RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 CYP26A1O43174 497 aa21.79■■□□□ 1.08
TRIM35-203ENST00000521253 COCHO43405 550 aa21.79■■□□□ 1.08
TRIM35-203ENST00000521253 PAEPP09466 180 aa21.79■■□□□ 1.08
TRIM35-203ENST00000521253 VDRP11473 427 aa21.79■■□□□ 1.08
TRIM35-203ENST00000521253 TCF3P15923 654 aa21.79■■□□□ 1.08
TRIM35-203ENST00000521253 KPNA1P52294 538 aaPredicted RBP21.79■■□□□ 1.08
TRIM35-203ENST00000521253 KIF11P52732 1056 aa21.79■■□□□ 1.08
TRIM35-203ENST00000521253 MAN2A1Q16706 1144 aa21.79■■□□□ 1.08
TRIM35-203ENST00000521253 HECTD3Q5T447 861 aa21.79■■□□□ 1.08
TRIM35-203ENST00000521253 TRIM65Q6PJ69 517 aa21.79■■□□□ 1.08
TRIM35-203ENST00000521253 GBP6Q6ZN66 633 aa21.79■■□□□ 1.08
TRIM35-203ENST00000521253 DTWD2Q8NBA8 298 aa21.79■■□□□ 1.08
TRIM35-203ENST00000521253 FAM3CQ92520 227 aa21.79■■□□□ 1.08
TRIM35-203ENST00000521253 NELL2Q99435 816 aa21.79■■□□□ 1.08
TRIM35-203ENST00000521253 OSBPL6Q9BZF3 934 aa21.79■■□□□ 1.08
TRIM35-203ENST00000521253 EBF3Q9H4W6 596 aa21.79■■□□□ 1.08
TRIM35-203ENST00000521253 C8orf33Q9H7E9 229 aaPredicted RBP21.79■■□□□ 1.08
TRIM35-203ENST00000521253 CCSER2Q9H7U1 834 aa21.79■■□□□ 1.08
TRIM35-203ENST00000521253 HPS4Q9NQG7 708 aa21.79■■□□□ 1.08
TRIM35-203ENST00000521253 SAMSN1Q9NSI8 373 aaKnown RBP21.79■■□□□ 1.08
TRIM35-203ENST00000521253 SMPD4Q9NXE4 827 aa21.79■■□□□ 1.08
TRIM35-203ENST00000521253 MRPS17Q9Y2R5 130 aaKnown RBP21.79■■□□□ 1.08
TRIM35-203ENST00000521253 NFE2L3Q9Y4A8 694 aa21.79■■□□□ 1.08
TRIM35-203ENST00000521253 CPQQ9Y646 472 aa21.79■■□□□ 1.08
TRIM35-203ENST00000521253 ZNF638Q14966 1978 aaKnown RBP21.79■■□□□ 1.08
TRIM35-203ENST00000521253 LEFTY2O00292 366 aa21.78■■□□□ 1.08
TRIM35-203ENST00000521253 O00370 1275 aa21.78■■□□□ 1.08
TRIM35-203ENST00000521253 MBL2P11226 248 aaPredicted RBP21.78■■□□□ 1.08
TRIM35-203ENST00000521253 ARSAP15289 507 aa21.78■■□□□ 1.08
TRIM35-203ENST00000521253 SLC9A1P19634 815 aa21.78■■□□□ 1.08
TRIM35-203ENST00000521253 TUBP50607 506 aa21.78■■□□□ 1.08
TRIM35-203ENST00000521253 ITPRIPL2Q3MIP1 535 aa21.78■■□□□ 1.08
TRIM35-203ENST00000521253 SASS6Q6UVJ0 657 aa21.78■■□□□ 1.08
TRIM35-203ENST00000521253 PIGZQ86VD9 579 aa21.78■■□□□ 1.08
TRIM35-203ENST00000521253 ZNF687Q8N1G0 1237 aa21.78■■□□□ 1.08
TRIM35-203ENST00000521253 RBBP8NLQ8NC74 664 aaPredicted RBP21.78■■□□□ 1.08
TRIM35-203ENST00000521253 ENOX1Q8TC92 643 aaKnown RBP21.78■■□□□ 1.08
TRIM35-203ENST00000521253 TFAP2BQ92481 460 aa21.78■■□□□ 1.08
TRIM35-203ENST00000521253 MSANTD3Q96H12 275 aa21.78■■□□□ 1.08
TRIM35-203ENST00000521253 TUBGCP2Q9BSJ2 902 aa21.78■■□□□ 1.08
TRIM35-203ENST00000521253 UBXN6Q9BZV1 441 aa21.78■■□□□ 1.08
TRIM35-203ENST00000521253 UBE2TQ9NPD8 197 aaPredicted RBP21.78■■□□□ 1.08
TRIM35-203ENST00000521253 TLR8Q9NR97 1041 aaKnown RBP21.78■■□□□ 1.08
TRIM35-203ENST00000521253 NDRG2Q9UN36 371 aaKnown RBP21.78■■□□□ 1.08
TRIM35-203ENST00000521253 WNT6Q9Y6F9 365 aa21.78■■□□□ 1.08
TRIM35-203ENST00000521253 TICRRQ7Z2Z1 1910 aa21.78■■□□□ 1.08
TRIM35-203ENST00000521253 GTPBP10A4D1E9 387 aaKnown RBP21.77■■□□□ 1.08
TRIM35-203ENST00000521253 OTOL1A6NHN0 477 aaPredicted RBP21.77■■□□□ 1.08
TRIM35-203ENST00000521253 SPECC1L-ADORA2AF8WAN1 911 aa21.77■■□□□ 1.08
TRIM35-203ENST00000521253 CTHP32929 405 aa21.77■■□□□ 1.08
TRIM35-203ENST00000521253 ZNF132P52740 706 aa21.77■■□□□ 1.08
TRIM35-203ENST00000521253 BCAT1P54687 386 aa21.77■■□□□ 1.08
TRIM35-203ENST00000521253 PTPN5P54829 565 aa21.77■■□□□ 1.08
TRIM35-203ENST00000521253 SLC8A3P57103 927 aa21.77■■□□□ 1.08
TRIM35-203ENST00000521253 APBA1Q02410 837 aa21.77■■□□□ 1.08
TRIM35-203ENST00000521253 PDE4CQ08493 712 aa21.77■■□□□ 1.08
TRIM35-203ENST00000521253 RUNX3Q13761 415 aa21.77■■□□□ 1.08
TRIM35-203ENST00000521253 PDGFRLQ15198 375 aa21.77■■□□□ 1.08
TRIM35-203ENST00000521253 EXOC3L4Q17RC7 722 aa21.77■■□□□ 1.08
TRIM35-203ENST00000521253 MIIPQ5JXC2 388 aa21.77■■□□□ 1.08
TRIM35-203ENST00000521253 GJB7Q6PEY0 223 aa21.77■■□□□ 1.08
TRIM35-203ENST00000521253 TXNDC11Q6PKC3 985 aa21.77■■□□□ 1.08
TRIM35-203ENST00000521253 C11orf57Q6ZUT1 292 aaPredicted RBP21.77■■□□□ 1.08
TRIM35-203ENST00000521253 OSCP1Q8WVF1 389 aa21.77■■□□□ 1.08
TRIM35-203ENST00000521253 ZSWIM1Q9BR11 485 aa21.77■■□□□ 1.08
TRIM35-203ENST00000521253 NMUR1Q9HB89 426 aa21.77■■□□□ 1.08
TRIM35-203ENST00000521253 DUS2Q9NX74 493 aaKnown RBP21.77■■□□□ 1.08
TRIM35-203ENST00000521253 TMEM63CQ9P1W3 806 aa21.77■■□□□ 1.08
TRIM35-203ENST00000521253 HESX1Q9UBX0 185 aa21.77■■□□□ 1.08
TRIM35-203ENST00000521253 USP3Q9Y6I4 520 aa21.77■■□□□ 1.08
TRIM35-203ENST00000521253 KCNJ18B7U540 433 aa21.76■■□□□ 1.07
TRIM35-203ENST00000521253 TULP2O00295 520 aa21.76■■□□□ 1.07
TRIM35-203ENST00000521253 CALCAP01258 141 aa21.76■■□□□ 1.07
TRIM35-203ENST00000521253 PRKCSHP14314 528 aaPredicted RBP21.76■■□□□ 1.07
TRIM35-203ENST00000521253 FZD5Q13467 585 aa21.76■■□□□ 1.07
TRIM35-203ENST00000521253 KCNJ12Q14500 433 aa21.76■■□□□ 1.07
TRIM35-203ENST00000521253 STX1AQ16623 288 aa21.76■■□□□ 1.07
TRIM35-203ENST00000521253 VWA3BQ502W6 1294 aa21.76■■□□□ 1.07
TRIM35-203ENST00000521253 RALGPS2Q86X27 583 aaPredicted RBP21.76■■□□□ 1.07
TRIM35-203ENST00000521253 UBA3Q8TBC4 463 aa21.76■■□□□ 1.07
TRIM35-203ENST00000521253 CLDN23Q96B33 292 aa21.76■■□□□ 1.07
TRIM35-203ENST00000521253 ZFRQ96KR1 1074 aaKnown RBP21.76■■□□□ 1.07
TRIM35-203ENST00000521253 NDST4Q9H3R1 872 aa21.76■■□□□ 1.07
TRIM35-203ENST00000521253 ANO10Q9NW15 660 aa21.76■■□□□ 1.07
TRIM35-203ENST00000521253 OSER1Q9NX31 292 aa21.76■■□□□ 1.07
TRIM35-203ENST00000521253 APEX2Q9UBZ4 518 aa21.76■■□□□ 1.07
TRIM35-203ENST00000521253 CNTN6Q9UQ52 1028 aa21.76■■□□□ 1.07
TRIM35-203ENST00000521253 PATJQ8NI35 1801 aa21.76■■□□□ 1.07
TRIM35-203ENST00000521253 KIF26AQ9ULI4 1882 aaPredicted RBP21.75■■□□□ 1.07
TRIM35-203ENST00000521253 A0A1W2PQH9 124 aa21.75■■□□□ 1.07
TRIM35-203ENST00000521253 XPO1O14980 1071 aaKnown RBP21.75■■□□□ 1.07
TRIM35-203ENST00000521253 TLR5O60602 858 aa21.75■■□□□ 1.07
TRIM35-203ENST00000521253 BRD2P25440 801 aaKnown RBP21.75■■□□□ 1.07
TRIM35-203ENST00000521253 PON1P27169 355 aa21.75■■□□□ 1.07
TRIM35-203ENST00000521253 IFNAR2P48551 515 aa21.75■■□□□ 1.07
TRIM35-203ENST00000521253 BST2Q10589 180 aaKnown RBP21.75■■□□□ 1.07
TRIM35-203ENST00000521253 EML3Q32P44 896 aa21.75■■□□□ 1.07
TRIM35-203ENST00000521253 PKDCCQ504Y2 493 aa21.75■■□□□ 1.07
TRIM35-203ENST00000521253 TCP11X2Q5H9J9 407 aa21.75■■□□□ 1.07
TRIM35-203ENST00000521253 RAB41Q5JT25 222 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms