RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 KCTD10Q9H3F6 313 aa16.1■□□□□ 0.17
CSMD1-207ENST00000520451 SMOC1Q9H4F8 434 aa16.1■□□□□ 0.17
CSMD1-207ENST00000520451 KRT82Q9NSB4 513 aa16.1■□□□□ 0.17
CSMD1-207ENST00000520451 ANTXRLA6NF34 631 aa16.09■□□□□ 0.17
CSMD1-207ENST00000520451 PDXKO00764 312 aa16.09■□□□□ 0.17
CSMD1-207ENST00000520451 COCHO43405 550 aa16.09■□□□□ 0.17
CSMD1-207ENST00000520451 AP1G2O75843 785 aa16.09■□□□□ 0.17
CSMD1-207ENST00000520451 RHOBTB1O94844 696 aa16.09■□□□□ 0.17
CSMD1-207ENST00000520451 ADH1CP00326 375 aa16.09■□□□□ 0.17
CSMD1-207ENST00000520451 SLC6A11P48066 632 aa16.09■□□□□ 0.17
CSMD1-207ENST00000520451 ORC1Q13415 861 aa16.09■□□□□ 0.17
CSMD1-207ENST00000520451 ZACNQ401N2 412 aa16.09■□□□□ 0.17
CSMD1-207ENST00000520451 PLA2G2CQ5R387 149 aa16.09■□□□□ 0.17
CSMD1-207ENST00000520451 HECTD3Q5T447 861 aa16.09■□□□□ 0.17
CSMD1-207ENST00000520451 CEP135Q66GS9 1140 aa16.09■□□□□ 0.17
CSMD1-207ENST00000520451 ANO7Q6IWH7 933 aa16.09■□□□□ 0.17
CSMD1-207ENST00000520451 RHBDF2Q6PJF5 856 aa16.09■□□□□ 0.17
CSMD1-207ENST00000520451 CCDC33Q8N5R6 958 aa16.09■□□□□ 0.17
CSMD1-207ENST00000520451 CNTNAP3BQ96NU0 1288 aa16.09■□□□□ 0.17
CSMD1-207ENST00000520451 CNTNAP3Q9BZ76 1288 aa16.09■□□□□ 0.17
CSMD1-207ENST00000520451 TPSD1Q9BZJ3 242 aa16.09■□□□□ 0.17
CSMD1-207ENST00000520451 RXFP3Q9NSD7 469 aa16.09■□□□□ 0.17
CSMD1-207ENST00000520451 GMIPQ9P107 970 aa16.09■□□□□ 0.17
CSMD1-207ENST00000520451 TBC1D14Q9P2M4 693 aa16.09■□□□□ 0.17
CSMD1-207ENST00000520451 CHORDC1Q9UHD1 332 aaPredicted RBP16.09■□□□□ 0.17
CSMD1-207ENST00000520451 USP25Q9UHP3 1055 aa16.09■□□□□ 0.17
CSMD1-207ENST00000520451 MMP17Q9ULZ9 603 aa16.09■□□□□ 0.17
CSMD1-207ENST00000520451 KIAA1549LQ6ZVL6 1849 aa16.09■□□□□ 0.17
CSMD1-207ENST00000520451 MYO16Q9Y6X6 1858 aa16.09■□□□□ 0.17
CSMD1-207ENST00000520451 EML5Q05BV3 1969 aa16.09■□□□□ 0.17
CSMD1-207ENST00000520451 E2F8A0AVK6 867 aa16.08■□□□□ 0.16
CSMD1-207ENST00000520451 TNFRSF10BO14763 440 aa16.08■□□□□ 0.16
CSMD1-207ENST00000520451 RPN1P04843 607 aaKnown RBP16.08■□□□□ 0.16
CSMD1-207ENST00000520451 APODP05090 189 aa16.08■□□□□ 0.16
CSMD1-207ENST00000520451 ADRB1P08588 477 aa16.08■□□□□ 0.16
CSMD1-207ENST00000520451 ADH5P11766 374 aa16.08■□□□□ 0.16
CSMD1-207ENST00000520451 CCDC130P13994 396 aa16.08■□□□□ 0.16
CSMD1-207ENST00000520451 CMA1P23946 247 aa16.08■□□□□ 0.16
CSMD1-207ENST00000520451 GBP1P32455 592 aa16.08■□□□□ 0.16
CSMD1-207ENST00000520451 NDST1P52848 882 aa16.08■□□□□ 0.16
CSMD1-207ENST00000520451 LIMK1P53667 647 aa16.08■□□□□ 0.16
CSMD1-207ENST00000520451 MRPS21P82921 87 aaKnown RBP16.08■□□□□ 0.16
CSMD1-207ENST00000520451 KDSRQ06136 332 aa16.08■□□□□ 0.16
CSMD1-207ENST00000520451 MESP2Q0VG99 397 aa16.08■□□□□ 0.16
CSMD1-207ENST00000520451 SGSM1Q2NKQ1 1148 aa16.08■□□□□ 0.16
CSMD1-207ENST00000520451 C12orf40Q86WS4 652 aa16.08■□□□□ 0.16
CSMD1-207ENST00000520451 SFTPA1Q8IWL2 248 aa16.08■□□□□ 0.16
CSMD1-207ENST00000520451 FUKQ8N0W3 1084 aa16.08■□□□□ 0.16
CSMD1-207ENST00000520451 TMC2Q8TDI7 906 aa16.08■□□□□ 0.16
CSMD1-207ENST00000520451 TMEM174Q8WUU8 243 aa16.08■□□□□ 0.16
CSMD1-207ENST00000520451 DDX1Q92499 740 aaKnown RBP16.08■□□□□ 0.16
CSMD1-207ENST00000520451 ZFRQ96KR1 1074 aaKnown RBP16.08■□□□□ 0.16
CSMD1-207ENST00000520451 PNKPQ96T60 521 aa16.08■□□□□ 0.16
CSMD1-207ENST00000520451 CCSER2Q9H7U1 834 aa16.08■□□□□ 0.16
CSMD1-207ENST00000520451 VPS45Q9NRW7 570 aa16.08■□□□□ 0.16
CSMD1-207ENST00000520451 HMGXB4Q9UGU5 601 aa16.08■□□□□ 0.16
CSMD1-207ENST00000520451 INVSQ9Y283 1065 aa16.08■□□□□ 0.16
CSMD1-207ENST00000520451 FRMD4BQ9Y2L6 1034 aa16.08■□□□□ 0.16
CSMD1-207ENST00000520451 SH3BP1Q9Y3L3 701 aa16.08■□□□□ 0.16
CSMD1-207ENST00000520451 TPRP12270 2363 aaKnown RBP16.08■□□□□ 0.16
CSMD1-207ENST00000520451 LAMA1P25391 3075 aa16.08■□□□□ 0.16
CSMD1-207ENST00000520451 CALUO43852 315 aaPredicted RBP16.07■□□□□ 0.16
CSMD1-207ENST00000520451 KAT7O95251 611 aa16.07■□□□□ 0.16
CSMD1-207ENST00000520451 MYL1P05976 194 aa16.07■□□□□ 0.16
CSMD1-207ENST00000520451 EIF2DP41214 584 aaKnown RBP16.07■□□□□ 0.16
CSMD1-207ENST00000520451 PIK3CAP42336 1068 aa16.07■□□□□ 0.16
CSMD1-207ENST00000520451 TUBP50607 506 aa16.07■□□□□ 0.16
CSMD1-207ENST00000520451 CREB5Q02930 508 aa16.07■□□□□ 0.16
CSMD1-207ENST00000520451 USP39Q53GS9 565 aaKnown RBP16.07■□□□□ 0.16
CSMD1-207ENST00000520451 LY6G5CQ5SRR4 150 aa16.07■□□□□ 0.16
CSMD1-207ENST00000520451 STPG1Q5TH74 334 aa16.07■□□□□ 0.16
CSMD1-207ENST00000520451 SNX30Q5VWJ9 437 aa16.07■□□□□ 0.16
CSMD1-207ENST00000520451 SPOPLQ6IQ16 392 aa16.07■□□□□ 0.16
CSMD1-207ENST00000520451 SV2AQ7L0J3 742 aa16.07■□□□□ 0.16
CSMD1-207ENST00000520451 TTC30AQ86WT1 665 aa16.07■□□□□ 0.16
CSMD1-207ENST00000520451 ZMIZ2Q8NF64 920 aa16.07■□□□□ 0.16
CSMD1-207ENST00000520451 SLC2A14Q8TDB8 520 aa16.07■□□□□ 0.16
CSMD1-207ENST00000520451 TAF4BQ92750 862 aa16.07■□□□□ 0.16
CSMD1-207ENST00000520451 CHAMP1Q96JM3 812 aa16.07■□□□□ 0.16
CSMD1-207ENST00000520451 SPATA32Q96LK8 384 aa16.07■□□□□ 0.16
CSMD1-207ENST00000520451 SMOQ99835 787 aa16.07■□□□□ 0.16
CSMD1-207ENST00000520451 NACA2Q9H009 215 aa16.07■□□□□ 0.16
CSMD1-207ENST00000520451 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.07■□□□□ 0.16
CSMD1-207ENST00000520451 ARHGEF4Q9NR80 690 aa16.07■□□□□ 0.16
CSMD1-207ENST00000520451 FAM49BQ9NUQ9 324 aa16.07■□□□□ 0.16
CSMD1-207ENST00000520451 COMMD8Q9NX08 183 aa16.07■□□□□ 0.16
CSMD1-207ENST00000520451 IL37Q9NZH6 218 aa16.07■□□□□ 0.16
CSMD1-207ENST00000520451 HPSEQ9Y251 543 aa16.07■□□□□ 0.16
CSMD1-207ENST00000520451 ACACBO00763 2458 aa16.06■□□□□ 0.16
CSMD1-207ENST00000520451 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.06■□□□□ 0.16
CSMD1-207ENST00000520451 IKBKBO14920 756 aa16.06■□□□□ 0.16
CSMD1-207ENST00000520451 KLF8O95600 359 aaPredicted RBP16.06■□□□□ 0.16
CSMD1-207ENST00000520451 ASS1P00966 412 aaKnown RBP16.06■□□□□ 0.16
CSMD1-207ENST00000520451 HLA-DRAP01903 254 aa16.06■□□□□ 0.16
CSMD1-207ENST00000520451 ZDHHC11BP0C7U3 371 aa16.06■□□□□ 0.16
CSMD1-207ENST00000520451 TIE1P35590 1138 aa16.06■□□□□ 0.16
CSMD1-207ENST00000520451 GRIA2P42262 883 aa16.06■□□□□ 0.16
CSMD1-207ENST00000520451 ASPAP45381 313 aa16.06■□□□□ 0.16
CSMD1-207ENST00000520451 MAP3K7CLP57077 242 aa16.06■□□□□ 0.16
CSMD1-207ENST00000520451 KRT85P78386 507 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms