RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	ATP6V0A1	Q93050	837 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	KISS1R	Q969F8	398 aa	Predicted RBP	5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	OSBP2	Q969R2	916 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	CHMP4C	Q96CF2	233 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	LOXL4	Q96JB6	756 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	FCRL2	Q96LA5	508 aa	Predicted RBP	5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	CDC6	Q99741	560 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	NOL10	Q9BSC4	688 aa	Known RBP	5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	YIPF4	Q9BSR8	244 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	C16orf70	Q9BSU1	422 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	MCMBP	Q9BTE3	642 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	RHOBTB2	Q9BYZ6	727 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	TRIM4	Q9C037	500 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	RNPEP	Q9H4A4	650 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	SH2D4A	Q9H788	454 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	WDR6	Q9NNW5	1121 aa	Known RBP	5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	VPS45	Q9NRW7	570 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	IL17B	Q9UHF5	180 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	PAXBP1	Q9Y5B6	917 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	HIVEP3	Q5T1R4	2406 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	CLUH	O75153	1309 aa		5.69	□□□□□ -1.5
PABPC1-223	ENST00000523636	ANO9	A1A5B4	782 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	FGF10	O15520	208 aa	Predicted RBP	5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	PRODH	O43272	600 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	DLX3	O60479	287 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	WNT11	O96014	354 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	GSTM1	P09488	218 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	ALAS1	P13196	640 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	IFNGR1	P15260	489 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	CAST	P20810	708 aa	Known RBP	5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	FUT4	P22083	530 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	PSMA3	P25788	255 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	CD52	P31358	61 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	CNR2	P34972	360 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	SEPHS1	P49903	392 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	SCRN1	Q12765	414 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	LRP8	Q14114	963 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	SMC1A	Q14683	1233 aa	Known RBP	5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	NONO	Q15233	471 aa	Known RBP eCLIP	5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	DGKD	Q16760	1214 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	FBXO47	Q5MNV8	452 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	SLC35F1	Q5T1Q4	408 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	DAB2IP	Q5VWQ8	1189 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	FOXB2	Q5VYV0	432 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	E4F1	Q66K89	784 aa	Predicted RBP	5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	ZCCHC8	Q6NZY4	707 aa	Known RBP	5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	SLC23A3	Q6PIS1	610 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	C1orf228	Q6PIY5	440 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	SLC30A10	Q6XR72	485 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	NFXL1	Q6ZNB6	911 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	C15orf39	Q6ZRI6	1047 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	C1orf122	Q6ZSJ8	110 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	RSRC2	Q7L4I2	434 aa	Known RBP	5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	LONP2	Q86WA8	852 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	MARCH9	Q86YJ5	346 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	TMC8	Q8IU68	726 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	PASD1	Q8IV76	773 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	KSR1	Q8IVT5	923 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	WDR63	Q8IWG1	891 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	TRMT2A	Q8IZ69	625 aa	Known RBP	5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	AGBL5	Q8NDL9	886 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	APPL2	Q8NEU8	664 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	GJA10	Q969M2	543 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	C1orf159	Q96HA4	380 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	CDK5RAP3	Q96JB5	506 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	EXOC2	Q96KP1	924 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	EIF2AK1	Q9BQI3	630 aa	Known RBP	5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	RIOK1	Q9BRS2	568 aa	Known RBP	5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	AP1M1	Q9BXS5	423 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	SFXN1	Q9H9B4	322 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	CARS2	Q9HA77	564 aa	Known RBP	5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	PIH1D3	Q9NQM4	214 aa	Known RBP	5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	PCMTD2	Q9NV79	361 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	TNRC6B	Q9UPQ9	1833 aa	Known RBP	5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	MED13L	Q71F56	2210 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	CABIN1	Q9Y6J0	2220 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	PDCD11	Q14690	1871 aa	Known RBP	5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	NRCAM	Q92823	1304 aa		5.68	□□□□□ -1.5
PABPC1-223	ENST00000523636	THADA	Q6YHU6	1953 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	FAM170A	A1A519	330 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	C17orf102	A2RUQ5	167 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	GTPBP10	A4D1E9	387 aa	Known RBP	5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	TBKBP1	A7MCY6	615 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	GSG1L2	A8MUP6	293 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	NFIB	O00712	420 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	MGEA5	O60502	916 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	RFPL1	O75677	317 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	ABLIM3	O94929	683 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	PAPSS2	O95340	614 aa	Predicted RBP	5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	PAPLN	O95428	1278 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	SMIM10L2A	P0DMW4	78 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	SMIM10L2B	P0DMW5	78 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	CD96	P40200	585 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	ABCG1	P45844	678 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	STT3A	P46977	705 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	RXRG	P48443	463 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	CYP4F3	Q08477	520 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	DUSP4	Q13115	394 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	KRT72	Q14CN4	511 aa		5.67	□□□□□ -1.5
PABPC1-223	ENST00000523636	ELF2	Q15723	593 aa		5.67	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms