RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 TTLL2Q9BWV7 592 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 PACSIN1Q9BY11 444 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 PRKD2Q9BZL6 878 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 SFXN1Q9H9B4 322 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 CLDND1Q9NY35 253 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 CLEC1BQ9P126 229 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 REXO2Q9Y3B8 237 aaKnown RBP17.11■□□□□ 0.33
LSM1-204ENST00000522515 FAM92AA1XBS5 289 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 NRDCO43847 1150 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 TBX10O75333 385 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 PAPLNO95428 1278 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 ZBED1O96006 694 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 SRGAP2BP0DMP2 458 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 ABCB4P21439 1286 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 YWHAQP27348 245 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 GALCP54803 685 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 SNX16P57768 344 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 DAOAP59103 153 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 COL19A1Q14993 1142 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 SPA17Q15506 151 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 PM20D1Q6GTS8 502 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 OR6B2Q6IFH4 312 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 SYCE2Q6PIF2 218 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 EP400NLQ6ZTU2 488 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 TOGARAM2Q6ZUX3 1019 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 FAM183BPQ6ZVS7 135 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 PIWIL1Q96J94 861 aaKnown RBP17.11■□□□□ 0.33
LSM1-204ENST00000522515 VCPIP1Q96JH7 1222 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 MYRFLQ96LU7 910 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 APOL5Q9BWW9 433 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 LRRC3Q9BY71 257 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 FBXO44Q9H4M3 255 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 ZNF334Q9HCZ1 680 aaPredicted RBP17.11■□□□□ 0.33
LSM1-204ENST00000522515 CNGB3Q9NQW8 809 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 HCFC1R1Q9NWW0 138 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 COMMD8Q9NX08 183 aa17.11■□□□□ 0.33
LSM1-204ENST00000522515 NCK2O43639 380 aa17.1■□□□□ 0.33
LSM1-204ENST00000522515 XYLBO75191 536 aa17.1■□□□□ 0.33
LSM1-204ENST00000522515 CALB1P05937 261 aa17.1■□□□□ 0.33
LSM1-204ENST00000522515 LTBRP36941 435 aa17.1■□□□□ 0.33
LSM1-204ENST00000522515 MAGEA1P43355 309 aa17.1■□□□□ 0.33
LSM1-204ENST00000522515 MRPS5P82675 430 aaKnown RBP17.1■□□□□ 0.33
LSM1-204ENST00000522515 TAF10Q12962 218 aa17.1■□□□□ 0.33
LSM1-204ENST00000522515 RARS2Q5T160 578 aaKnown RBP17.1■□□□□ 0.33
LSM1-204ENST00000522515 OLFML1Q6UWY5 402 aa17.1■□□□□ 0.33
LSM1-204ENST00000522515 BHLHA9Q7RTU4 235 aa17.1■□□□□ 0.33
LSM1-204ENST00000522515 HS6ST3Q8IZP7 471 aa17.1■□□□□ 0.33
LSM1-204ENST00000522515 CMASQ8NFW8 434 aaPredicted RBP17.1■□□□□ 0.33
LSM1-204ENST00000522515 FBXO32Q969P5 355 aa17.1■□□□□ 0.33
LSM1-204ENST00000522515 PABPC5Q96DU9 382 aaKnown RBP17.1■□□□□ 0.33
LSM1-204ENST00000522515 TRMT2BQ96GJ1 504 aaKnown RBP17.1■□□□□ 0.33
LSM1-204ENST00000522515 CORO1BQ9BR76 489 aa17.1■□□□□ 0.33
LSM1-204ENST00000522515 DNMT3BQ9UBC3 853 aaKnown RBP17.1■□□□□ 0.33
LSM1-204ENST00000522515 STRIP2Q9ULQ0 834 aa17.1■□□□□ 0.33
LSM1-204ENST00000522515 SCML2Q9UQR0 700 aa17.1■□□□□ 0.33
LSM1-204ENST00000522515 PCDHA13Q9Y5I0 950 aa17.1■□□□□ 0.33
LSM1-204ENST00000522515 ZNF638Q14966 1978 aaKnown RBP17.09■□□□□ 0.33
LSM1-204ENST00000522515 NCANO14594 1321 aa17.09■□□□□ 0.33
LSM1-204ENST00000522515 ANKRD62A6NC57 917 aa17.09■□□□□ 0.33
LSM1-204ENST00000522515 ATMINO43313 823 aaPredicted RBP17.09■□□□□ 0.33
LSM1-204ENST00000522515 FBXO21O94952 628 aa17.09■□□□□ 0.33
LSM1-204ENST00000522515 IPO7O95373 1038 aaKnown RBP17.09■□□□□ 0.33
LSM1-204ENST00000522515 POU2F2P09086 479 aa17.09■□□□□ 0.33
LSM1-204ENST00000522515 H2AFZP0C0S5 128 aa17.09■□□□□ 0.33
LSM1-204ENST00000522515 PTPN2P17706 415 aa17.09■□□□□ 0.33
LSM1-204ENST00000522515 RRM1P23921 792 aa17.09■□□□□ 0.33
LSM1-204ENST00000522515 PGFP49763 221 aa17.09■□□□□ 0.33
LSM1-204ENST00000522515 ZNF268Q14587 947 aaPredicted RBP17.09■□□□□ 0.33
LSM1-204ENST00000522515 H2AFVQ71UI9 128 aa17.09■□□□□ 0.33
LSM1-204ENST00000522515 TMC8Q8IU68 726 aa17.09■□□□□ 0.33
LSM1-204ENST00000522515 SCML4Q8N228 414 aa17.09■□□□□ 0.33
LSM1-204ENST00000522515 SMG7Q92540 1137 aaKnown RBP17.09■□□□□ 0.33
LSM1-204ENST00000522515 ZNF653Q96CK0 615 aa17.09■□□□□ 0.33
LSM1-204ENST00000522515 MCRS1Q96EZ8 462 aa17.09■□□□□ 0.33
LSM1-204ENST00000522515 THAP2Q9H0W7 228 aa17.09■□□□□ 0.33
LSM1-204ENST00000522515 EHD2Q9NZN4 543 aa17.09■□□□□ 0.33
LSM1-204ENST00000522515 GMIPQ9P107 970 aa17.09■□□□□ 0.33
LSM1-204ENST00000522515 CHORDC1Q9UHD1 332 aaPredicted RBP17.09■□□□□ 0.33
LSM1-204ENST00000522515 TFR2Q9UP52 801 aa17.09■□□□□ 0.33
LSM1-204ENST00000522515 EYSQ5T1H1 3165 aa17.09■□□□□ 0.33
LSM1-204ENST00000522515 MYO16Q9Y6X6 1858 aa17.08■□□□□ 0.32
LSM1-204ENST00000522515 YJEFN3A6XGL0 299 aa17.08■□□□□ 0.32
LSM1-204ENST00000522515 E7ENQ6 273 aa17.08■□□□□ 0.32
LSM1-204ENST00000522515 GOLGA8SH3BPF8 625 aa17.08■□□□□ 0.32
LSM1-204ENST00000522515 HOXB8P17481 243 aaPredicted RBP17.08■□□□□ 0.32
LSM1-204ENST00000522515 SLC6A3Q01959 620 aa17.08■□□□□ 0.32
LSM1-204ENST00000522515 TAF5Q15542 800 aa17.08■□□□□ 0.32
LSM1-204ENST00000522515 C10orf76Q5T2E6 689 aa17.08■□□□□ 0.32
LSM1-204ENST00000522515 HFE2Q6ZVN8 426 aa17.08■□□□□ 0.32
LSM1-204ENST00000522515 GRASPQ7Z6J2 395 aaPredicted RBP17.08■□□□□ 0.32
LSM1-204ENST00000522515 SCD5Q86SK9 330 aa17.08■□□□□ 0.32
LSM1-204ENST00000522515 ZDHHC17Q8IUH5 632 aa17.08■□□□□ 0.32
LSM1-204ENST00000522515 PPM1EQ8WY54 764 aa17.08■□□□□ 0.32
LSM1-204ENST00000522515 ARHGEF26Q96DR7 871 aa17.08■□□□□ 0.32
LSM1-204ENST00000522515 SLITRK1Q96PX8 696 aa17.08■□□□□ 0.32
LSM1-204ENST00000522515 PIDD1Q9HB75 910 aa17.08■□□□□ 0.32
LSM1-204ENST00000522515 IL21Q9HBE4 155 aa17.08■□□□□ 0.32
LSM1-204ENST00000522515 WDR35Q9P2L0 1181 aa17.08■□□□□ 0.32
LSM1-204ENST00000522515 CNOT8Q9UFF9 292 aaKnown RBP17.08■□□□□ 0.32
LSM1-204ENST00000522515 CDH22Q9UJ99 828 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms