RNA–Protein interactions for RNA: ENST00000522111.2

TRNP1-201, Transcript of TMF1-regulated nuclear protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRNP1, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1-201ENST00000522111 IFRD2Q12894 506 aaPredicted RBP28.53■■■□□ 2.16
TRNP1-201ENST00000522111 RAB41Q5JT25 222 aa28.53■■■□□ 2.16
TRNP1-201ENST00000522111 SCN4BQ8IWT1 228 aa28.53■■■□□ 2.16
TRNP1-201ENST00000522111 FAM172AQ8WUF8 416 aa28.53■■■□□ 2.16
TRNP1-201ENST00000522111 KRT12Q99456 494 aa28.53■■■□□ 2.16
TRNP1-201ENST00000522111 ANKZF1Q9H8Y5 726 aa28.53■■■□□ 2.16
TRNP1-201ENST00000522111 C2CD2LO14523 706 aa28.52■■■□□ 2.16
TRNP1-201ENST00000522111 EFHC1Q5JVL4 640 aa28.52■■■□□ 2.16
TRNP1-201ENST00000522111 STKLD1Q8NE28 680 aa28.52■■■□□ 2.16
TRNP1-201ENST00000522111 ZNF558Q96NG5 402 aa28.52■■■□□ 2.16
TRNP1-201ENST00000522111 HINFPQ9BQA5 517 aa28.52■■■□□ 2.16
TRNP1-201ENST00000522111 PLVAPQ9BX97 442 aa28.52■■■□□ 2.16
TRNP1-201ENST00000522111 PLEKHA4Q9H4M7 779 aa28.52■■■□□ 2.16
TRNP1-201ENST00000522111 CXXC1Q9P0U4 656 aaPredicted RBP28.52■■■□□ 2.16
TRNP1-201ENST00000522111 ZRANB2O95218 330 aaKnown RBP eCLIP28.51■■■□□ 2.16
TRNP1-201ENST00000522111 HADHQ16836 314 aaKnown RBP28.51■■■□□ 2.16
TRNP1-201ENST00000522111 HFE2Q6ZVN8 426 aa28.51■■■□□ 2.16
TRNP1-201ENST00000522111 MMGT1Q8N4V1 131 aa28.51■■■□□ 2.16
TRNP1-201ENST00000522111 ATAD1Q8NBU5 361 aa28.51■■■□□ 2.16
TRNP1-201ENST00000522111 NAP1L3Q99457 506 aaPredicted RBP28.51■■■□□ 2.16
TRNP1-201ENST00000522111 OR6C75A6NL08 312 aa28.51■■■□□ 2.15
TRNP1-201ENST00000522111 HSF2BPO75031 334 aa28.51■■■□□ 2.15
TRNP1-201ENST00000522111 CAPN15O75808 1086 aa28.51■■■□□ 2.15
TRNP1-201ENST00000522111 SCNN1AP37088 669 aa28.51■■■□□ 2.15
TRNP1-201ENST00000522111 NFE2Q16621 373 aaPredicted RBP28.51■■■□□ 2.15
TRNP1-201ENST00000522111 KCTD19Q17RG1 926 aaPredicted RBP28.51■■■□□ 2.15
TRNP1-201ENST00000522111 ODF2Q5BJF6 829 aa28.51■■■□□ 2.15
TRNP1-201ENST00000522111 ANKS1BQ7Z6G8 1248 aa28.51■■■□□ 2.15
TRNP1-201ENST00000522111 SLC13A5Q86YT5 568 aaPredicted RBP28.51■■■□□ 2.15
TRNP1-201ENST00000522111 CMTR2Q8IYT2 770 aaKnown RBP28.51■■■□□ 2.15
TRNP1-201ENST00000522111 DEFB106AQ8N104 65 aa28.51■■■□□ 2.15
TRNP1-201ENST00000522111 TTC9BQ8N6N2 239 aa28.51■■■□□ 2.15
TRNP1-201ENST00000522111 GPR161Q8N6U8 529 aaKnown RBP28.51■■■□□ 2.15
TRNP1-201ENST00000522111 HERPUD2Q9BSE4 406 aa28.51■■■□□ 2.15
TRNP1-201ENST00000522111 LRRC1Q9BTT6 524 aa28.51■■■□□ 2.15
TRNP1-201ENST00000522111 HEMGNQ9BXL5 484 aa28.51■■■□□ 2.15
TRNP1-201ENST00000522111 ADAM33Q9BZ11 813 aa28.51■■■□□ 2.15
TRNP1-201ENST00000522111 DDX47Q9H0S4 455 aaKnown RBP28.51■■■□□ 2.15
TRNP1-201ENST00000522111 USP18Q9UMW8 372 aa28.51■■■□□ 2.15
TRNP1-201ENST00000522111 YJEFN3A6XGL0 299 aa28.5■■■□□ 2.15
TRNP1-201ENST00000522111 E7ENQ6 273 aa28.5■■■□□ 2.15
TRNP1-201ENST00000522111 DPYSL4O14531 572 aa28.5■■■□□ 2.15
TRNP1-201ENST00000522111 RPL17P18621 184 aaKnown RBP28.5■■■□□ 2.15
TRNP1-201ENST00000522111 DAOAP59103 153 aa28.5■■■□□ 2.15
TRNP1-201ENST00000522111 YWHAZP63104 245 aaKnown RBP28.5■■■□□ 2.15
TRNP1-201ENST00000522111 DCAF6Q58WW2 860 aa28.5■■■□□ 2.15
TRNP1-201ENST00000522111 LRRC38Q5VT99 294 aa28.5■■■□□ 2.15
TRNP1-201ENST00000522111 SDHAF4Q5VUM1 108 aa28.5■■■□□ 2.15
TRNP1-201ENST00000522111 SCYL2Q6P3W7 929 aa28.5■■■□□ 2.15
TRNP1-201ENST00000522111 ANKS3Q6ZW76 656 aa28.5■■■□□ 2.15
TRNP1-201ENST00000522111 EXD1Q8NHP7 514 aa28.5■■■□□ 2.15
TRNP1-201ENST00000522111 SCAMP5Q8TAC9 235 aa28.5■■■□□ 2.15
TRNP1-201ENST00000522111 RIN2Q8WYP3 895 aaPredicted RBP28.5■■■□□ 2.15
TRNP1-201ENST00000522111 PEBP4Q96S96 227 aa28.5■■■□□ 2.15
TRNP1-201ENST00000522111 CNGB3Q9NQW8 809 aa28.5■■■□□ 2.15
TRNP1-201ENST00000522111 CDY1Q9Y6F8 540 aa28.5■■■□□ 2.15
TRNP1-201ENST00000522111 ZBED1O96006 694 aa28.5■■■□□ 2.15
TRNP1-201ENST00000522111 GPR15P49685 360 aa28.5■■■□□ 2.15
TRNP1-201ENST00000522111 ACAP1Q15027 740 aa28.5■■■□□ 2.15
TRNP1-201ENST00000522111 USP41Q3LFD5 358 aa28.5■■■□□ 2.15
TRNP1-201ENST00000522111 KIAA1841Q6NSI8 718 aa28.5■■■□□ 2.15
TRNP1-201ENST00000522111 ZDHHC14Q8IZN3 488 aa28.5■■■□□ 2.15
TRNP1-201ENST00000522111 RAPGEF5Q92565 580 aa28.5■■■□□ 2.15
TRNP1-201ENST00000522111 TMEM169Q96HH4 297 aa28.5■■■□□ 2.15
TRNP1-201ENST00000522111 UBXN6Q9BZV1 441 aa28.5■■■□□ 2.15
TRNP1-201ENST00000522111 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP28.5■■■□□ 2.15
TRNP1-201ENST00000522111 ZMYND8Q9ULU4 1186 aaPredicted RBP28.5■■■□□ 2.15
TRNP1-201ENST00000522111 PCDHB5Q9Y5E4 795 aa28.5■■■□□ 2.15
TRNP1-201ENST00000522111 PATJQ8NI35 1801 aa28.5■■■□□ 2.15
TRNP1-201ENST00000522111 LRRD1A4D1F6 860 aa28.49■■■□□ 2.15
TRNP1-201ENST00000522111 FBXO21O94952 628 aa28.49■■■□□ 2.15
TRNP1-201ENST00000522111 RALAP11233 206 aa28.49■■■□□ 2.15
TRNP1-201ENST00000522111 ATXN1P54253 815 aaKnown RBP28.49■■■□□ 2.15
TRNP1-201ENST00000522111 TUBB4BP68371 445 aa28.49■■■□□ 2.15
TRNP1-201ENST00000522111 C8orf74Q6P047 294 aa28.49■■■□□ 2.15
TRNP1-201ENST00000522111 POLNQ7Z5Q5 900 aa28.49■■■□□ 2.15
TRNP1-201ENST00000522111 COLGALT1Q8NBJ5 622 aa28.49■■■□□ 2.15
TRNP1-201ENST00000522111 HSPH1Q92598 858 aa28.49■■■□□ 2.15
TRNP1-201ENST00000522111 PNKPQ96T60 521 aa28.49■■■□□ 2.15
TRNP1-201ENST00000522111 H7C4K7 107 aa28.48■■■□□ 2.15
TRNP1-201ENST00000522111 SLC7A5Q01650 507 aa28.48■■■□□ 2.15
TRNP1-201ENST00000522111 DDR2Q16832 855 aa28.48■■■□□ 2.15
TRNP1-201ENST00000522111 SLC39A11Q8N1S5 342 aa28.48■■■□□ 2.15
TRNP1-201ENST00000522111 HDAC7Q8WUI4 952 aa28.48■■■□□ 2.15
TRNP1-201ENST00000522111 ZBED2Q9BTP6 218 aa28.48■■■□□ 2.15
TRNP1-201ENST00000522111 PARD6BQ9BYG5 372 aa28.48■■■□□ 2.15
TRNP1-201ENST00000522111 KIAA1671Q9BY89 1806 aa28.48■■■□□ 2.15
TRNP1-201ENST00000522111 SOAT2O75908 522 aa28.48■■■□□ 2.15
TRNP1-201ENST00000522111 TRUB2O95900 331 aaKnown RBP28.48■■■□□ 2.15
TRNP1-201ENST00000522111 EFEMP2O95967 443 aa28.48■■■□□ 2.15
TRNP1-201ENST00000522111 KRT7P08729 469 aa28.48■■■□□ 2.15
TRNP1-201ENST00000522111 DESP17661 470 aa28.48■■■□□ 2.15
TRNP1-201ENST00000522111 LAG3P18627 525 aa28.48■■■□□ 2.15
TRNP1-201ENST00000522111 PCK1P35558 622 aa28.48■■■□□ 2.15
TRNP1-201ENST00000522111 MATKP42679 507 aa28.48■■■□□ 2.15
TRNP1-201ENST00000522111 SLC5A3P53794 718 aa28.48■■■□□ 2.15
TRNP1-201ENST00000522111 TMEM240Q5SV17 173 aa28.48■■■□□ 2.15
TRNP1-201ENST00000522111 MFSD7Q6UXD7 560 aa28.48■■■□□ 2.15
TRNP1-201ENST00000522111 RNF19BQ6ZMZ0 732 aa28.48■■■□□ 2.15
TRNP1-201ENST00000522111 SLITRK1Q96PX8 696 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms