P11226 248 aaPredicted RBP13.18□□□□□ -0.3
CCNC-216ENST00000523961 TKTL1P51854 596 aa13.18□□□□□ -0.3
CCNC-216ENST00000523961 PRKCQQ04759 706 aa13.18□□□□□ -0.3
CCNC-216ENST00000523961 USP4Q13107 963 aa13.18□□□□□ -0.3
CCNC-216ENST00000523961 SYCP1Q15431 976 aa13.18□□□□□ -0.3
CCNC-216ENST00000523961 MLF2Q15773 248 aaPredicted RBP13.18□□□□□ -0.3
CCNC-216ENST00000523961 ZNF77Q15935 545 aa13.18□□□□□ -0.3
CCNC-216ENST00000523961 FILIP1LQ4L180 1135 aa13.18□□□□□ -0.3
CCNC-216ENST00000523961 DDX42Q86XP3 938 aaKnown RBP eCLIP13.18□□□□□ -0.3
CCNC-216ENST00000523961 SUGP1Q8IWZ8 645 aaKnown RBP13.18□□□□□ -0.3
CCNC-216ENST00000523961 FAM71AQ8IYT1 594 aa13.18□□□□□ -0.3
CCNC-216ENST00000523961 SIX6OS1Q8N1H7 587 aa13.18□□□□□ -0.3
CCNC-216ENST00000523961 ARHGAP18Q8N392 663 aa13.18□□□□□ -0.3
CCNC-216ENST00000523961 FBXL6Q8N531 539 aa13.18□□□□□ -0.3
CCNC-216ENST00000523961 CSGALNACT1Q8TDX6 532 aa13.18□□□□□ -0.3
CCNC-216ENST00000523961 SH3RF2Q8TEC5 729 aa13.18□□□□□ -0.3
CCNC-216ENST00000523961 SECISBP2LQ93073 1101 aaKnown RBP13.18□□□□□ -0.3
CCNC-216ENST00000523961 HSFY1Q96LI6 401 aa13.18□□□□□ -0.3
CCNC-216ENST00000523961 PCMTD1Q96MG8 357 aaPredicted RBP13.18□□□□□ -0.3
CCNC-216ENST00000523961 ERGIC2Q96RQ1 377 aa13.18□□□□□ -0.3
CCNC-216ENST00000523961 NAA15Q9BXJ9 866 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms