RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 TMC8Q8IU68 726 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 SCN4BQ8IWT1 228 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 SIX6OS1Q8N1H7 587 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 WDTC1Q8N5D0 677 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 TTC9BQ8N6N2 239 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 CCDC112Q8NEF3 446 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 MAFAQ8NHW3 353 aaPredicted RBP6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 OLIG1Q8TAK6 271 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 E2F7Q96AV8 911 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 C18orf8Q96DM3 657 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 PPP1R13BQ96KQ4 1090 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 CALR3Q96L12 384 aaKnown RBP6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 CCDC42Q96M95 316 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 LPIN3Q9BQK8 851 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 ISCUQ9H1K1 167 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 PIDD1Q9HB75 910 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 IL21Q9HBE4 155 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 ACP6Q9NPH0 428 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 TLR8Q9NR97 1041 aaKnown RBP6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 TMEM30AQ9NV96 361 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 RRN3Q9NYV6 651 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 GDE1Q9NZC3 331 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 ARHGAP20Q9P2F6 1191 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 DNMT3BQ9UBC3 853 aaKnown RBP6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 LCMT1Q9UIC8 334 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 INTUQ9ULD6 942 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 NENFQ9UMX5 172 aa6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 LAMA2P24043 3122 aaKnown RBP6.7□□□□□ -1.34
IGHV4-55-201ENST00000520889 KIF26AQ9ULI4 1882 aaPredicted RBP6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 ANKRD62A6NC57 917 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 ZNF840PA6NDX5 716 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 DDX3XO00571 662 aaKnown RBP eCLIP6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 CCL16O15467 120 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 MBTPS2O43462 519 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 NRDCO43847 1150 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 HSF2BPO75031 334 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 ZBED1O96006 694 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 RHOP08100 348 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 CYLC1P35663 651 aaPredicted RBP6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 TKTL1P51854 596 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 DAOAP59103 153 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 RBM10P98175 930 aaKnown RBP6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 SLC6A3Q01959 620 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 ARID5AQ03989 594 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 DLX2Q07687 328 aaPredicted RBP6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 TAF10Q12962 218 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 MTA1Q13330 715 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 CBX2Q14781 532 aaPredicted RBP6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 TCEAL1Q15170 157 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 SMAD2Q15796 467 aaKnown RBP6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 ARHGAP15Q53QZ3 475 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 TDRD12Q587J7 1177 aaKnown RBP6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 RARS2Q5T160 578 aaKnown RBP6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 DENND1BQ6P3S1 775 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 ALKBH5Q6P6C2 394 aaKnown RBP6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 TOGARAM2Q6ZUX3 1019 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 PDZD4Q76G19 769 aaPredicted RBP6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 SLC26A9Q7LBE3 791 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 TXLNBQ8N3L3 684 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 STKLD1Q8NE28 680 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 UBA3Q8TBC4 463 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 SLC20A1Q8WUM9 679 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 UBE2Q2Q8WVN8 375 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 ATXN2LQ8WWM7 1075 aaKnown RBP6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 MRPS31Q92665 395 aaKnown RBP6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 GOLGA1Q92805 767 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 NXPE3Q969Y0 559 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 MCRS1Q96EZ8 462 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 GCNAQ96QF7 691 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 PCDHB18PQ96TA0 734 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 DEF6Q9H4E7 631 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 TASP1Q9H6P5 420 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 NHEJ1Q9H9Q4 299 aaPredicted RBP6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 LUC7LQ9NQ29 371 aaKnown RBP6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 ABCC13Q9NSE7 274 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 OLA1Q9NTK5 396 aaKnown RBP6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 OBP2AQ9NY56 170 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 TRPM5Q9NZQ8 1165 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 PRKAG3Q9UGI9 489 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 ADAMTS1Q9UHI8 967 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 NAGPAQ9UK23 515 aa6.69□□□□□ -1.34
IGHV4-55-201ENST00000520889 A0A087X0T9 212 aa6.68□□□□□ -1.34
IGHV4-55-201ENST00000520889 TCRBV5S1A1TA0A578 114 aa6.68□□□□□ -1.34
IGHV4-55-201ENST00000520889 GRXCR2A6NFK2 248 aa6.68□□□□□ -1.34
IGHV4-55-201ENST00000520889 EIF3CLB5ME19 914 aaKnown RBP6.68□□□□□ -1.34
IGHV4-55-201ENST00000520889 E5RJQ4 531 aa6.68□□□□□ -1.34
IGHV4-55-201ENST00000520889 TULP2O00295 520 aa6.68□□□□□ -1.34
IGHV4-55-201ENST00000520889 PAPSS1O43252 624 aaPredicted RBP6.68□□□□□ -1.34
IGHV4-55-201ENST00000520889 AKR1B10O60218 316 aa6.68□□□□□ -1.34
IGHV4-55-201ENST00000520889 MOSPD3O75425 235 aa6.68□□□□□ -1.34
IGHV4-55-201ENST00000520889 GABBR2O75899 941 aa6.68□□□□□ -1.34
IGHV4-55-201ENST00000520889 CSPG5O95196 566 aa6.68□□□□□ -1.34
IGHV4-55-201ENST00000520889 OAS1P00973 400 aaKnown RBP6.68□□□□□ -1.34
IGHV4-55-201ENST00000520889 ERBB2P04626 1255 aa6.68□□□□□ -1.34
IGHV4-55-201ENST00000520889 CFHP08603 1231 aa6.68□□□□□ -1.34
IGHV4-55-201ENST00000520889 FAM228BP0C875 321 aa6.68□□□□□ -1.34
IGHV4-55-201ENST00000520889 RALAP11233 206 aa6.68□□□□□ -1.34
IGHV4-55-201ENST00000520889 SKILP12757 684 aa6.68□□□□□ -1.34
IGHV4-55-201ENST00000520889 FSHRP23945 695 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms