RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 TYRP1P17643 537 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 ADORA2AP29274 412 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 UQCRC1P31930 480 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 CXCR5P32302 372 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 MAPK10P53779 464 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 SOX10P56693 466 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 TIAL1Q01085 375 aaKnown RBP eCLIP3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 EIF2B5Q13144 721 aaKnown RBP3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 PMS2P11Q13670 270 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 EPHA10Q5JZY3 1008 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 ZNF362Q5T0B9 420 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 TREML2Q5T2D2 321 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 ANKRD16Q6P6B7 361 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 MTHFD1LQ6UB35 978 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 WDR53Q7Z5U6 358 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 KCTD20Q7Z5Y7 419 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 PEG10Q86TG7 708 aaKnown RBP3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 RP9Q8TA86 221 aaKnown RBP3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 CAGE1Q8TC20 777 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 TMEM171Q8WVE6 324 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 ZNF764Q96H86 408 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 SNX27Q96L92 541 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 FAM227BQ96M60 508 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 C17orf80Q9BSJ5 609 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 ARHGEF3Q9NR81 526 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 TMOD4Q9NZQ9 345 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 DKK3Q9UBP4 350 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 PEG3Q9GZU2 1588 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 SALL3Q9BXA9 1300 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 SMARCA4P51532 1647 aa3.92□□□□□ -1.78
HMGB1P41-201ENST00000520234 ZAR1LA6NP61 321 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 M0R3H8 397 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 PSMD9O00233 223 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 SNX2O60749 519 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 TJP3O95049 919 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 BMP5P22003 454 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 PROZP22891 400 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 EEF1GP26641 437 aaKnown RBP3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 LIPAP38571 399 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 MTHFSP49914 203 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 GATMP50440 423 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 PGDP52209 483 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 ITGA8P53708 1063 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 TIRAPP58753 221 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 SIM1P81133 766 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 SP2Q02086 613 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 STK3Q13188 491 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 BIRC2Q13490 618 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 SLC35G1Q2M3R5 365 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 TBC1D25Q3MII6 688 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 PRR16Q569H4 304 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 RRAGBQ5VZM2 374 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 MRNIPQ6NTE8 343 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 PARS2Q7L3T8 475 aaKnown RBP3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 CAND1Q86VP6 1230 aaKnown RBP3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 CYP2W1Q8TAV3 490 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 ZNF566Q969W8 418 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 R3HDM4Q96D70 268 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 LRRC46Q96FV0 321 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 MPHOSPH6Q99547 160 aaKnown RBP3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 GDF15Q99988 308 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 DUSP26Q9BV47 211 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 VN1R3Q9BXE9 311 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 TM7SF3Q9NS93 570 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 FNIP2Q9P278 1114 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 SLC17A6Q9P2U8 582 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 DNAJB11Q9UBS4 358 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 GABRQQ9UN88 632 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 HPSEQ9Y251 543 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 DRG1Q9Y295 367 aaKnown RBP3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 MAN2B2Q9Y2E5 1009 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 COMMD10Q9Y6G5 202 aa3.91□□□□□ -1.78
HMGB1P41-201ENST00000520234 SMARCA2P51531 1590 aa3.9□□□□□ -1.78
HMGB1P41-201ENST00000520234 A0A087WZ62 844 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 LINC00473A8K010 186 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 ADAMTS3O15072 1205 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 PLA2G6O60733 806 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 COQ9O75208 318 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 FESP07332 822 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 FAM163BP0C2L3 166 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 CD19P15391 556 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 NDUFB7P17568 137 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 GABRB3P28472 473 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 SLC5A2P31639 672 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 HSPA7P48741 367 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 CLCN2P51788 898 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 CACNA2D1P54289 1103 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 PDE1AP54750 535 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 TPTEP56180 551 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 COL10A1Q03692 680 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 CLCA4Q14CN2 919 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 LY6KQ17RY6 165 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 MPEG1Q2M385 716 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 FAM153CQ494X1 144 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 FAXCQ5TGI0 409 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 MANEALQ5VSG8 457 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 PAPD7Q5XG87 772 aaKnown RBP3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 SLC9A4Q6AI14 798 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 XRRA1Q6P2D8 792 aa3.9□□□□□ -1.79
HMGB1P41-201ENST00000520234 OLFML1Q6UWY5 402 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms