RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 ZNF689Q96CS4 500 aaPredicted RBP8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 FUBP3Q96I24 572 aaKnown RBP eCLIP8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 CFAP57Q96MR6 1250 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ZNF558Q96NG5 402 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 LRRC1Q9BTT6 524 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 PARD6BQ9BYG5 372 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 RHOBTB2Q9BYZ6 727 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 OSBPL8Q9BZF1 889 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ULBP1Q9BZM6 244 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 DDX47Q9H0S4 455 aaKnown RBP8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 SLITRK6Q9H5Y7 841 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 CWH43Q9H720 699 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ZWILCHQ9H900 591 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 PNPLA8Q9NP80 782 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 KLHL11Q9NVR0 708 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ABI2Q9NYB9 513 aaPredicted RBP8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 PCSK1NQ9UHG2 260 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 USP18Q9UMW8 372 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 PCDHB5Q9Y5E4 795 aa8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ZNF638Q14966 1978 aaKnown RBP8□□□□□ -1.13
SCARNA20.1-201ENST00000516009 GREB1Q4ZG55 1949 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 LRRD1A4D1F6 860 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 HHLA1C9JL84 531 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 PI4K2BG5E9Z4 385 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 FSCN2O14926 492 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 PHF2O75151 1096 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 TRUB2O95900 331 aaKnown RBP7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ZBED1O96006 694 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 FGBP02675 491 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 USP17L7P0C7H9 530 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 RALAP11233 206 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 CPB1P15086 417 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 H2AFXP16104 143 aaPredicted RBP7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 LAG3P18627 525 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 CYP2F1P24903 491 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 CHRNA3P32297 505 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 NOS2P35228 1153 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 GRIK1P39086 918 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 MATKP42679 507 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 NDUFV1P49821 464 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 SULT1E1P49888 294 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 PLXNA3P51805 1871 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 RABGGTBP53611 331 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 YWHAZP63104 245 aaKnown RBP7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 FPGSQ05932 587 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 BRD3Q15059 726 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 LLGL1Q15334 1064 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 USP41Q3LFD5 358 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ATP13A4Q4VNC1 1196 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 DCAF6Q58WW2 860 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 RTP2Q5QGT7 225 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 SH3PXD2AQ5TCZ1 1133 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 TXNRD3NBQ6F5E7 133 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 SCYL2Q6P3W7 929 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 KCNT2Q6UVM3 1135 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 VSTM1Q6UX27 236 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 SPOCD1Q6ZMY3 1216 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 OTOP2Q7RTS6 562 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 GPRIN1Q7Z2K8 1008 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 MAATS1Q7Z4T9 603 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 TMCO2Q7Z6W1 182 aaPredicted RBP7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 TMEM173Q86WV6 379 aaPredicted RBP7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 SCN4BQ8IWT1 228 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 DEFB106AQ8N104 65 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 CCDC26Q8TAB7 109 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 FAM172AQ8WUF8 416 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 BCL7CQ8WUZ0 217 aaPredicted RBP7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 IRGQQ8WZA9 623 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 NDRG1Q92597 394 aaKnown RBP7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 RUBCNQ92622 972 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 MAGOHBQ96A72 148 aaKnown RBP7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ACSF2Q96CM8 615 aaPredicted RBP7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 IGSF21Q96ID5 467 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 B3GALT6Q96L58 329 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 SLITRK1Q96PX8 696 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 PNKPQ96T60 521 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 TBCBQ99426 244 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 TTPALQ9BTX7 342 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 DDX23Q9BUQ8 820 aaKnown RBP7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 TRIM62Q9BVG3 475 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 HEMGNQ9BXL5 484 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 RC3H2Q9HBD1 1191 aaKnown RBP7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 POPDC2Q9HBU9 364 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 TMEM30AQ9NV96 361 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 RAB21Q9UL25 225 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 STAP1Q9ULZ2 295 aa7.99□□□□□ -1.13
SCARNA20.1-201ENST00000516009 TCRBV7S2A1N4TA0A589 114 aa7.98□□□□□ -1.13
SCARNA20.1-201ENST00000516009 CCDC151A5D8V7 595 aa7.98□□□□□ -1.13
SCARNA20.1-201ENST00000516009 YJEFN3A6XGL0 299 aa7.98□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ZBBXA8MT70 800 aa7.98□□□□□ -1.13
SCARNA20.1-201ENST00000516009 E7ENQ6 273 aa7.98□□□□□ -1.13
SCARNA20.1-201ENST00000516009 CAPN9O14815 690 aa7.98□□□□□ -1.13
SCARNA20.1-201ENST00000516009 TRIM66O15016 1216 aa7.98□□□□□ -1.13
SCARNA20.1-201ENST00000516009 RAD51CO43502 376 aa7.98□□□□□ -1.13
SCARNA20.1-201ENST00000516009 TBC1D4O60343 1298 aa7.98□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ERLIN1O75477 346 aa7.98□□□□□ -1.13
SCARNA20.1-201ENST00000516009 HEXIM1O94992 359 aaKnown RBP7.98□□□□□ -1.13
SCARNA20.1-201ENST00000516009 TJP3O95049 919 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms