RNA–Protein interactions for RNA: ENST00000518542.1

CSGALNACT1-206, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-206ENST00000518542 GPR88Q9GZN0 384 aa8.12□□□□□ -1.11
CSGALNACT1-206ENST00000518542 NUCKS1Q9H1E3 243 aaKnown RBP8.12□□□□□ -1.11
CSGALNACT1-206ENST00000518542 PDCL3Q9H2J4 239 aa8.12□□□□□ -1.11
CSGALNACT1-206ENST00000518542 FBXO44Q9H4M3 255 aa8.12□□□□□ -1.11
CSGALNACT1-206ENST00000518542 CSNK1G1Q9HCP0 422 aa8.12□□□□□ -1.11
CSGALNACT1-206ENST00000518542 WDR6Q9NNW5 1121 aaKnown RBP8.12□□□□□ -1.11
CSGALNACT1-206ENST00000518542 PNPLA8Q9NP80 782 aa8.12□□□□□ -1.11
CSGALNACT1-206ENST00000518542 AVENQ9NQS1 362 aaPredicted RBP8.12□□□□□ -1.11
CSGALNACT1-206ENST00000518542 COMMD8Q9NX08 183 aa8.12□□□□□ -1.11
CSGALNACT1-206ENST00000518542 DNMT3BQ9UBC3 853 aaKnown RBP8.12□□□□□ -1.11
CSGALNACT1-206ENST00000518542 MAGED2Q9UNF1 606 aaPredicted RBP8.12□□□□□ -1.11
CSGALNACT1-206ENST00000518542 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.12□□□□□ -1.11
CSGALNACT1-206ENST00000518542 CEP83Q9Y592 693 aa8.12□□□□□ -1.11
CSGALNACT1-206ENST00000518542 DENND4AQ7Z401 1863 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 MYO16Q9Y6X6 1858 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 CLUHO75153 1309 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 A0A1W2PQJ5 194 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 XPO1O14980 1071 aaKnown RBP8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 BEST1O76090 585 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 MICAL2O94851 1124 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 PNMA6AP0CW24 399 aaPredicted RBP8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 CYP11B1P15538 503 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 FERP16591 822 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 FSHRP23945 695 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 CDC25CP30307 473 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 PPP3CCP48454 512 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 CACNA2D1P54289 1103 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 EPHA5P54756 1037 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 PTPN5P54829 565 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 SNX16P57768 344 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 ARID5AQ03989 594 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 IFRD2Q12894 506 aaPredicted RBP8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 SMAD2Q15796 467 aaKnown RBP8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 ARHGAP15Q53QZ3 475 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 SFMBT2Q5VUG0 894 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 SLC47A2Q86VL8 602 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 TTC30AQ86WT1 665 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 ZNF677Q86XU0 584 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 VSTM4Q8IW00 320 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 UBA3Q8TBC4 463 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 CPLX3Q8WVH0 158 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 TRMT2BQ96GJ1 504 aaKnown RBP8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 MYRFLQ96LU7 910 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 NOX5Q96PH1 765 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 SLITRK1Q96PX8 696 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 POMKQ9H5K3 350 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 HCFC1R1Q9NWW0 138 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 TSR3Q9UJK0 312 aaKnown RBP8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 CAPN11Q9UMQ6 739 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 PCDHGC3Q9UN70 934 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 LUC7L2Q9Y383 392 aaKnown RBP8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 MRPS23Q9Y3D9 190 aaKnown RBP8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 NR2E1Q9Y466 385 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 NOTCH4Q99466 2003 aa8.11□□□□□ -1.11
CSGALNACT1-206ENST00000518542 ANAPC1Q9H1A4 1944 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 LRRC53A6NM62 1247 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 TNFRSF10BO14763 440 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 ADCY5O95622 1261 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 CALCAP01258 141 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 HMGA1P17096 107 aaKnown RBP8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 YWHAQP27348 245 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 GABRR2P28476 465 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 GBP2P32456 591 aaPredicted RBP8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 PLA2G4AP47712 749 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 SLC5A3P53794 718 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 NTHL1P78549 312 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 ZBED6P86452 979 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 PDE4CQ08493 712 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 MTMR3Q13615 1198 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 ASIC2Q16515 512 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 PKDCCQ504Y2 493 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 TMEM31Q5JXX7 168 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 GET4Q7L5D6 327 aaPredicted RBP8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 OTOP3Q7RTS5 596 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 PIGZQ86VD9 579 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 SIX6OS1Q8N1H7 587 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 STKLD1Q8NE28 680 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 PDZD8Q8NEN9 1154 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 ZMIZ2Q8NF64 920 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 SCAMP5Q8TAC9 235 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 EPS8L1Q8TE68 723 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 SLC35F5Q8WV83 523 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 KCTD13Q8WZ19 329 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 OVCA2Q8WZ82 227 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 BAP1Q92560 729 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 MRPS31Q92665 395 aaKnown RBP8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 SECISBP2LQ93073 1101 aaKnown RBP8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 FBXO32Q969P5 355 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 ACSF2Q96CM8 615 aaPredicted RBP8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 MRFAP1L1Q96HT8 127 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 HSFY1Q96LI6 401 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 ZSWIM1Q9BR11 485 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 TTLL2Q9BWV7 592 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 PHF7Q9BWX1 381 aaPredicted RBP8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 LRRC3Q9BY71 257 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 FAM117AQ9C073 453 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 TTYH3Q9C0H2 523 aa8.1□□□□□ -1.11
CSGALNACT1-206ENST00000518542 LHX5Q9H2C1 402 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms