RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 RETP07949 1114 aa17.09■□□□□ 0.33
IGHV3-42-201ENST00000520410 ASPAP45381 313 aa17.09■□□□□ 0.33
IGHV3-42-201ENST00000520410 DMC1Q14565 340 aa17.09■□□□□ 0.33
IGHV3-42-201ENST00000520410 ZNF394Q53GI3 561 aa17.09■□□□□ 0.33
IGHV3-42-201ENST00000520410 C2orf27AQ580R0 203 aa17.09■□□□□ 0.33
IGHV3-42-201ENST00000520410 UNC93AQ86WB7 457 aa17.09■□□□□ 0.33
IGHV3-42-201ENST00000520410 FUKQ8N0W3 1084 aa17.09■□□□□ 0.33
IGHV3-42-201ENST00000520410 CCDC26Q8TAB7 109 aa17.09■□□□□ 0.33
IGHV3-42-201ENST00000520410 TAS1R2Q8TE23 839 aa17.09■□□□□ 0.33
IGHV3-42-201ENST00000520410 OVCA2Q8WZ82 227 aa17.09■□□□□ 0.33
IGHV3-42-201ENST00000520410 NIF3L1Q9GZT8 377 aa17.09■□□□□ 0.33
IGHV3-42-201ENST00000520410 CCSER2Q9H7U1 834 aa17.09■□□□□ 0.33
IGHV3-42-201ENST00000520410 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.09■□□□□ 0.33
IGHV3-42-201ENST00000520410 PTPRDP23468 1912 aa17.09■□□□□ 0.33
IGHV3-42-201ENST00000520410 HELZP42694 1942 aaKnown RBP17.09■□□□□ 0.33
IGHV3-42-201ENST00000520410 FAM237AA0A1B0GTK4 181 aa17.08■□□□□ 0.32
IGHV3-42-201ENST00000520410 CETN3O15182 167 aa17.08■□□□□ 0.32
IGHV3-42-201ENST00000520410 MAPK13O15264 365 aa17.08■□□□□ 0.32
IGHV3-42-201ENST00000520410 COCHO43405 550 aa17.08■□□□□ 0.32
IGHV3-42-201ENST00000520410 TCF3P15923 654 aa17.08■□□□□ 0.32
IGHV3-42-201ENST00000520410 MXI1P50539 228 aa17.08■□□□□ 0.32
IGHV3-42-201ENST00000520410 DGKEP52429 567 aa17.08■□□□□ 0.32
IGHV3-42-201ENST00000520410 ZXDBP98169 803 aa17.08■□□□□ 0.32
IGHV3-42-201ENST00000520410 PPP3CAQ08209 521 aa17.08■□□□□ 0.32
IGHV3-42-201ENST00000520410 DHCR24Q15392 516 aa17.08■□□□□ 0.32
IGHV3-42-201ENST00000520410 BTBD8Q5XKL5 378 aa17.08■□□□□ 0.32
IGHV3-42-201ENST00000520410 FAM160A2Q8N612 972 aaPredicted RBP17.08■□□□□ 0.32
IGHV3-42-201ENST00000520410 TSTD1Q8NFU3 115 aa17.08■□□□□ 0.32
IGHV3-42-201ENST00000520410 SMOQ99835 787 aa17.08■□□□□ 0.32
IGHV3-42-201ENST00000520410 NT5C1AQ9BXI3 368 aa17.08■□□□□ 0.32
IGHV3-42-201ENST00000520410 FBXO44Q9H4M3 255 aa17.08■□□□□ 0.32
IGHV3-42-201ENST00000520410 TMEM8AQ9HCN3 771 aa17.08■□□□□ 0.32
IGHV3-42-201ENST00000520410 PARD6AQ9NPB6 346 aa17.08■□□□□ 0.32
IGHV3-42-201ENST00000520410 TLR8Q9NR97 1041 aaKnown RBP17.08■□□□□ 0.32
IGHV3-42-201ENST00000520410 TBC1D14Q9P2M4 693 aa17.08■□□□□ 0.32
IGHV3-42-201ENST00000520410 PRR5-ARHGAP8B1AHC4 643 aa17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 STX10O60499 249 aa17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 BEST1O76090 585 aa17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 SMC2O95347 1197 aa17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 APODP05090 189 aa17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 ADH5P11766 374 aa17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 SDHBP21912 280 aa17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 GBP1P32455 592 aa17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 ARHGAP8P85298 464 aa17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 CCDC6Q16204 474 aa17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 ANO4Q32M45 955 aa17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 AASDHQ4L235 1098 aaPredicted RBP17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 C1orf220Q5T0J3 134 aa17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 KRT39Q6A163 491 aa17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 PAQR9Q6ZVX9 377 aa17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 CACNA2D4Q7Z3S7 1137 aa17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 CCDC33Q8N5R6 958 aa17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 C12orf50Q8NA57 414 aaPredicted RBP17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 GAB3Q8WWW8 586 aa17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 SMARCE1Q969G3 411 aa17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 CYFIP2Q96F07 1278 aa17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 TWNKQ96RR1 684 aa17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 TPSD1Q9BZJ3 242 aa17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 APOBEC3GQ9HC16 384 aaKnown RBP17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 SEMA4GQ9NTN9 838 aa17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 HOOK1Q9UJC3 728 aaKnown RBP17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 GREB1Q4ZG55 1949 aa17.07■□□□□ 0.32
IGHV3-42-201ENST00000520410 ANAPC1Q9H1A4 1944 aa17.06■□□□□ 0.32
IGHV3-42-201ENST00000520410 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.06■□□□□ 0.32
IGHV3-42-201ENST00000520410 TLR5O60602 858 aa17.06■□□□□ 0.32
IGHV3-42-201ENST00000520410 APBB3O95704 486 aa17.06■□□□□ 0.32
IGHV3-42-201ENST00000520410 OLFM2O95897 454 aa17.06■□□□□ 0.32
IGHV3-42-201ENST00000520410 ACO1P21399 889 aaKnown RBP17.06■□□□□ 0.32
IGHV3-42-201ENST00000520410 TIE1P35590 1138 aa17.06■□□□□ 0.32
IGHV3-42-201ENST00000520410 OPRD1P41143 372 aa17.06■□□□□ 0.32
IGHV3-42-201ENST00000520410 NUCB2P80303 420 aa17.06■□□□□ 0.32
IGHV3-42-201ENST00000520410 GOLGA8FQ08AF8 430 aa17.06■□□□□ 0.32
IGHV3-42-201ENST00000520410 GOLGA8DPQ0D2H9 430 aa17.06■□□□□ 0.32
IGHV3-42-201ENST00000520410 NFIL3Q16649 462 aa17.06■□□□□ 0.32
IGHV3-42-201ENST00000520410 CAMKK1Q8N5S9 505 aa17.06■□□□□ 0.32
IGHV3-42-201ENST00000520410 NAT16Q8N8M0 369 aa17.06■□□□□ 0.32
IGHV3-42-201ENST00000520410 TMEM174Q8WUU8 243 aa17.06■□□□□ 0.32
IGHV3-42-201ENST00000520410 ERCC4Q92889 916 aaPredicted RBP17.06■□□□□ 0.32
IGHV3-42-201ENST00000520410 HEXIM2Q96MH2 286 aaKnown RBP17.06■□□□□ 0.32
IGHV3-42-201ENST00000520410 PNKPQ96T60 521 aa17.06■□□□□ 0.32
IGHV3-42-201ENST00000520410 ARRDC1-AS1Q9H2J1 176 aa17.06■□□□□ 0.32
IGHV3-42-201ENST00000520410 CYP3A43Q9HB55 503 aa17.06■□□□□ 0.32
IGHV3-42-201ENST00000520410 ARHGEF4Q9NR80 690 aa17.06■□□□□ 0.32
IGHV3-42-201ENST00000520410 COMMD8Q9NX08 183 aa17.06■□□□□ 0.32
IGHV3-42-201ENST00000520410 LSM7Q9UK45 103 aaKnown RBP17.06■□□□□ 0.32
IGHV3-42-201ENST00000520410 INVSQ9Y283 1065 aa17.06■□□□□ 0.32
IGHV3-42-201ENST00000520410 F5P12259 2224 aa17.05■□□□□ 0.32
IGHV3-42-201ENST00000520410 E2F8A0AVK6 867 aa17.05■□□□□ 0.32
IGHV3-42-201ENST00000520410 TNFRSF10BO14763 440 aa17.05■□□□□ 0.32
IGHV3-42-201ENST00000520410 CYP26A1O43174 497 aa17.05■□□□□ 0.32
IGHV3-42-201ENST00000520410 SLC6A11P48066 632 aa17.05■□□□□ 0.32
IGHV3-42-201ENST00000520410 GAD2Q05329 585 aa17.05■□□□□ 0.32
IGHV3-42-201ENST00000520410 EDRF1Q3B7T1 1238 aa17.05■□□□□ 0.32
IGHV3-42-201ENST00000520410 LY6G5CQ5SRR4 150 aa17.05■□□□□ 0.32
IGHV3-42-201ENST00000520410 ISM2Q6H9L7 571 aa17.05■□□□□ 0.32
IGHV3-42-201ENST00000520410 ANO7Q6IWH7 933 aa17.05■□□□□ 0.32
IGHV3-42-201ENST00000520410 PRR23CQ6ZRP0 262 aa17.05■□□□□ 0.32
IGHV3-42-201ENST00000520410 SYT13Q7L8C5 426 aa17.05■□□□□ 0.32
IGHV3-42-201ENST00000520410 GPRIN1Q7Z2K8 1008 aa17.05■□□□□ 0.32
IGHV3-42-201ENST00000520410 KBTBD6Q86V97 674 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms