RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 TIGD1Q96MW7 591 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 LINC00597Q9H2U6 94 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 MMRN2Q9H8L6 949 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 SMPD4Q9NXE4 827 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 GMIPQ9P107 970 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 NCDNQ9UBB6 729 aa11.08□□□□□ -0.64
HMGXB3-205ENST00000514469 HHLA1C9JL84 531 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 CETN3O15182 167 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 COCHO43405 550 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 STX10O60499 249 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 ATG13O75143 517 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 SMC2O95347 1197 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 ABL1P00519 1130 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 CYP17A1P05093 508 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 FAM200BP0CF97 657 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 MBL2P11226 248 aaPredicted RBP11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 TRIM21P19474 475 aaKnown RBP11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 ADORA2BP29275 332 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 HOXC13P31276 330 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 CNR2P34972 360 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 OPRD1P41143 372 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 MAP3K7CLP57077 242 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 NR1H3Q13133 447 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 HECTD3Q5T447 861 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 LAIR1Q6GTX8 287 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 GPRIN1Q7Z2K8 1008 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 ELOA2Q8IYF1 753 aaPredicted RBP11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 CCDC150Q8NCX0 1101 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 FBXL13Q8NEE6 735 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 SEMA4DQ92854 862 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 ERCC4Q92889 916 aaPredicted RBP11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 EEF2KMTQ96G04 330 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 FAXDC2Q96IV6 333 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 HNRNPABQ99729 332 aaKnown RBP11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 DUSP9Q99956 384 aaKnown RBP11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 NT5C1AQ9BXI3 368 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 GTPBP4Q9BZE4 634 aaKnown RBP11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 FBXO44Q9H4M3 255 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 CCSER2Q9H7U1 834 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 PNPLA8Q9NP80 782 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 CFAP97Q9P2B7 532 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 PCDHA5Q9Y5H7 936 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 F5P12259 2224 aa11.07□□□□□ -0.64
HMGXB3-205ENST00000514469 OTOGLQ3ZCN5 2332 aa11.06□□□□□ -0.64
HMGXB3-205ENST00000514469 E2F8A0AVK6 867 aa11.06□□□□□ -0.64
HMGXB3-205ENST00000514469 TRIM49BA6NDI0 452 aa11.06□□□□□ -0.64
HMGXB3-205ENST00000514469 SLC9A3R1O14745 358 aaPredicted RBP11.06□□□□□ -0.64
HMGXB3-205ENST00000514469 HRO43593 1189 aa11.06□□□□□ -0.64
HMGXB3-205ENST00000514469 CD58P19256 250 aa11.06□□□□□ -0.64
HMGXB3-205ENST00000514469 ID4P47928 161 aa11.06□□□□□ -0.64
HMGXB3-205ENST00000514469 PGFP49763 221 aa11.06□□□□□ -0.64
HMGXB3-205ENST00000514469 PMS1P54277 932 aaKnown RBP11.06□□□□□ -0.64
HMGXB3-205ENST00000514469 LRRC63Q05C16 580 aa11.06□□□□□ -0.64
HMGXB3-205ENST00000514469 SRSF5Q13243 272 aaKnown RBP11.06□□□□□ -0.64
HMGXB3-205ENST00000514469 CBWD6Q4V339 395 aa11.06□□□□□ -0.64
HMGXB3-205ENST00000514469 CBWD3Q5JTY5 395 aa11.06□□□□□ -0.64
HMGXB3-205ENST00000514469 CBWD5Q5RIA9 395 aa11.06□□□□□ -0.64
HMGXB3-205ENST00000514469 ANKRD40Q6AI12 368 aa11.06□□□□□ -0.64
HMGXB3-205ENST00000514469 SECISBP2LQ93073 1101 aaKnown RBP11.06□□□□□ -0.64
HMGXB3-205ENST00000514469 SMARCE1Q969G3 411 aa11.06□□□□□ -0.64
HMGXB3-205ENST00000514469 TSG101Q99816 390 aa11.06□□□□□ -0.64
HMGXB3-205ENST00000514469 FAM124BQ9H5Z6 455 aaPredicted RBP11.06□□□□□ -0.64
HMGXB3-205ENST00000514469 RAB20Q9NX57 234 aa11.06□□□□□ -0.64
HMGXB3-205ENST00000514469 CHORDC1Q9UHD1 332 aaPredicted RBP11.06□□□□□ -0.64
HMGXB3-205ENST00000514469 HOOK1Q9UJC3 728 aaKnown RBP11.06□□□□□ -0.64
HMGXB3-205ENST00000514469 GMEB2Q9UKD1 530 aa11.06□□□□□ -0.64
HMGXB3-205ENST00000514469 ZNF638Q14966 1978 aaKnown RBP11.06□□□□□ -0.64
HMGXB3-205ENST00000514469 CCDC163A0A0D9SF12 145 aa11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 SCAMP3O14828 347 aaKnown RBP11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 CYP26A1O43174 497 aa11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 TGM1P22735 817 aa11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 EIF2DP41214 584 aaKnown RBP11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 FKBP3Q00688 224 aaKnown RBP11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 SIM2Q14190 667 aaPredicted RBP11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 DHCR24Q15392 516 aa11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 DCAF17Q5H9S7 520 aaPredicted RBP11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 PPP1R26Q5T8A7 1209 aaPredicted RBP11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 HEATR6Q6AI08 1181 aaKnown RBP11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 PRR23BQ6ZRT6 265 aa11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 SYT13Q7L8C5 426 aa11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 ADGRG2Q8IZP9 1017 aa11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 TTC39CQ8N584 583 aa11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 GPR161Q8N6U8 529 aaKnown RBP11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 RPLP0P6Q8NHW5 317 aa11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 SLC35C1Q96A29 364 aa11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 ACDQ96AP0 544 aa11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 RMDN1Q96DB5 314 aa11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 OTUB2Q96DC9 234 aa11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 CYFIP2Q96F07 1278 aa11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 ARID3AQ99856 593 aa11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 CYLDQ9NQC7 956 aa11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 TLR8Q9NR97 1041 aaKnown RBP11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 CISHQ9NSE2 258 aa11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 TBC1D14Q9P2M4 693 aa11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 RAB23Q9ULC3 237 aa11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 SLC8A2Q9UPR5 921 aa11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 SCML2Q9UQR0 700 aa11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 COQ4Q9Y3A0 265 aa11.05□□□□□ -0.64
HMGXB3-205ENST00000514469 MYO16Q9Y6X6 1858 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms