RNA–Protein interactions for RNA: ENST00000515198.5

PTCD2-210, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-210ENST00000515198 KIF11P52732 1056 aa13.17□□□□□ -0.3
PTCD2-210ENST00000515198 MIIPQ5JXC2 388 aa13.17□□□□□ -0.3
PTCD2-210ENST00000515198 HECTD3Q5T447 861 aa13.17□□□□□ -0.3
PTCD2-210ENST00000515198 CDKAL1Q5VV42 579 aa13.17□□□□□ -0.3
PTCD2-210ENST00000515198 SNX30Q5VWJ9 437 aa13.17□□□□□ -0.3
PTCD2-210ENST00000515198 CWF19L1Q69YN2 538 aaKnown RBP13.17□□□□□ -0.3
PTCD2-210ENST00000515198 TPRG1Q6ZUI0 275 aa13.17□□□□□ -0.3
PTCD2-210ENST00000515198 GPRIN1Q7Z2K8 1008 aa13.17□□□□□ -0.3
PTCD2-210ENST00000515198 TTC30AQ86WT1 665 aa13.17□□□□□ -0.3
PTCD2-210ENST00000515198 DDX42Q86XP3 938 aaKnown RBP eCLIP13.17□□□□□ -0.3
PTCD2-210ENST00000515198 LRRC3BQ96PB8 259 aa13.17□□□□□ -0.3
PTCD2-210ENST00000515198 NACA2Q9H009 215 aa13.17□□□□□ -0.3
PTCD2-210ENST00000515198 FANCLQ9NW38 375 aa13.17□□□□□ -0.3
PTCD2-210ENST00000515198 GMIPQ9P107 970 aa13.17□□□□□ -0.3
PTCD2-210ENST00000515198 ARHGAP26Q9UNA1 814 aa13.17□□□□□ -0.3
PTCD2-210ENST00000515198 SCML2Q9UQR0 700 aa13.17□□□□□ -0.3
PTCD2-210ENST00000515198 KANSL1LA0AUZ9 987 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 RNF225M0QZC1 329 aaPredicted RBP13.16□□□□□ -0.3
PTCD2-210ENST00000515198 MAN2B1O00754 1011 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 XPO1O14980 1071 aaKnown RBP13.16□□□□□ -0.3
PTCD2-210ENST00000515198 OLFM2O95897 454 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 ZDHHC11BP0C7U3 371 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 SETSIPP0DME0 302 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 MBL2P11226 248 aaPredicted RBP13.16□□□□□ -0.3
PTCD2-210ENST00000515198 GLULP15104 373 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 BRD2P25440 801 aaKnown RBP13.16□□□□□ -0.3
PTCD2-210ENST00000515198 PSEN1P49768 467 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 ZNF132P52740 706 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 VCPP55072 806 aaKnown RBP13.16□□□□□ -0.3
PTCD2-210ENST00000515198 MLLT6P55198 1093 aaPredicted RBP13.16□□□□□ -0.3
PTCD2-210ENST00000515198 SLC7A9P82251 487 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 PDE4CQ08493 712 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 USP4Q13107 963 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 MTF1Q14872 753 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 CNGA2Q16280 664 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 SMYD5Q6GMV2 418 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 C1orf228Q6PIY5 440 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 LCLAT1Q6UWP7 414 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 CCDC186Q7Z3E2 898 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 PIGZQ86VD9 579 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 TTC16Q8NEE8 873 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 SH3RF2Q8TEC5 729 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 TFAP2BQ92481 460 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 MSANTD3Q96H12 275 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 ZFYVE19Q96K21 471 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 PRRX2Q99811 253 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 DDX23Q9BUQ8 820 aaKnown RBP13.16□□□□□ -0.3
PTCD2-210ENST00000515198 RNF38Q9H0F5 515 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 KCNH6Q9H252 994 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 C8orf33Q9H7E9 229 aaPredicted RBP13.16□□□□□ -0.3
PTCD2-210ENST00000515198 GKN1Q9NS71 199 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 TAB2Q9NYJ8 693 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.16□□□□□ -0.3
PTCD2-210ENST00000515198 CNTN6Q9UQ52 1028 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 MRPS17Q9Y2R5 130 aaKnown RBP13.16□□□□□ -0.3
PTCD2-210ENST00000515198 SIT1Q9Y3P8 196 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 PIAS3Q9Y6X2 628 aa13.16□□□□□ -0.3
PTCD2-210ENST00000515198 MIA3Q5JRA6 1907 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 M0QYV0 167 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 ARNTLO00327 626 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 CYP26A1O43174 497 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 COCHO43405 550 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 MED7O43513 233 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 CDK11BP21127 795 aaKnown RBP13.15□□□□□ -0.3
PTCD2-210ENST00000515198 USP8P40818 1118 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 PLA2G4AP47712 749 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 TKTL1P51854 596 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 KPNA1P52294 538 aaPredicted RBP13.15□□□□□ -0.3
PTCD2-210ENST00000515198 NUBP1P53384 320 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 UBXN2BQ14CS0 331 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 PDGFRLQ15198 375 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 KRT31Q15323 416 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 ZNF77Q15935 545 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 ARHGAP44Q17R89 818 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 ITPRIPL2Q3MIP1 535 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 ANO6Q4KMQ2 910 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 FKBP15Q5T1M5 1219 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 IER5LQ5T953 404 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 GJB7Q6PEY0 223 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 ZNF852Q6ZMS4 543 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 TMEM105Q8N8V8 129 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 UBA3Q8TBC4 463 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 NELL2Q99435 816 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 FAM83CQ9BQN1 747 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 VPS16Q9H269 839 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 LRRC4Q9HBW1 653 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 DUS2Q9NX74 493 aaKnown RBP13.15□□□□□ -0.3
PTCD2-210ENST00000515198 DNAJC12Q9UKB3 198 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 CPQQ9Y646 472 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 USP3Q9Y6I4 520 aa13.15□□□□□ -0.3
PTCD2-210ENST00000515198 A0A1W2PQH9 124 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 SMTNL1A8MU46 457 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 LEFTY2O00292 366 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 NCAM2O15394 837 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 PI15O43692 258 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 TLR5O60602 858 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 RALAP11233 206 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 ATP5C1P36542 298 aaKnown RBP13.14□□□□□ -0.31
PTCD2-210ENST00000515198 IFNAR2P48551 515 aa13.14□□□□□ -0.31
PTCD2-210ENST00000515198 APBA1Q02410 837 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms