RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 CCNI2Q6ZMN8 369 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 SFR1Q86XK3 245 aa13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 ZSWIM2Q8NEG5 633 aa13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 SAAL1Q96ER3 474 aa13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 ACCSQ96QU6 501 aa13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 DUSP9Q99956 384 aaKnown RBP13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 MTMR12Q9C0I1 747 aa13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 ZDHHC4Q9NPG8 344 aa13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 SMPD4Q9NXE4 827 aa13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 CALCOCO1Q9P1Z2 691 aa13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 ADAMTS20P59510 1910 aa13.17□□□□□ -0.3
TRAPPC9-204ENST00000518723 ASH1LQ9NR48 2969 aaKnown RBP13.16□□□□□ -0.3
TRAPPC9-204ENST00000518723 TBC1D3BA6NDS4 549 aa13.16□□□□□ -0.3
TRAPPC9-204ENST00000518723 SCAMP3O14828 347 aaKnown RBP13.16□□□□□ -0.3
TRAPPC9-204ENST00000518723 SH3BP5O60239 455 aa13.16□□□□□ -0.3
TRAPPC9-204ENST00000518723 ZNF217O75362 1048 aa13.16□□□□□ -0.3
TRAPPC9-204ENST00000518723 FTH1P19P0C7X4 201 aa13.16□□□□□ -0.3
TRAPPC9-204ENST00000518723 WARSP23381 471 aaKnown RBP13.16□□□□□ -0.3
TRAPPC9-204ENST00000518723 DDIT3P35638 169 aa13.16□□□□□ -0.3
TRAPPC9-204ENST00000518723 GAD2Q05329 585 aa13.16□□□□□ -0.3
TRAPPC9-204ENST00000518723 COL28A1Q2UY09 1125 aa13.16□□□□□ -0.3
TRAPPC9-204ENST00000518723 LY6G5CQ5SRR4 150 aa13.16□□□□□ -0.3
TRAPPC9-204ENST00000518723 SLC41A1Q8IVJ1 513 aa13.16□□□□□ -0.3
TRAPPC9-204ENST00000518723 ZNF513Q8N8E2 541 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC9-204ENST00000518723 TERB1Q8NA31 727 aa13.16□□□□□ -0.3
TRAPPC9-204ENST00000518723 OR2I1PQ8NGU4 316 aa13.16□□□□□ -0.3
TRAPPC9-204ENST00000518723 RASSF8Q8NHQ8 419 aa13.16□□□□□ -0.3
TRAPPC9-204ENST00000518723 MYCBPAPQ8TBZ2 947 aa13.16□□□□□ -0.3
TRAPPC9-204ENST00000518723 PCED1BQ96HM7 432 aa13.16□□□□□ -0.3
TRAPPC9-204ENST00000518723 FAM84AQ96KN4 292 aa13.16□□□□□ -0.3
TRAPPC9-204ENST00000518723 CAMK1GQ96NX5 476 aa13.16□□□□□ -0.3
TRAPPC9-204ENST00000518723 FAM124BQ9H5Z6 455 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC9-204ENST00000518723 CCDC86Q9H6F5 360 aaKnown RBP13.16□□□□□ -0.3
TRAPPC9-204ENST00000518723 PDE11AQ9HCR9 933 aa13.16□□□□□ -0.3
TRAPPC9-204ENST00000518723 CD248Q9HCU0 757 aa13.16□□□□□ -0.3
TRAPPC9-204ENST00000518723 STARD13Q9Y3M8 1113 aa13.16□□□□□ -0.3
TRAPPC9-204ENST00000518723 A0A1W2PQF6 199 aa13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 F8VP50 259 aa13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 TULP3O75386 442 aa13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 SEC24BO95487 1268 aa13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 BMP15O95972 392 aa13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 TMEM191BP0C7N4 346 aa13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 HOXB2P14652 356 aa13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 NTSR1P30989 418 aa13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 CYP27A1Q02318 531 aa13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 TAF10Q12962 218 aa13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 TDRD10Q5VZ19 366 aaKnown RBP13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 BTBD8Q5XKL5 378 aa13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 NUDT18Q6ZVK8 323 aa13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 GLRX5Q86SX6 157 aa13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 NAXDQ8IW45 347 aa13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 DEFB119Q8N690 84 aa13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 OVCA2Q8WZ82 227 aa13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 ZNF419Q96HQ0 510 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 HPDLQ96IR7 371 aa13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 ANKRD36BP1Q96IX9 119 aa13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 ZFRQ96KR1 1074 aaKnown RBP13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 HSPA12BQ96MM6 686 aa13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 SLITRK1Q96PX8 696 aa13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 MRPL44Q9H9J2 332 aaKnown RBP13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 INTS13Q9NVM9 706 aa13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 DEC1Q9P2X7 70 aa13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 SUSD2Q9UGT4 822 aa13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 HCN2Q9UL51 889 aa13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 R3HCC1Q9Y3T6 440 aaKnown RBP13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 PCDHB9Q9Y5E1 797 aa13.15□□□□□ -0.3
TRAPPC9-204ENST00000518723 ABL1P00519 1130 aa13.14□□□□□ -0.31
TRAPPC9-204ENST00000518723 MBL2P11226 248 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC9-204ENST00000518723 GAP43P17677 238 aa13.14□□□□□ -0.31
TRAPPC9-204ENST00000518723 NDUFV2P19404 249 aa13.14□□□□□ -0.31
TRAPPC9-204ENST00000518723 GRIN1Q05586 938 aa13.14□□□□□ -0.31
TRAPPC9-204ENST00000518723 ALCAMQ13740 583 aa13.14□□□□□ -0.31
TRAPPC9-204ENST00000518723 PLEKHG6Q3KR16 790 aa13.14□□□□□ -0.31
TRAPPC9-204ENST00000518723 DYMQ7RTS9 669 aa13.14□□□□□ -0.31
TRAPPC9-204ENST00000518723 MIB1Q86YT6 1006 aa13.14□□□□□ -0.31
TRAPPC9-204ENST00000518723 TRIML1Q8N9V2 468 aa13.14□□□□□ -0.31
TRAPPC9-204ENST00000518723 PDZD8Q8NEN9 1154 aa13.14□□□□□ -0.31
TRAPPC9-204ENST00000518723 CBWD1Q9BRT8 395 aa13.14□□□□□ -0.31
TRAPPC9-204ENST00000518723 ZDHHC5Q9C0B5 715 aa13.14□□□□□ -0.31
TRAPPC9-204ENST00000518723 ELOVL4Q9GZR5 314 aa13.14□□□□□ -0.31
TRAPPC9-204ENST00000518723 SCUBE2Q9NQ36 999 aa13.14□□□□□ -0.31
TRAPPC9-204ENST00000518723 OLFML3Q9NRN5 406 aa13.14□□□□□ -0.31
TRAPPC9-204ENST00000518723 DKK4Q9UBT3 224 aa13.14□□□□□ -0.31
TRAPPC9-204ENST00000518723 APOBEC2Q9Y235 224 aaKnown RBP13.14□□□□□ -0.31
TRAPPC9-204ENST00000518723 PCDHB13Q9Y5F0 798 aa13.14□□□□□ -0.31
TRAPPC9-204ENST00000518723 PTPRJQ12913 1337 aa13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 MYO18AQ92614 2054 aaKnown RBP13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 GOLGA8IPA6NC78 632 aa13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 GOLGA8JA6NMD2 632 aa13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 TULP1O00294 542 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 ZBTB24O43167 697 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 COCHO43405 550 aa13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 CBFA2T3O75081 653 aa13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 GCNT3O95395 438 aa13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 PDGFRBP09619 1106 aa13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 FAM163BP0C2L3 166 aa13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 MDH1BQ5I0G3 518 aa13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 C10orf76Q5T2E6 689 aa13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 SYCP2LQ5T4T6 812 aa13.13□□□□□ -0.31
TRAPPC9-204ENST00000518723 SNX30Q5VWJ9 437 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms