RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 CAMKK1Q8N5S9 505 aa18.53■□□□□ 0.56
DDX41-217ENST00000515562 SLC2A14Q8TDB8 520 aa18.53■□□□□ 0.56
DDX41-217ENST00000515562 NIF3L1Q9GZT8 377 aa18.53■□□□□ 0.56
DDX41-217ENST00000515562 CYP3A43Q9HB55 503 aa18.53■□□□□ 0.56
DDX41-217ENST00000515562 TMEM8AQ9HCN3 771 aa18.53■□□□□ 0.56
DDX41-217ENST00000515562 CSNK1G1Q9HCP0 422 aa18.53■□□□□ 0.56
DDX41-217ENST00000515562 IL37Q9NZH6 218 aa18.53■□□□□ 0.56
DDX41-217ENST00000515562 CFAP97Q9P2B7 532 aa18.53■□□□□ 0.56
DDX41-217ENST00000515562 USP18Q9UMW8 372 aa18.53■□□□□ 0.56
DDX41-217ENST00000515562 KIAA1549LQ6ZVL6 1849 aa18.53■□□□□ 0.56
DDX41-217ENST00000515562 FAM92AA1XBS5 289 aa18.52■□□□□ 0.56
DDX41-217ENST00000515562 GOLGA6L4A6NEF3 574 aa18.52■□□□□ 0.56
DDX41-217ENST00000515562 PRR5-ARHGAP8B1AHC4 643 aa18.52■□□□□ 0.56
DDX41-217ENST00000515562 CYP17A1P05093 508 aa18.52■□□□□ 0.56
DDX41-217ENST00000515562 FAM200BP0CF97 657 aa18.52■□□□□ 0.56
DDX41-217ENST00000515562 GTF2H1P32780 548 aa18.52■□□□□ 0.56
DDX41-217ENST00000515562 ARHGAP8P85298 464 aa18.52■□□□□ 0.56
DDX41-217ENST00000515562 PPP3CAQ08209 521 aa18.52■□□□□ 0.56
DDX41-217ENST00000515562 ORC1Q13415 861 aa18.52■□□□□ 0.56
DDX41-217ENST00000515562 HECTD3Q5T447 861 aa18.52■□□□□ 0.56
DDX41-217ENST00000515562 CEP68Q76N32 757 aa18.52■□□□□ 0.56
DDX41-217ENST00000515562 RPLP0P6Q8NHW5 317 aa18.52■□□□□ 0.56
DDX41-217ENST00000515562 SCAMP5Q8TAC9 235 aa18.52■□□□□ 0.56
DDX41-217ENST00000515562 TAS1R2Q8TE23 839 aa18.52■□□□□ 0.56
DDX41-217ENST00000515562 FBXO44Q9H4M3 255 aa18.52■□□□□ 0.56
DDX41-217ENST00000515562 FAM49BQ9NUQ9 324 aa18.52■□□□□ 0.56
DDX41-217ENST00000515562 DLL3Q9NYJ7 618 aa18.52■□□□□ 0.56
DDX41-217ENST00000515562 TBC1D14Q9P2M4 693 aa18.52■□□□□ 0.56
DDX41-217ENST00000515562 MYO16Q9Y6X6 1858 aa18.52■□□□□ 0.55
DDX41-217ENST00000515562 E2F8A0AVK6 867 aa18.51■□□□□ 0.55
DDX41-217ENST00000515562 COCHO43405 550 aa18.51■□□□□ 0.55
DDX41-217ENST00000515562 ADH1CP00326 375 aa18.51■□□□□ 0.55
DDX41-217ENST00000515562 NUCB2P80303 420 aa18.51■□□□□ 0.55
DDX41-217ENST00000515562 SRSF5Q13243 272 aaKnown RBP18.51■□□□□ 0.55
DDX41-217ENST00000515562 KRT39Q6A163 491 aa18.51■□□□□ 0.55
DDX41-217ENST00000515562 SYT13Q7L8C5 426 aa18.51■□□□□ 0.55
DDX41-217ENST00000515562 FMR1NBQ8N0W7 255 aaPredicted RBP18.51■□□□□ 0.55
DDX41-217ENST00000515562 ZMIZ2Q8NF64 920 aa18.51■□□□□ 0.55
DDX41-217ENST00000515562 GAB3Q8WWW8 586 aa18.51■□□□□ 0.55
DDX41-217ENST00000515562 OTUB2Q96DC9 234 aa18.51■□□□□ 0.55
DDX41-217ENST00000515562 SMOQ99835 787 aa18.51■□□□□ 0.55
DDX41-217ENST00000515562 NT5C1AQ9BXI3 368 aa18.51■□□□□ 0.55
DDX41-217ENST00000515562 MMRN2Q9H8L6 949 aa18.51■□□□□ 0.55
DDX41-217ENST00000515562 GMIPQ9P107 970 aa18.51■□□□□ 0.55
DDX41-217ENST00000515562 STX10O60499 249 aa18.5■□□□□ 0.55
DDX41-217ENST00000515562 ZDHHC11BP0C7U3 371 aa18.5■□□□□ 0.55
DDX41-217ENST00000515562 EPB41P11171 864 aaKnown RBP18.5■□□□□ 0.55
DDX41-217ENST00000515562 OPRD1P41143 372 aa18.5■□□□□ 0.55
DDX41-217ENST00000515562 MXI1P50539 228 aa18.5■□□□□ 0.55
DDX41-217ENST00000515562 MAP3K7CLP57077 242 aa18.5■□□□□ 0.55
DDX41-217ENST00000515562 MCCD1P59942 119 aaPredicted RBP18.5■□□□□ 0.55
DDX41-217ENST00000515562 PNOCQ13519 176 aa18.5■□□□□ 0.55
DDX41-217ENST00000515562 RSPO4Q2I0M5 234 aaPredicted RBP18.5■□□□□ 0.55
DDX41-217ENST00000515562 DGLUCYQ7Z3D6 616 aa18.5■□□□□ 0.55
DDX41-217ENST00000515562 SMYD4Q8IYR2 804 aaPredicted RBP18.5■□□□□ 0.55
DDX41-217ENST00000515562 ADGRG2Q8IZP9 1017 aa18.5■□□□□ 0.55
DDX41-217ENST00000515562 C12orf29Q8N999 325 aa18.5■□□□□ 0.55
DDX41-217ENST00000515562 EZH1Q92800 747 aaPredicted RBP18.5■□□□□ 0.55
DDX41-217ENST00000515562 FAXDC2Q96IV6 333 aa18.5■□□□□ 0.55
DDX41-217ENST00000515562 GSDMAQ96QA5 445 aa18.5■□□□□ 0.55
DDX41-217ENST00000515562 HNRNPABQ99729 332 aaKnown RBP18.5■□□□□ 0.55
DDX41-217ENST00000515562 DUSP9Q99956 384 aaKnown RBP18.5■□□□□ 0.55
DDX41-217ENST00000515562 GTPBP4Q9BZE4 634 aaKnown RBP18.5■□□□□ 0.55
DDX41-217ENST00000515562 NACA2Q9H009 215 aa18.5■□□□□ 0.55
DDX41-217ENST00000515562 APOBEC3GQ9HC16 384 aaKnown RBP18.5■□□□□ 0.55
DDX41-217ENST00000515562 PNPLA8Q9NP80 782 aa18.5■□□□□ 0.55
DDX41-217ENST00000515562 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.5■□□□□ 0.558e-9■■■■■ 103.2
DDX41-217ENST00000515562 TLR8Q9NR97 1041 aaKnown RBP18.5■□□□□ 0.55
DDX41-217ENST00000515562 CHORDC1Q9UHD1 332 aaPredicted RBP18.5■□□□□ 0.55
DDX41-217ENST00000515562 MYH10P35580 1976 aa18.5■□□□□ 0.55
DDX41-217ENST00000515562 CEP250Q9BV73 2442 aa18.49■□□□□ 0.55
DDX41-217ENST00000515562 CETN3O15182 167 aa18.49■□□□□ 0.55
DDX41-217ENST00000515562 RPP40O75818 363 aaKnown RBP18.49■□□□□ 0.55
DDX41-217ENST00000515562 BEST1O76090 585 aa18.49■□□□□ 0.55
DDX41-217ENST00000515562 TGM1P22735 817 aa18.49■□□□□ 0.55
DDX41-217ENST00000515562 ADORA2BP29275 332 aa18.49■□□□□ 0.55
DDX41-217ENST00000515562 EIF2DP41214 584 aaKnown RBP18.49■□□□□ 0.55
DDX41-217ENST00000515562 SPEM2Q0P670 501 aa18.49■□□□□ 0.55
DDX41-217ENST00000515562 DMC1Q14565 340 aa18.49■□□□□ 0.55
DDX41-217ENST00000515562 DHCR24Q15392 516 aa18.49■□□□□ 0.55
DDX41-217ENST00000515562 GAB4Q2WGN9 574 aa18.49■□□□□ 0.55
DDX41-217ENST00000515562 COBLL1Q53SF7 1204 aa18.49■□□□□ 0.55
DDX41-217ENST00000515562 TTC39CQ8N584 583 aa18.49■□□□□ 0.55
DDX41-217ENST00000515562 FAM160A2Q8N612 972 aaPredicted RBP18.49■□□□□ 0.55
DDX41-217ENST00000515562 ZFRQ96KR1 1074 aaKnown RBP18.49■□□□□ 0.55
DDX41-217ENST00000515562 TWNKQ96RR1 684 aa18.49■□□□□ 0.55
DDX41-217ENST00000515562 TSG101Q99816 390 aa18.49■□□□□ 0.55
DDX41-217ENST00000515562 CCSER2Q9H7U1 834 aa18.49■□□□□ 0.55
DDX41-217ENST00000515562 PARD6AQ9NPB6 346 aa18.49■□□□□ 0.55
DDX41-217ENST00000515562 HOOK1Q9UJC3 728 aaKnown RBP18.49■□□□□ 0.55
DDX41-217ENST00000515562 CDV3Q9UKY7 258 aaKnown RBP18.49■□□□□ 0.55
DDX41-217ENST00000515562 SH3BP1Q9Y3L3 701 aa18.49■□□□□ 0.55
DDX41-217ENST00000515562 CACNA1AO00555 2505 aa18.49■□□□□ 0.55
DDX41-217ENST00000515562 FOXD2O60548 495 aaPredicted RBP18.48■□□□□ 0.55
DDX41-217ENST00000515562 TLR5O60602 858 aa18.48■□□□□ 0.55
DDX41-217ENST00000515562 CILPO75339 1184 aa18.48■□□□□ 0.55
DDX41-217ENST00000515562 SMC2O95347 1197 aa18.48■□□□□ 0.55
DDX41-217ENST00000515562 APBB3O95704 486 aa18.48■□□□□ 0.55
DDX41-217ENST00000515562 CCDC192P0DO97 292 aa18.48■□□□□ 0.55
DDX41-217ENST00000515562 ADH5P11766 374 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms