RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 ASH1LQ9NR48 2969 aaKnown RBP12.23□□□□□ -0.45
TRAPPC9-203ENST00000517667 PTPRBP23467 1997 aa12.23□□□□□ -0.45
TRAPPC9-203ENST00000517667 PLXNB3Q9ULL4 1909 aa12.23□□□□□ -0.45
TRAPPC9-203ENST00000517667 MYO18AQ92614 2054 aaKnown RBP12.22□□□□□ -0.45
TRAPPC9-203ENST00000517667 E2F8A0AVK6 867 aa12.22□□□□□ -0.45
TRAPPC9-203ENST00000517667 TULP1O00294 542 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC9-203ENST00000517667 SH3BP5O60239 455 aa12.22□□□□□ -0.45
TRAPPC9-203ENST00000517667 GJB3O75712 270 aa12.22□□□□□ -0.45
TRAPPC9-203ENST00000517667 TMEM191BP0C7N4 346 aa12.22□□□□□ -0.45
TRAPPC9-203ENST00000517667 HOXB2P14652 356 aa12.22□□□□□ -0.45
TRAPPC9-203ENST00000517667 GNSP15586 552 aa12.22□□□□□ -0.45
TRAPPC9-203ENST00000517667 PLCG1P19174 1290 aa12.22□□□□□ -0.45
TRAPPC9-203ENST00000517667 BDNFP23560 247 aa12.22□□□□□ -0.45
TRAPPC9-203ENST00000517667 USP46P62068 366 aa12.22□□□□□ -0.45
TRAPPC9-203ENST00000517667 CYP27A1Q02318 531 aa12.22□□□□□ -0.45
TRAPPC9-203ENST00000517667 MCM6Q14566 821 aa12.22□□□□□ -0.45
TRAPPC9-203ENST00000517667 PLEKHG6Q3KR16 790 aa12.22□□□□□ -0.45
TRAPPC9-203ENST00000517667 SYCP2LQ5T4T6 812 aa12.22□□□□□ -0.45
TRAPPC9-203ENST00000517667 PHTF2Q8N3S3 785 aa12.22□□□□□ -0.45
TRAPPC9-203ENST00000517667 CXorf38Q8TB03 319 aa12.22□□□□□ -0.45
TRAPPC9-203ENST00000517667 FOXJ1Q92949 421 aa12.22□□□□□ -0.45
TRAPPC9-203ENST00000517667 C8orf48Q96LL4 319 aa12.22□□□□□ -0.45
TRAPPC9-203ENST00000517667 HSPA12BQ96MM6 686 aa12.22□□□□□ -0.45
TRAPPC9-203ENST00000517667 ZDHHC5Q9C0B5 715 aa12.22□□□□□ -0.45
TRAPPC9-203ENST00000517667 RNF38Q9H0F5 515 aa12.22□□□□□ -0.45
TRAPPC9-203ENST00000517667 ZDHHC4Q9NPG8 344 aa12.22□□□□□ -0.45
TRAPPC9-203ENST00000517667 DEC1Q9P2X7 70 aa12.22□□□□□ -0.45
TRAPPC9-203ENST00000517667 SEL1LQ9UBV2 794 aa12.22□□□□□ -0.45
TRAPPC9-203ENST00000517667 FLNBO75369 2602 aaKnown RBP12.22□□□□□ -0.45
TRAPPC9-203ENST00000517667 IGHV1OR15-9A0A0B4J2B8 117 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 HOXC11O43248 304 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 HCRTO43612 131 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 NDUFS2O75306 463 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 PPP1R37O75864 691 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 ABL1P00519 1130 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 MBL2P11226 248 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 GARTP22102 1010 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 NTSR1P30989 418 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 PSMC1P62191 440 aaKnown RBP12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 WDR45BQ5MNZ6 344 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 LY6G5CQ5SRR4 150 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 C10orf76Q5T2E6 689 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 TDRD10Q5VZ19 366 aaKnown RBP12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 SDE2Q6IQ49 451 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 LIMS2Q7Z4I7 341 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 GLRX5Q86SX6 157 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 SLC41A1Q8IVJ1 513 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 ETFBKMTQ8IXQ9 262 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 RGL4Q8IZJ4 473 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 DEFB119Q8N690 84 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 TRIML1Q8N9V2 468 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 TERB1Q8NA31 727 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 PDZD8Q8NEN9 1154 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 OR2I1PQ8NGU4 316 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 MYCBPAPQ8TBZ2 947 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 CAMK1GQ96NX5 476 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 ACCSQ96QU6 501 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 DUSP9Q99956 384 aaKnown RBP12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 MTMR12Q9C0I1 747 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 CRTAC1Q9NQ79 661 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 KIAA1522Q9P206 1035 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 DKK4Q9UBT3 224 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 SIX4Q9UIU6 781 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 STARD13Q9Y3M8 1113 aa12.21□□□□□ -0.45
TRAPPC9-203ENST00000517667 APC2O95996 2303 aa12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 F8VP50 259 aa12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 SCAMP3O14828 347 aaKnown RBP12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 ATP2C2O75185 946 aa12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 TULP3O75386 442 aa12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 BMP15O95972 392 aa12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 WARSP23381 471 aaKnown RBP12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 LMO2P25791 158 aa12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 LONP1P36776 959 aaKnown RBP12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 WNT7BP56706 349 aa12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 TAF10Q12962 218 aa12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 L1TD1Q5T7N2 865 aaKnown RBP12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 TOGARAM2Q6ZUX3 1019 aa12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 SFR1Q86XK3 245 aa12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 MDM1Q8TC05 714 aa12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 KBTBD7Q8WVZ9 684 aa12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 OVCA2Q8WZ82 227 aa12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 SAAL1Q96ER3 474 aa12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 PCED1BQ96HM7 432 aa12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 ZNF419Q96HQ0 510 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 HPDLQ96IR7 371 aa12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 ANKRD36BP1Q96IX9 119 aa12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 STRA6Q9BX79 667 aa12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 IKZF4Q9H2S9 585 aa12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 MRPL44Q9H9J2 332 aaKnown RBP12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 CYP8B1Q9UNU6 501 aa12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 SH3BP1Q9Y3L3 701 aa12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 NFE2L3Q9Y4A8 694 aa12.2□□□□□ -0.46
TRAPPC9-203ENST00000517667 A0A1W2PQF6 199 aa12.19□□□□□ -0.46
TRAPPC9-203ENST00000517667 GAP43P17677 238 aa12.19□□□□□ -0.46
TRAPPC9-203ENST00000517667 NDUFV2P19404 249 aa12.19□□□□□ -0.46
TRAPPC9-203ENST00000517667 DDIT3P35638 169 aa12.19□□□□□ -0.46
TRAPPC9-203ENST00000517667 GRIK2Q13002 908 aa12.19□□□□□ -0.46
TRAPPC9-203ENST00000517667 ALCAMQ13740 583 aa12.19□□□□□ -0.46
TRAPPC9-203ENST00000517667 CHPFQ8IZ52 775 aa12.19□□□□□ -0.46
TRAPPC9-203ENST00000517667 SYCP3Q8IZU3 236 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms