RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 ITGB1P05556 798 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 FURINP09958 794 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 SRGAP2BP0DMP2 458 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 MED14OSP0DP75 135 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 ACADMP11310 421 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 VDRP11473 427 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 FCER1AP12319 257 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 LAMP2P13473 410 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 TNNT1P13805 278 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 KCNA2P16389 499 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 GNAT2P19087 354 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 HK1P19367 917 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 RXRAP19793 462 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 ITGALP20701 1170 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 GLDCP23378 1020 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 RRM1P23921 792 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 ITGB7P26010 798 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 KLRK1P26718 216 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 ABCD3P28288 659 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 EPHA3P29320 983 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 HTR7P34969 479 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 HOXD13P35453 343 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 RPS19P39019 145 aaKnown RBP1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 GPD2P43304 727 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 LIMS1P48059 325 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 GCLCP48506 637 aaPredicted RBP1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 KCNC1P48547 511 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 POLD2P49005 469 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 CCT4P50991 539 aaKnown RBP1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 ANXA11P50995 505 aaKnown RBP1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 PDE6CP51160 858 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 CCR9P51686 369 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 ZNF134P52741 427 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 RBM5P52756 815 aaKnown RBP eCLIP1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 GP2P55259 537 aaKnown RBP1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 LILRA4P59901 499 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 RNASE9P60153 205 aaKnown RBP1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 RAC3P60763 192 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 SF3A3Q12874 501 aaKnown RBP eCLIP1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 CUL4AQ13619 759 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 ACVR2BQ13705 512 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 CAMK1Q14012 370 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 BOP1Q14137 746 aaKnown RBP1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 DCTN1Q14203 1278 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 E2F2Q14209 437 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 KRT32Q14532 448 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 KCNAB1Q14722 419 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 HLXQ14774 488 aaPredicted RBP1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 GRM4Q14833 912 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 RPS6KA2Q15349 733 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 TSTQ16762 297 aaKnown RBP1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 BTBD16Q32M84 506 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 ZIK1Q3SY52 487 aaPredicted RBP1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 GALNTL6Q49A17 601 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 NOMO2Q5JPE7 1267 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 SPECC1Q5M775 1068 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 ZMYM1Q5SVZ6 1142 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 SLC9C2Q5TAH2 1124 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 CACHD1Q5VU97 1274 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 LIPMQ5VYY2 423 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 ANKS6Q68DC2 871 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 NAIF1Q69YI7 327 aaPredicted RBP1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 TMEM132EQ6IEE7 984 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 EFCAB12Q6NXP0 572 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 TAPT1Q6NXT6 567 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 DENND1BQ6P3S1 775 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 FAM111BQ6SJ93 734 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 LAYNQ6UX15 382 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 CCDC129Q6ZRS4 1044 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 HTR3DQ70Z44 454 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 B4GALNT4Q76KP1 1039 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 KCTD20Q7Z5Y7 419 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 ZSCAN2Q7Z7L9 614 aaPredicted RBP1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 FAM124AQ86V42 546 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 ZNF280BQ86YH2 543 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 RHOT2Q8IXI1 618 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 SP8Q8IXZ3 490 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 SLC15A3Q8IY34 581 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 KBTBD2Q8IY47 623 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 FAM9BQ8IZU0 186 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 CARFQ8N187 725 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 FAM109AQ8N4B1 249 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 NGEFQ8N5V2 710 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 GPATCH11Q8N954 259 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 FSIP1Q8NA03 581 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 FBXO15Q8NCQ5 510 aaPredicted RBP1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 MDGA1Q8NFP4 955 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 NFKBIDQ8NI38 313 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 SUN3Q8TAQ9 357 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 ADAMTS17Q8TE56 1095 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 SLC22A17Q8WUG5 538 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 OVCA2Q8WZ82 227 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 ST8SIA2Q92186 375 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 FAM168AQ92567 244 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 SH3KBP1Q96B97 665 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 C3orf49Q96BT1 292 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 RSPRY1Q96DX4 576 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 RNF125Q96EQ8 232 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 PWWP2AQ96N64 755 aa1.48□□□□□ -2.17
RN7SKP88-201ENST00000516847 TRIB1Q96RU8 372 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms