RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 TMEM132BQ14DG7 1078 aa10.05□□□□□ -0.8
VCAN-210ENST00000513960 STXBP2Q15833 593 aa10.05□□□□□ -0.8
VCAN-210ENST00000513960 SUPT20HL1Q3ZLR7 823 aa10.05□□□□□ -0.8
VCAN-210ENST00000513960 KCNT1Q5JUK3 1230 aa10.05□□□□□ -0.8
VCAN-210ENST00000513960 SPATA31D4Q6ZUB0 917 aa10.05□□□□□ -0.8
VCAN-210ENST00000513960 RFX6Q8HWS3 928 aa10.05□□□□□ -0.8
VCAN-210ENST00000513960 TMPRSS6Q8IU80 811 aa10.05□□□□□ -0.8
VCAN-210ENST00000513960 GALNT4Q8N4A0 578 aa10.05□□□□□ -0.8
VCAN-210ENST00000513960 GDPD5Q8WTR4 605 aa10.05□□□□□ -0.8
VCAN-210ENST00000513960 CLMNQ96JQ2 1002 aa10.05□□□□□ -0.8
VCAN-210ENST00000513960 PPP1R36Q96LQ0 422 aa10.05□□□□□ -0.8
VCAN-210ENST00000513960 CALN1Q9BXU9 219 aa10.05□□□□□ -0.8
VCAN-210ENST00000513960 IMPG2Q9BZV3 1241 aa10.05□□□□□ -0.8
VCAN-210ENST00000513960 RBAKQ9NYW8 714 aaPredicted RBP10.05□□□□□ -0.8
VCAN-210ENST00000513960 PCSK1NQ9UHG2 260 aa10.05□□□□□ -0.8
VCAN-210ENST00000513960 ZNF214Q9UL59 606 aaPredicted RBP10.05□□□□□ -0.8
VCAN-210ENST00000513960 SUPT3HO75486 399 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 ZMPSTE24O75844 475 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 MAP3K6O95382 1288 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 LDHAP00338 332 aaKnown RBP10.04□□□□□ -0.8
VCAN-210ENST00000513960 GLRA2P23416 452 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 BAG6P46379 1132 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 GALK1P51570 392 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 ACAP1Q15027 740 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 BSPRYQ5W0U4 402 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 ABHD15Q6UXT9 468 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 OR6Y1Q8NGX8 325 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 MSTO1Q9BUK6 570 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 AVENQ9NQS1 362 aaPredicted RBP10.04□□□□□ -0.8
VCAN-210ENST00000513960 HOXC10Q9NYD6 342 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 XPO7Q9UIA9 1087 aaKnown RBP10.04□□□□□ -0.8
VCAN-210ENST00000513960 RGS20O76081 388 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 PROSCO94903 275 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 NLRP11P59045 1033 aaKnown RBP10.04□□□□□ -0.8
VCAN-210ENST00000513960 TGFB2P61812 414 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 ZNF200P98182 395 aaPredicted RBP10.04□□□□□ -0.8
VCAN-210ENST00000513960 ENPEPQ07075 957 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 ZACNQ401N2 412 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 FAXCQ5TGI0 409 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 RBM44Q6ZP01 1051 aaKnown RBP10.04□□□□□ -0.8
VCAN-210ENST00000513960 NAT14Q8WUY8 206 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 MCEEQ96PE7 176 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 TCHPQ9BT92 498 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 WWP1Q9H0M0 922 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 MRPL47Q9HD33 250 aaKnown RBP10.04□□□□□ -0.8
VCAN-210ENST00000513960 FZD1Q9UP38 647 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 PRR5-ARHGAP8B1AHC4 643 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 ADCY3O60266 1144 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 GRIN3BO60391 1043 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 ARHGAP8P85298 464 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 PEX6Q13608 980 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 NCOA4Q13772 614 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 TRMT5Q32P41 509 aaKnown RBP10.04□□□□□ -0.8
VCAN-210ENST00000513960 DNAJC24Q6P3W2 148 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 MYLK4Q86YV6 388 aaPredicted RBP10.04□□□□□ -0.8
VCAN-210ENST00000513960 DENND1AQ8TEH3 1009 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 ZNF516Q92618 1163 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 PDLIM7Q9NR12 457 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 TELO2Q9Y4R8 837 aa10.04□□□□□ -0.8
VCAN-210ENST00000513960 A8MXQ7 604 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 SPATA31C2B4DYI2 1134 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 FAM155BO75949 473 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 STBD1O95210 358 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 UNGP13051 313 aaPredicted RBP10.03□□□□□ -0.8
VCAN-210ENST00000513960 CD19P15391 556 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 PEX2P28328 305 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 GNA15P30679 374 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 AQP4P55087 323 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 MCCD1P59942 119 aaPredicted RBP10.03□□□□□ -0.8
VCAN-210ENST00000513960 GSTA3Q16772 222 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 CASC4Q6P4E1 433 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 TRIM72Q6ZMU5 477 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 E2F7Q96AV8 911 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 NR1H4Q96RI1 486 aaPredicted RBP10.03□□□□□ -0.8
VCAN-210ENST00000513960 COMMD3-BMI1R4GMX3 469 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 TP73O15350 636 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 OATP04181 439 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 CYP1A1P04798 512 aaPredicted RBP10.03□□□□□ -0.8
VCAN-210ENST00000513960 TCF4P15884 667 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 NRLP54845 237 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 CUL2Q13617 745 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 DNAL1Q4LDG9 190 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 ZC3H12AQ5D1E8 599 aaKnown RBP10.03□□□□□ -0.8
VCAN-210ENST00000513960 ANKRD22Q5VYY1 191 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 TDRD10Q5VZ19 366 aaKnown RBP10.03□□□□□ -0.8
VCAN-210ENST00000513960 TAS1R3Q7RTX0 852 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 FAM71DQ8N9W8 422 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 GATA6Q92908 595 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 PANX3Q96QZ0 392 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 TARS2Q9BW92 718 aaKnown RBP10.03□□□□□ -0.8
VCAN-210ENST00000513960 SLC7A8Q9UHI5 535 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 TAGLN3Q9UI15 199 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 SLC24A2Q9UI40 661 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 MROH7Q68CQ1 1323 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 KAT6AQ92794 2004 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 H7C0C1 242 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 WEE2P0C1S8 567 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 C6orf222P0C671 652 aaPredicted RBP10.03□□□□□ -0.8
VCAN-210ENST00000513960 NAMPTP43490 491 aa10.03□□□□□ -0.8
VCAN-210ENST00000513960 ATP5OP48047 213 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms