RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 MANEALQ5VSG8 457 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 MPP5Q8N3R9 675 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 SIMC1Q8NDZ2 872 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 NSUN7Q8NE18 718 aaKnown RBP5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 SPPL3Q8TCT6 385 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 OTUD7AQ8TE49 926 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 RAPGEF4Q8WZA2 1011 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 PTCD3Q96EY7 689 aaKnown RBP5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 ZDHHC12Q96GR4 267 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 TBATAQ96M53 351 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 MED15Q96RN5 788 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 TRIB1Q96RU8 372 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 CRAMP1Q96RY5 1269 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 SORBS1Q9BX66 1292 aaKnown RBP5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 SMOC2Q9H3U7 446 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 RIOX1Q9H6W3 641 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 ITM2CQ9NQX7 267 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 TBCCD1Q9NVR7 557 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 SRP68Q9UHB9 627 aaKnown RBP5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 CDYLQ9Y232 598 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 CCDC195A0A1B0GUA6 201 aa5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 MYADML2A6NDP7 307 aa5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 ASNA1O43681 348 aa5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 SH3BP5O60239 455 aa5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 CBFA2T3O75081 653 aa5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 CD53P19397 219 aa5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 PPIFP30405 207 aaKnown RBP5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 GCLCP48506 637 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 PTDSS1P48651 473 aaKnown RBP5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 MPP3Q13368 585 aa5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 BIRC3Q13489 604 aa5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 INSCQ1MX18 579 aa5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 MRNIPQ6NTE8 343 aa5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 Q6ZNX1 250 aa5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 KCTD20Q7Z5Y7 419 aa5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 ZNF354CQ86Y25 554 aa5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 GALNT15Q8N3T1 639 aa5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 MOGAT1Q96PD6 335 aa5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 AIFM2Q9BRQ8 373 aa5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 TRIM5Q9C035 493 aa5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 PCDHAC1Q9H158 963 aa5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 TP63Q9H3D4 680 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 CXorf36Q9H7Y0 433 aa5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 ALG13Q9NP73 1137 aaKnown RBP5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 ANAPC4Q9UJX5 808 aa5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 ZMYND8Q9ULU4 1186 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 SHOC2Q9UQ13 582 aa5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 CEP83Q9Y592 693 aa5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 COL11A2P13942 1736 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P1-201ENST00000522557 AQP7P3A6NL99 342 aa5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 ZAR1LA6NP61 321 aa5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 ADM5C9JUS6 153 aa5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 MYO1CO00159 1063 aa5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 RAB27BO00194 218 aa5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 CD3EAPO15446 510 aaKnown RBP5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 RASSF9O75901 435 aa5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 SOAT2O75908 522 aa5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 NTSR2O95665 410 aa5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 PECAM1P16284 738 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 LRPAP1P30533 357 aa5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 CXCR5P32302 372 aa5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 PTH2RP49190 550 aa5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 PPM1FP49593 454 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 ANXA11P50995 505 aaKnown RBP5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 LILRA4P59901 499 aa5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 TIAL1Q01085 375 aaKnown RBP eCLIP5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 NSUN2Q08J23 767 aaKnown RBP eCLIP5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 MYO1EQ12965 1108 aa5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 PRKG1Q13976 671 aa5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 FBXO38Q6PIJ6 1188 aa5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 HERC6Q8IVU3 1022 aa5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 RSC1A1Q92681 617 aa5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 UBXN10Q96LJ8 280 aa5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 WDR24Q96S15 920 aa5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 SMOQ99835 787 aa5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 ZBTB26Q9HCK0 441 aa5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 PRDM8Q9NQV8 689 aa5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 TBC1D23Q9NUY8 699 aa5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 LPAR3Q9UBY5 353 aa5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 NEU2Q9Y3R4 380 aa5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 FER1L4A9Z1Z3 1794 aa5.5□□□□□ -1.53
HMGB1P1-201ENST00000522557 A0A0B4J269 797 aa5.49□□□□□ -1.53
HMGB1P1-201ENST00000522557 PIP5K1BO14986 540 aa5.49□□□□□ -1.53
HMGB1P1-201ENST00000522557 GATA3P23771 443 aa5.49□□□□□ -1.53
HMGB1P1-201ENST00000522557 CST5P28325 142 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P1-201ENST00000522557 HTR7P34969 479 aa5.49□□□□□ -1.53
HMGB1P1-201ENST00000522557 SIM2Q14190 667 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P1-201ENST00000522557 KCNAB1Q14722 419 aa5.49□□□□□ -1.53
HMGB1P1-201ENST00000522557 CD300EQ496F6 205 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P1-201ENST00000522557 FBXO47Q5MNV8 452 aa5.49□□□□□ -1.53
HMGB1P1-201ENST00000522557 SP5Q6BEB4 398 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P1-201ENST00000522557 ABLIM2Q6H8Q1 611 aa5.49□□□□□ -1.53
HMGB1P1-201ENST00000522557 COLGALT2Q8IYK4 626 aa5.49□□□□□ -1.53
HMGB1P1-201ENST00000522557 BPIFB1Q8TDL5 484 aa5.49□□□□□ -1.53
HMGB1P1-201ENST00000522557 HERVK_113Q902F9 699 aa5.49□□□□□ -1.53
HMGB1P1-201ENST00000522557 OSBPL9Q96SU4 736 aa5.49□□□□□ -1.53
HMGB1P1-201ENST00000522557 TWSG1Q9GZX9 223 aa5.49□□□□□ -1.53
HMGB1P1-201ENST00000522557 PRDM13Q9H4Q3 707 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms