RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 LRRC32Q14392 662 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 FBXW10Q5XX13 1052 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 HLA-DQA1Q5Y7H0 255 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 EFL1Q7Z2Z2 1120 aaKnown RBP7.75□□□□□ -1.17
CCDC30-214ENST00000514642 WDR75Q8IWA0 830 aaKnown RBP7.75□□□□□ -1.17
CCDC30-214ENST00000514642 MYO1HQ8N1T3 1032 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 C18orf25Q96B23 403 aaPredicted RBP7.75□□□□□ -1.17
CCDC30-214ENST00000514642 PRPF18Q99633 342 aaKnown RBP7.75□□□□□ -1.17
CCDC30-214ENST00000514642 CLPBQ9H078 707 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 CLDND1Q9NY35 253 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 KIF17Q9P2E2 1029 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 TBC1D14Q9P2M4 693 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 VPS51Q9UID3 782 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 NDRG2Q9UN36 371 aaKnown RBP7.75□□□□□ -1.17
CCDC30-214ENST00000514642 LSM8O95777 96 aaKnown RBP7.75□□□□□ -1.17
CCDC30-214ENST00000514642 BCL2L1Q07817 233 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 ORC1Q13415 861 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 PKP1Q13835 747 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 ELF2Q15723 593 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 TRIM59Q8IWR1 403 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 CERS5Q8N5B7 392 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 EXD1Q8NHP7 514 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 MAML3Q96JK9 1138 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 ZCCHC17Q9NP64 241 aaKnown RBP7.75□□□□□ -1.17
CCDC30-214ENST00000514642 FZD9O00144 591 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 SMAPO00193 183 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 CSDE1O75534 798 aaKnown RBP7.75□□□□□ -1.17
CCDC30-214ENST00000514642 POLBP06746 335 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 OR1E1P30953 314 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 ABCE1P61221 599 aaKnown RBP7.75□□□□□ -1.17
CCDC30-214ENST00000514642 UBXN2BQ14CS0 331 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 GPR158Q5T848 1215 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 PRR23BQ6ZRT6 265 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 SLC24A5Q71RS6 500 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 FMR1NBQ8N0W7 255 aaPredicted RBP7.75□□□□□ -1.17
CCDC30-214ENST00000514642 OR8D1Q8WZ84 308 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 MAML1Q92585 1016 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 DNAJC1Q96KC8 554 aaKnown RBP7.75□□□□□ -1.17
CCDC30-214ENST00000514642 BTBD7Q9P203 1132 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 KIF13AQ9H1H9 1805 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 FAM205CA6NFA0 338 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 RAMP2O60895 175 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 PYGBP11216 843 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 SNRPD1P62314 119 aaKnown RBP7.75□□□□□ -1.17
CCDC30-214ENST00000514642 EFTUD2Q15029 972 aaKnown RBP eCLIP7.75□□□□□ -1.17
CCDC30-214ENST00000514642 IZUMO3Q5VZ72 239 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 ACAD10Q6JQN1 1059 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 ZBED8Q8IZ13 594 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 PPWD1Q96BP3 646 aaKnown RBP7.75□□□□□ -1.17
CCDC30-214ENST00000514642 TMEM60Q9H2L4 133 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 KRCC1Q9NPI7 259 aaPredicted RBP7.75□□□□□ -1.17
CCDC30-214ENST00000514642 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.75□□□□□ -1.17
CCDC30-214ENST00000514642 GGT7Q9UJ14 662 aa7.75□□□□□ -1.17
CCDC30-214ENST00000514642 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.75□□□□□ -1.17
CCDC30-214ENST00000514642 KNDC1Q76NI1 1749 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 SPATA31C2B4DYI2 1134 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 BAG2O95816 211 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 EIF4BP23588 611 aaKnown RBP7.74□□□□□ -1.17
CCDC30-214ENST00000514642 AARSP49588 968 aaKnown RBP eCLIP7.74□□□□□ -1.17
CCDC30-214ENST00000514642 SERPINB9P50453 376 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 ILF2Q12905 390 aaKnown RBP7.74□□□□□ -1.17
CCDC30-214ENST00000514642 MKRN4PQ13434 485 aaPredicted RBP7.74□□□□□ -1.17
CCDC30-214ENST00000514642 CLYBLQ8N0X4 340 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 MMGT1Q8N4V1 131 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 HJURPQ8NCD3 748 aaPredicted RBP7.74□□□□□ -1.17
CCDC30-214ENST00000514642 ARVCFO00192 962 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 MAFO75444 373 aaPredicted RBP7.74□□□□□ -1.17
CCDC30-214ENST00000514642 SOAT2O75908 522 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 ACSL3O95573 720 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 ACRP10323 421 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 BDNFP23560 247 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 PTGER2P43116 358 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 TROAPQ12815 778 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 GRB10Q13322 594 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 USP10Q14694 798 aaKnown RBP7.74□□□□□ -1.17
CCDC30-214ENST00000514642 MAPRE2Q15555 327 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 DOK6Q6PKX4 331 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 CASP10Q92851 521 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 HPS3Q969F9 1004 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 ZDHHC4Q9NPG8 344 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 XPO7Q9UIA9 1087 aaKnown RBP7.74□□□□□ -1.17
CCDC30-214ENST00000514642 A0A088AWK7 358 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 CLASP2O75122 1294 aaKnown RBP7.74□□□□□ -1.17
CCDC30-214ENST00000514642 VPS26AO75436 327 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 PTPN2P17706 415 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 ZNF10P21506 573 aaPredicted RBP7.74□□□□□ -1.17
CCDC30-214ENST00000514642 ACAT1P24752 427 aaKnown RBP7.74□□□□□ -1.17
CCDC30-214ENST00000514642 SOAT1P35610 550 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 GUCA1AP43080 201 aaPredicted RBP7.74□□□□□ -1.17
CCDC30-214ENST00000514642 PLA2G4AP47712 749 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 USP4Q13107 963 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 ARID5BQ14865 1188 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 TRIM65Q6PJ69 517 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 TSHZ1Q6ZSZ6 1077 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 SYTL1Q8IYJ3 562 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 MAGEC3Q8TD91 643 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 TRIM55Q9BYV6 548 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 GOLPH3Q9H4A6 298 aa7.74□□□□□ -1.17
CCDC30-214ENST00000514642 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.74□□□□□ -1.17
CCDC30-214ENST00000514642 GMEB2Q9UKD1 530 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms