RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 SNX9Q9Y5X1 595 aa8.38□□□□□ -1.07
CLK4-203ENST00000519583 TRANK1O15050 2925 aa8.38□□□□□ -1.07
CLK4-203ENST00000519583 TMEM191CA6NGB0 347 aa8.38□□□□□ -1.07
CLK4-203ENST00000519583 GOLGA8SH3BPF8 625 aa8.38□□□□□ -1.07
CLK4-203ENST00000519583 M0QYV0 167 aa8.38□□□□□ -1.07
CLK4-203ENST00000519583 TRAPPC3O43617 180 aa8.38□□□□□ -1.07
CLK4-203ENST00000519583 PHF2O75151 1096 aa8.38□□□□□ -1.07
CLK4-203ENST00000519583 GLUD2P49448 558 aa8.38□□□□□ -1.07
CLK4-203ENST00000519583 DR1Q01658 176 aa8.38□□□□□ -1.07
CLK4-203ENST00000519583 ZNF252P-AS1Q0IIN9 211 aa8.38□□□□□ -1.07
CLK4-203ENST00000519583 INCA1Q0VD86 236 aa8.38□□□□□ -1.07
CLK4-203ENST00000519583 ELAVL2Q12926 359 aaKnown RBP8.38□□□□□ -1.07
CLK4-203ENST00000519583 GPS2Q13227 327 aa8.38□□□□□ -1.07
CLK4-203ENST00000519583 DCUN1D2Q6PH85 259 aa8.38□□□□□ -1.07
CLK4-203ENST00000519583 CD300LGQ6UXG3 332 aa8.38□□□□□ -1.07
CLK4-203ENST00000519583 MRPL43Q8N983 215 aaKnown RBP8.38□□□□□ -1.07
CLK4-203ENST00000519583 TSEN2Q8NCE0 465 aaKnown RBP8.38□□□□□ -1.07
CLK4-203ENST00000519583 RIN2Q8WYP3 895 aaPredicted RBP8.38□□□□□ -1.07
CLK4-203ENST00000519583 CAVIN3Q969G5 261 aa8.38□□□□□ -1.07
CLK4-203ENST00000519583 MAGOHBQ96A72 148 aaKnown RBP8.38□□□□□ -1.07
CLK4-203ENST00000519583 ACBD3Q9H3P7 528 aa8.38□□□□□ -1.07
CLK4-203ENST00000519583 MRPL17Q9NRX2 175 aaKnown RBP8.38□□□□□ -1.07
CLK4-203ENST00000519583 IP6K2Q9UHH9 426 aa8.38□□□□□ -1.07
CLK4-203ENST00000519583 PDCD11Q14690 1871 aaKnown RBP8.38□□□□□ -1.07
CLK4-203ENST00000519583 C2orf71A6NGG8 1288 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 BHMG1C9JSJ3 638 aaPredicted RBP8.37□□□□□ -1.07
CLK4-203ENST00000519583 DAPK3O43293 454 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 RARAP10276 462 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 FAM193AP78312 1265 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 OGDHQ02218 1023 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 HYAL1Q12794 435 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 SIX1Q15475 284 aaPredicted RBP8.37□□□□□ -1.07
CLK4-203ENST00000519583 PPP2R5EQ16537 467 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 C9orf57Q5W0N0 161 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 SMYD5Q6GMV2 418 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 CPXM1Q96SM3 734 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 MRPL45Q9BRJ2 306 aaKnown RBP8.37□□□□□ -1.07
CLK4-203ENST00000519583 TRIM31Q9BZY9 425 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 DPH5Q9H2P9 285 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.37□□□□□ -1.07
CLK4-203ENST00000519583 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.37□□□□□ -1.07
CLK4-203ENST00000519583 VDRP11473 427 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 TCF4P15884 667 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 ECHS1P30084 290 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 MAN1A1P33908 653 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 TTC27Q6P3X3 843 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 RHOT1Q8IXI2 618 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 RNF168Q8IYW5 571 aaPredicted RBP8.37□□□□□ -1.07
CLK4-203ENST00000519583 C3orf20Q8ND61 904 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 UBA3Q8TBC4 463 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 HERPUD2Q9BSE4 406 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 TTPALQ9BTX7 342 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 KLHL11Q9NVR0 708 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 UTP11Q9Y3A2 253 aaKnown RBP8.37□□□□□ -1.07
CLK4-203ENST00000519583 PSTPIP1O43586 416 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 EFEMP2O95967 443 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 ERBB2P04626 1255 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 TKTP29401 623 aaKnown RBP8.37□□□□□ -1.07
CLK4-203ENST00000519583 CHRNA3P32297 505 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 PSMC1P62191 440 aaKnown RBP8.37□□□□□ -1.07
CLK4-203ENST00000519583 DSG1Q02413 1049 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 NNTQ13423 1086 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 CUL1Q13616 776 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 SGO2Q562F6 1265 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 RTP2Q5QGT7 225 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 PPP1R15BQ5SWA1 713 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 PRSS55Q6UWB4 352 aaPredicted RBP8.37□□□□□ -1.07
CLK4-203ENST00000519583 DSTYKQ6XUX3 929 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 JAMLQ86YT9 394 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 CCDC50Q8IVM0 306 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 NT5C1AQ9BXI3 368 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 NEUROG2Q9H2A3 272 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 SYNCQ9H7C4 482 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 PRDM6Q9NQX0 595 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 CHST7Q9NS84 486 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 CLDND1Q9NY35 253 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 STRIP2Q9ULQ0 834 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 SSX2IPQ9Y2D8 614 aa8.37□□□□□ -1.07
CLK4-203ENST00000519583 BRWD1Q9NSI6 2320 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 ATG2AQ2TAZ0 1938 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 F8VP50 259 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 CNGA2Q16280 664 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 DUSP6Q16828 381 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 KIAA0319Q5VV43 1072 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 LRRC52Q8N7C0 313 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 C12orf29Q8N999 325 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 EMILIN2Q9BXX0 1053 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.36□□□□□ -1.07
CLK4-203ENST00000519583 NME7Q9Y5B8 376 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 GOLGA6BA6NDN3 693 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 FAM187AA6NFU0 413 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 PIRO00625 290 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 CNPP09543 421 aaKnown RBP8.36□□□□□ -1.07
CLK4-203ENST00000519583 RPL17P18621 184 aaKnown RBP8.36□□□□□ -1.07
CLK4-203ENST00000519583 KLRC2P26717 231 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 PTGIRP43119 386 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 KCNJ1P48048 391 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 AARSP49588 968 aaKnown RBP eCLIP8.36□□□□□ -1.07
CLK4-203ENST00000519583 TAF6P49848 677 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 PDCLQ13371 301 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms