RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 TIPARPQ7Z3E1 657 aaKnown RBP3.8□□□□□ -1.8
CPNE3-204ENST00000517862 PHC2Q8IXK0 858 aa3.8□□□□□ -1.8
CPNE3-204ENST00000517862 MINDY1Q8N5J2 469 aa3.8□□□□□ -1.8
CPNE3-204ENST00000517862 CHST14Q8NCH0 376 aa3.8□□□□□ -1.8
CPNE3-204ENST00000517862 OR2I1PQ8NGU4 316 aa3.8□□□□□ -1.8
CPNE3-204ENST00000517862 PCDH19Q8TAB3 1148 aa3.8□□□□□ -1.8
CPNE3-204ENST00000517862 FAM3CQ92520 227 aa3.8□□□□□ -1.8
CPNE3-204ENST00000517862 AHCYL2Q96HN2 611 aaKnown RBP3.8□□□□□ -1.8
CPNE3-204ENST00000517862 ARPC5LQ9BPX5 153 aa3.8□□□□□ -1.8
CPNE3-204ENST00000517862 ALG1Q9BT22 464 aa3.8□□□□□ -1.8
CPNE3-204ENST00000517862 ADAMTS10Q9H324 1103 aa3.8□□□□□ -1.8
CPNE3-204ENST00000517862 IPPKQ9H8X2 491 aa3.8□□□□□ -1.8
CPNE3-204ENST00000517862 CABP5Q9NP86 173 aa3.8□□□□□ -1.8
CPNE3-204ENST00000517862 FSCN3Q9NQT6 498 aa3.8□□□□□ -1.8
CPNE3-204ENST00000517862 OBP2AQ9NY56 170 aa3.8□□□□□ -1.8
CPNE3-204ENST00000517862 VAV3Q9UKW4 847 aa3.8□□□□□ -1.8
CPNE3-204ENST00000517862 COMMD10Q9Y6G5 202 aa3.8□□□□□ -1.8
CPNE3-204ENST00000517862 GOLGA6CA6NDK9 693 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 GOLGA6BA6NDN3 693 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 SERINC4A6NH21 518 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 WASH4PA8MWX3 477 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 XPOTO43592 962 aaKnown RBP3.79□□□□□ -1.8
CPNE3-204ENST00000517862 H2AFYO75367 372 aaKnown RBP3.79□□□□□ -1.8
CPNE3-204ENST00000517862 RFPL1O75677 317 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 FLOT1O75955 427 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 APPP05067 770 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 CFIP05156 583 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 GSNP06396 782 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 GOLGA6DP0CG33 693 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 MYBP10242 640 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 TNFRSF1AP19438 455 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 PROZP22891 400 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 COPB2P35606 906 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 UQCRFS1P47985 274 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 LSSP48449 732 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 DHPSP49366 369 aaPredicted RBP3.79□□□□□ -1.8
CPNE3-204ENST00000517862 SEPHS1P49903 392 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 SCAND1P57086 179 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 KRT83P78385 493 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 PTH1RQ03431 593 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 TNK2Q07912 1038 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 PAK1Q13153 545 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 SLC14A1Q13336 389 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 KLF1Q13351 362 aaPredicted RBP3.79□□□□□ -1.8
CPNE3-204ENST00000517862 HDAC1Q13547 482 aaPredicted RBP3.79□□□□□ -1.8
CPNE3-204ENST00000517862 INAVAQ3KP66 663 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 PDLIM3Q53GG5 364 aaPredicted RBP3.79□□□□□ -1.8
CPNE3-204ENST00000517862 C10orf62Q5T681 223 aaPredicted RBP3.79□□□□□ -1.8
CPNE3-204ENST00000517862 ACBD5Q5T8D3 534 aaPredicted RBP3.79□□□□□ -1.8
CPNE3-204ENST00000517862 PGM2L1Q6PCE3 622 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 OGFOD3Q6PK18 319 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 Q6ZS52 159 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 OVCH1Q7RTY7 1134 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 APBB1IPQ7Z5R6 666 aaPredicted RBP3.79□□□□□ -1.8
CPNE3-204ENST00000517862 SESTD1Q86VW0 696 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 DGKHQ86XP1 1220 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 GLIS1Q8NBF1 620 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 RCBTB1Q8NDN9 531 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 C1orf162Q8NEQ5 155 aaPredicted RBP3.79□□□□□ -1.8
CPNE3-204ENST00000517862 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.79□□□□□ -1.8
CPNE3-204ENST00000517862 ZNF564Q8TBZ8 553 aaPredicted RBP3.79□□□□□ -1.8
CPNE3-204ENST00000517862 PIGOQ8TEQ8 1089 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 USP33Q8TEY7 942 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 DIO2Q92813 273 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 MIB2Q96AX9 1013 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 KCNJ15Q99712 375 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 ORAI3Q9BRQ5 295 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 DUSP23Q9BVJ7 150 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 SLC12A9Q9BXP2 914 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 HDAC8Q9BY41 377 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 CELF4Q9BZC1 486 aaKnown RBP3.79□□□□□ -1.8
CPNE3-204ENST00000517862 KIAA1683Q9H0B3 1180 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 SLC25A18Q9H1K4 315 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 EPB41L4BQ9H329 900 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 PRDM16Q9HAZ2 1276 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 DCP1AQ9NPI6 582 aaPredicted RBP3.79□□□□□ -1.8
CPNE3-204ENST00000517862 ANLNQ9NQW6 1124 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 C1GALT1Q9NS00 363 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 GPR27Q9NS67 375 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 RBM12Q9NTZ6 932 aaKnown RBP3.79□□□□□ -1.8
CPNE3-204ENST00000517862 OXSMQ9NWU1 459 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 GOLGA6AQ9NYA3 693 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 PRR13Q9NZ81 148 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 B4GALT6Q9UBX8 382 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 CBLCQ9ULV8 474 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 PCDHA2Q9Y5H9 948 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 NPFFR2Q9Y5X5 522 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 RYR1P21817 5038 aa3.79□□□□□ -1.8
CPNE3-204ENST00000517862 TGM5O43548 720 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 SPRY1O43609 319 aaPredicted RBP3.78□□□□□ -1.8
CPNE3-204ENST00000517862 PCDHGA12O60330 932 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 GSTM1P09488 218 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 JUPP14923 745 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 KRT15P19012 456 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 CYP7A1P22680 504 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 GATMP50440 423 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 KRT17Q04695 432 aa3.78□□□□□ -1.8
CPNE3-204ENST00000517862 RNASELQ05823 741 aaKnown RBP3.78□□□□□ -1.8
CPNE3-204ENST00000517862 GFPT1Q06210 699 aaPredicted RBP3.78□□□□□ -1.8
CPNE3-204ENST00000517862 LRRC32Q14392 662 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms