RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 HSD17B4P51659 736 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 EPHB1P54762 984 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 ADCY1Q08828 1119 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 ICAM4Q14773 271 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 STXBP2Q15833 593 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 AASDHQ4L235 1098 aaPredicted RBP4.39□□□□□ -1.71
VPS13B-208ENST00000521037 ZBTB41Q5SVQ8 909 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 TDRD10Q5VZ19 366 aaKnown RBP4.39□□□□□ -1.71
VPS13B-208ENST00000521037 TAF2Q6P1X5 1199 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 STOX1Q6ZVD7 989 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 SLC24A5Q71RS6 500 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 TAS1R1Q7RTX1 841 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 KBTBD6Q86V97 674 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 VPS52Q8N1B4 723 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 LZTR1Q8N653 840 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 NSUN6Q8TEA1 469 aaKnown RBP4.39□□□□□ -1.71
VPS13B-208ENST00000521037 OSBP2Q969R2 916 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 PEX11GQ96HA9 241 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 ADAM2Q99965 735 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 SPATA9Q9BWV2 254 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 FTHL17Q9BXU8 183 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 TMEM117Q9H0C3 514 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 PCED1AQ9H1Q7 454 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 PRORYQ9H606 182 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 ELAC1Q9H777 363 aaKnown RBP4.39□□□□□ -1.71
VPS13B-208ENST00000521037 JADE2Q9NQC1 790 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 TMEM161AQ9NX61 479 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 NOB1Q9ULX3 412 aaKnown RBP4.39□□□□□ -1.71
VPS13B-208ENST00000521037 SLC4A4Q9Y6R1 1079 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 CELSR2Q9HCU4 2923 aa4.39□□□□□ -1.71
VPS13B-208ENST00000521037 DOCK6Q96HP0 2047 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 ATG2BQ96BY7 2078 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 CCDC195A0A1B0GUA6 201 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.38□□□□□ -1.71
VPS13B-208ENST00000521037 GOLIM4O00461 696 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 AURKAO14965 403 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 PDHBP11177 359 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 MYCLP1P12525 358 aaPredicted RBP4.38□□□□□ -1.71
VPS13B-208ENST00000521037 BCAR1P56945 870 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 NTHL1P78549 312 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 TFAP4Q01664 338 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 POU4F1Q01851 419 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 UBE3CQ15386 1083 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 NFE2Q16621 373 aaPredicted RBP4.38□□□□□ -1.71
VPS13B-208ENST00000521037 SLC10A6Q3KNW5 377 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 PKN3Q6P5Z2 889 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 Q6ZS52 159 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 TPRG1Q6ZUI0 275 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 DDX53Q86TM3 631 aaKnown RBP4.38□□□□□ -1.71
VPS13B-208ENST00000521037 CABP7Q86V35 215 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 WDR5BQ86VZ2 330 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 FAM228AQ86W67 206 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 LONP2Q86WA8 852 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 DDX42Q86XP3 938 aaKnown RBP eCLIP4.38□□□□□ -1.71
VPS13B-208ENST00000521037 ZNF280BQ86YH2 543 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 TRMT2AQ8IZ69 625 aaKnown RBP4.38□□□□□ -1.71
VPS13B-208ENST00000521037 CHCHD4Q8N4Q1 142 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 TXNDC5Q8NBS9 432 aaKnown RBP4.38□□□□□ -1.71
VPS13B-208ENST00000521037 DEFB124Q8NES8 71 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 MDM1Q8TC05 714 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 PMM1Q92871 262 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 GLG1Q92896 1179 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 IGSF21Q96ID5 467 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 ZC3H10Q96K80 434 aaKnown RBP4.38□□□□□ -1.71
VPS13B-208ENST00000521037 ZNF558Q96NG5 402 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 WWC2-AS2Q96NR7 200 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 INPP4AQ96PE3 977 aaPredicted RBP4.38□□□□□ -1.71
VPS13B-208ENST00000521037 RMDN3Q96TC7 470 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 CELF4Q9BZC1 486 aaKnown RBP4.38□□□□□ -1.71
VPS13B-208ENST00000521037 SEMA4CQ9C0C4 833 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 MAF1Q9H063 256 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 NT5C3AQ9H0P0 336 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 HEBP1Q9NRV9 189 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 ARPP21Q9UBL0 812 aaPredicted RBP4.38□□□□□ -1.71
VPS13B-208ENST00000521037 DKK4Q9UBT3 224 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 MAPRE3Q9UPY8 281 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 CTDP1Q9Y5B0 961 aaPredicted RBP4.38□□□□□ -1.71
VPS13B-208ENST00000521037 DOCK5Q9H7D0 1870 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 DOPEY1Q5JWR5 2465 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 FRMPD4Q14CM0 1322 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 EML5Q05BV3 1969 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 CACNA1EQ15878 2313 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 ITPR3Q14573 2671 aa4.38□□□□□ -1.71
VPS13B-208ENST00000521037 PDZD2O15018 2839 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 WDR81Q562E7 1941 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 SPAARA0A1B0GVQ0 90 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 PATE3B3GLJ2 98 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 B4E1Z4 1266 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 INPPL1O15357 1258 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 TEX28O15482 410 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 GPR42O15529 346 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 CBFA2T2O43439 604 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 SUSD5O60279 629 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 FZD7O75084 574 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 ATP9AO75110 1047 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 MAFO75444 373 aaPredicted RBP4.37□□□□□ -1.71
VPS13B-208ENST00000521037 BCAR3O75815 825 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 CFBP00751 764 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 GALTP07902 379 aa4.37□□□□□ -1.71
VPS13B-208ENST00000521037 FAM153BP0C7A2 387 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms