RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 ACKR2O00590 384 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 CDX4O14627 284 aaPredicted RBP6.58□□□□□ -1.36
PABPC1-207ENST00000518716 MEFVO15553 781 aaPredicted RBP6.58□□□□□ -1.36
PABPC1-207ENST00000518716 RPP40O75818 363 aaKnown RBP6.58□□□□□ -1.36
PABPC1-207ENST00000518716 GCFC2P16383 781 aaKnown RBP6.58□□□□□ -1.36
PABPC1-207ENST00000518716 GJA1P17302 382 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 CSRP1P21291 193 aaKnown RBP6.58□□□□□ -1.36
PABPC1-207ENST00000518716 BRCC3P46736 316 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 CYP4A11Q02928 519 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 TEAD2Q15562 447 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 KCNMB1Q16558 191 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 CYP27C1Q4G0S4 372 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 CYP4A22Q5TCH4 519 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 EEF1DP3Q658K8 133 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 TCEAL6Q6IPX3 200 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 Q6ZUG5 572 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 PDZD4Q76G19 769 aaPredicted RBP6.58□□□□□ -1.36
PABPC1-207ENST00000518716 CEP68Q76N32 757 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 NOSTRINQ8IVI9 506 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 LEMD2Q8NC56 503 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 TCEAL3Q969E4 200 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 UROC1Q96N76 676 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 AIFM3Q96NN9 605 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 EIF2AK1Q9BQI3 630 aaKnown RBP6.58□□□□□ -1.36
PABPC1-207ENST00000518716 GPR88Q9GZN0 384 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 POLR3FQ9H1D9 316 aaPredicted RBP6.58□□□□□ -1.36
PABPC1-207ENST00000518716 DUSP15Q9H1R2 295 aaPredicted RBP6.58□□□□□ -1.36
PABPC1-207ENST00000518716 DNAJC25Q9H1X3 360 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 SMOC1Q9H4F8 434 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 CYP4F11Q9HBI6 524 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 NCOA5Q9HCD5 579 aaKnown RBP6.58□□□□□ -1.36
PABPC1-207ENST00000518716 GPRC5CQ9NQ84 441 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 STIM2Q9P246 746 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 AFF4Q9UHB7 1163 aaKnown RBP6.58□□□□□ -1.36
PABPC1-207ENST00000518716 EGFL7Q9UHF1 273 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 FBXL5Q9UKA1 691 aa6.58□□□□□ -1.36
PABPC1-207ENST00000518716 PDCD11Q14690 1871 aaKnown RBP6.58□□□□□ -1.36
PABPC1-207ENST00000518716 URB1O60287 2271 aaKnown RBP6.57□□□□□ -1.36
PABPC1-207ENST00000518716 NUP205Q92621 2012 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 SMIM28A0A1B0GU29 152 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 BCLAF3A2AJT9 711 aaKnown RBP6.57□□□□□ -1.36
PABPC1-207ENST00000518716 SLC38A8A6NNN8 435 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 C4orf47A7E2U8 309 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 SYN3O14994 580 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 N4BP3O15049 544 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 TRAPPC3O43617 180 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 NRDCO43847 1150 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 LRG1P02750 347 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 INHBBP09529 407 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 CEACAM1P13688 526 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 MAOBP27338 520 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 MPLP40238 635 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 ASPAP45381 313 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 AKAP17AQ02040 695 aaKnown RBP6.57□□□□□ -1.36
PABPC1-207ENST00000518716 PON2Q15165 354 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 TMEM196Q5HYL7 178 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 EARS2Q5JPH6 523 aaKnown RBP6.57□□□□□ -1.36
PABPC1-207ENST00000518716 NT5DC1Q5TFE4 455 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 FSTL4Q6MZW2 842 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 XKR5Q6UX68 686 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 SYDE1Q6ZW31 735 aaPredicted RBP6.57□□□□□ -1.36
PABPC1-207ENST00000518716 GAREM2Q75VX8 874 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 NEK8Q86SG6 692 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 ARID3BQ8IVW6 561 aaPredicted RBP6.57□□□□□ -1.36
PABPC1-207ENST00000518716 TPH2Q8IWU9 490 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 ZMAT2Q96NC0 199 aaKnown RBP6.57□□□□□ -1.36
PABPC1-207ENST00000518716 SCNM1Q9BWG6 230 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 PTPRHQ9HD43 1115 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 PRDM7Q9NQW5 492 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 POLR3BQ9NW08 1133 aaPredicted RBP6.57□□□□□ -1.36
PABPC1-207ENST00000518716 OBP2AQ9NY56 170 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 GTSE1Q9NYZ3 720 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 AP4E1Q9UPM8 1137 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 KNTC1P50748 2209 aa6.57□□□□□ -1.36
PABPC1-207ENST00000518716 NBEAQ8NFP9 2946 aa6.56□□□□□ -1.36
PABPC1-207ENST00000518716 KIF26AQ9ULI4 1882 aaPredicted RBP6.56□□□□□ -1.36
PABPC1-207ENST00000518716 A0A087WWV3 80 aa6.56□□□□□ -1.36
PABPC1-207ENST00000518716 LNP1A1A4G5 178 aa6.56□□□□□ -1.36
PABPC1-207ENST00000518716 OTOL1A6NHN0 477 aaPredicted RBP6.56□□□□□ -1.36
PABPC1-207ENST00000518716 ABLIM1O14639 778 aa6.56□□□□□ -1.36
PABPC1-207ENST00000518716 PRRG1O14668 218 aa6.56□□□□□ -1.36
PABPC1-207ENST00000518716 TRDMT1O14717 391 aaKnown RBP6.56□□□□□ -1.36
PABPC1-207ENST00000518716 TPD52L2O43399 206 aaKnown RBP6.56□□□□□ -1.36
PABPC1-207ENST00000518716 FAM13AO94988 1023 aa6.56□□□□□ -1.36
PABPC1-207ENST00000518716 OAZ2O95190 189 aa6.56□□□□□ -1.36
PABPC1-207ENST00000518716 DEXIO95424 95 aa6.56□□□□□ -1.36
PABPC1-207ENST00000518716 KCNE1P15382 129 aa6.56□□□□□ -1.36
PABPC1-207ENST00000518716 RPS6KB1P23443 525 aa6.56□□□□□ -1.36
PABPC1-207ENST00000518716 ELF1P32519 619 aa6.56□□□□□ -1.36
PABPC1-207ENST00000518716 HSPA4P34932 840 aa6.56□□□□□ -1.36
PABPC1-207ENST00000518716 PXNP49023 591 aaPredicted RBP6.56□□□□□ -1.36
PABPC1-207ENST00000518716 NOVA1P51513 510 aaKnown RBP6.56□□□□□ -1.36
PABPC1-207ENST00000518716 KPNA1P52294 538 aaPredicted RBP6.56□□□□□ -1.36
PABPC1-207ENST00000518716 CCT2P78371 535 aaKnown RBP6.56□□□□□ -1.36
PABPC1-207ENST00000518716 TNK2Q07912 1038 aa6.56□□□□□ -1.36
PABPC1-207ENST00000518716 ZNF252P-AS1Q0IIN9 211 aa6.56□□□□□ -1.36
PABPC1-207ENST00000518716 TWF1Q12792 350 aa6.56□□□□□ -1.36
PABPC1-207ENST00000518716 PRPF4BQ13523 1007 aaKnown RBP6.56□□□□□ -1.36
PABPC1-207ENST00000518716 TOB2Q14106 344 aaPredicted RBP6.56□□□□□ -1.36
PABPC1-207ENST00000518716 MAPK6Q16659 721 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms