RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 RGS21Q2M5E4 152 aa12.52□□□□□ -0.4
ERGIC1-208ENST00000520399 C15orf59Q2T9L4 293 aaPredicted RBP12.52□□□□□ -0.4
ERGIC1-208ENST00000520399 WASHC2DQ5SRD0 308 aa12.52□□□□□ -0.4
ERGIC1-208ENST00000520399 GJB7Q6PEY0 223 aa12.52□□□□□ -0.4
ERGIC1-208ENST00000520399 LRRC71Q8N4P6 559 aa12.52□□□□□ -0.4
ERGIC1-208ENST00000520399 MMGT1Q8N4V1 131 aa12.52□□□□□ -0.4
ERGIC1-208ENST00000520399 CERKQ8TCT0 537 aa12.52□□□□□ -0.4
ERGIC1-208ENST00000520399 ATG4CQ96DT6 458 aa12.52□□□□□ -0.4
ERGIC1-208ENST00000520399 OLFM1Q99784 485 aa12.52□□□□□ -0.4
ERGIC1-208ENST00000520399 TSEN34Q9BSV6 310 aaKnown RBP12.52□□□□□ -0.4
ERGIC1-208ENST00000520399 RSAD1Q9HA92 442 aa12.52□□□□□ -0.4
ERGIC1-208ENST00000520399 ALG13Q9NP73 1137 aaKnown RBP12.52□□□□□ -0.4
ERGIC1-208ENST00000520399 PAK5Q9P286 719 aa12.52□□□□□ -0.4
ERGIC1-208ENST00000520399 SMIM31A0A1B0GVY4 71 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 H7C0S8 307 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 AREL1O15033 823 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 ALDH1A2O94788 518 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 NPTXRO95502 500 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 KRT20P35900 424 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 TCF7P36402 384 aaPredicted RBP12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 PDAP1Q13442 181 aaKnown RBP12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 ALFQ53S48 1182 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 WDR93Q6P2C0 686 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 ZBTB8BQ8NAP8 495 aaPredicted RBP12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 FEZF2Q8TBJ5 459 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 PAIP1Q9H074 479 aaKnown RBP12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 RAB6BQ9NRW1 208 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 SMARCAL1Q9NZC9 954 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 GTF2A1LQ9UNN4 478 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 NDUFB5O43674 189 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 ALDH1A1P00352 501 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 DARSP14868 501 aaKnown RBP12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 TROAPQ12815 778 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 TRIP10Q15642 601 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 MAPRE1Q15691 268 aaKnown RBP12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 PLEKHA7Q6IQ23 1121 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 C17orf80Q9BSJ5 609 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 ISCUQ9H1K1 167 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 SPON1Q9HCB6 807 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 HPS4Q9NQG7 708 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 AGPAT3Q9NRZ7 376 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 ATPIF1Q9UII2 106 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 MEGF6O75095 1541 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 ZC3H4Q9UPT8 1303 aaKnown RBP12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 RRN3P2A6NIE6 340 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 AKAP10O43572 662 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 APRTP07741 180 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 RARBP10826 455 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 ATP6V1B1P15313 513 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 TTC39BQ5VTQ0 682 aaPredicted RBP12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 ACAD10Q6JQN1 1059 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 SLC25A24Q6NUK1 477 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 PHACTR1Q9C0D0 580 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 CLEC4MQ9H2X3 399 aaPredicted RBP12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 RPS6KB2Q9UBS0 482 aa12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 DBR1Q9UK59 544 aaKnown RBP12.52□□□□□ -0.41
ERGIC1-208ENST00000520399 TRIM43BA6NCK2 446 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 CNOT3O75175 753 aaKnown RBP12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 CPT1AP50416 773 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 C4orf22Q6V702 233 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 SCAIQ8N9R8 606 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 GMCL1P1Q8NEA9 526 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 RIN2Q8WYP3 895 aaPredicted RBP12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 PI4K2AQ9BTU6 479 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 ROPN1BQ9BZX4 212 aaPredicted RBP12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 ROPN1Q9HAT0 212 aaPredicted RBP12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 KLHL20Q9Y2M5 609 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 RIMBP3CA6NJZ7 1639 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 RIMBP3BA6NNM3 1639 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 RIMBP3Q9UFD9 1639 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 O00370 1275 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 SPAG6O75602 509 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 PTGS2P35354 604 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 IL12RB1P42701 662 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 C16orf89Q6UX73 402 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 NUP93Q8N1F7 819 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 MOSPD2Q8NHP6 518 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 UBA3Q8TBC4 463 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 OSBPL8Q9BZF1 889 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 ARHGEF38Q9NXL2 777 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 ADGRB1O14514 1584 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 GAS2O43903 313 aaKnown RBP12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 ABL2P42684 1182 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 ANXA11P50995 505 aaKnown RBP12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 NOTUMQ6P988 496 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 CMTM5Q96DZ9 223 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 VMP1Q96GC9 406 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 AGAP3Q96P47 875 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 DEFB129Q9H1M3 183 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 CATSPERBQ9H7T0 1116 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 PPLO60437 1756 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 WEE2P0C1S8 567 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 ZNF157P51786 506 aaPredicted RBP12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 ITGA8P53708 1063 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 CSTF3Q12996 717 aaKnown RBP12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 PTK7Q13308 1070 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 PDK1Q15118 436 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 P3H2Q8IVL5 708 aa12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 DCP1BQ8IZD4 617 aaKnown RBP12.51□□□□□ -0.41
ERGIC1-208ENST00000520399 AGR3Q8TD06 166 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms