RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 RDH13Q8NBN7 331 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 GOLGA5Q8TBA6 731 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 MRPS31Q92665 395 aaKnown RBP10.49□□□□□ -0.73
CCL28-203ENST00000513525 SYT15Q9BQS2 421 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 LMAN1LQ9HAT1 526 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 SLC39A2Q9NP94 309 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 ZSCAN32Q9NX65 697 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 CEP250Q9BV73 2442 aa10.49□□□□□ -0.73
CCL28-203ENST00000513525 KCNJ18B7U540 433 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 HCRTO43612 131 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 CST3P01034 146 aaPredicted RBP10.48□□□□□ -0.73
CCL28-203ENST00000513525 TUBB4AP04350 444 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 DLATP10515 647 aaKnown RBP10.48□□□□□ -0.73
CCL28-203ENST00000513525 TDGF1P13385 188 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 LMO2P25791 158 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 AVPR1AP37288 418 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 CCR3P51677 355 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 KPNA1P52294 538 aaPredicted RBP10.48□□□□□ -0.73
CCL28-203ENST00000513525 TRIM14Q14142 442 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 LRRC32Q14392 662 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 KCNJ12Q14500 433 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 PPP2R5DQ14738 602 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 KRT31Q15323 416 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 DDR2Q16832 855 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 CCDC142Q17RM4 750 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 VSTM1Q6UX27 236 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 MON1AQ86VX9 555 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 GPIHBP1Q8IV16 184 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 CCAR2Q8N163 923 aaKnown RBP10.48□□□□□ -0.73
CCL28-203ENST00000513525 GUF1Q8N442 669 aaKnown RBP10.48□□□□□ -0.73
CCL28-203ENST00000513525 MAB21L3Q8N8X9 362 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 KIAA0895Q8NCT3 520 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 STKLD1Q8NE28 680 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 USP13Q92995 863 aaPredicted RBP10.48□□□□□ -0.73
CCL28-203ENST00000513525 ZFYVE19Q96K21 471 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 SPATA17Q96L03 361 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 CRTAC1Q9NQ79 661 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 TDP1Q9NUW8 608 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 THG1LQ9NWX6 298 aaKnown RBP10.48□□□□□ -0.73
CCL28-203ENST00000513525 GTSE1Q9NYZ3 720 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 MAGEC2Q9UBF1 373 aaPredicted RBP10.48□□□□□ -0.73
CCL28-203ENST00000513525 MAGED2Q9UNF1 606 aaPredicted RBP10.48□□□□□ -0.73
CCL28-203ENST00000513525 GPR179Q6PRD1 2367 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 ARHGAP6O43182 974 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 ATP2C2O75185 946 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 PAPSS2O95340 614 aaPredicted RBP10.48□□□□□ -0.73
CCL28-203ENST00000513525 FGFR1OPO95684 399 aaKnown RBP10.48□□□□□ -0.73
CCL28-203ENST00000513525 ATICP31939 592 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 SOX9P48436 509 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 COPB1P53618 953 aaKnown RBP10.48□□□□□ -0.73
CCL28-203ENST00000513525 NRLP54845 237 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 CLDN10P78369 228 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 STK4Q13043 487 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 ITPRIPL2Q3MIP1 535 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 HSP90AA4PQ58FG1 418 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 WDR44Q5JSH3 913 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 DGKKQ5KSL6 1271 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 SDHAF4Q5VUM1 108 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 TXNDC8Q6A555 127 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 TXNDC11Q6PKC3 985 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 SLC9A9Q8IVB4 645 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 MYCBPAPQ8TBZ2 947 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 ATRIPQ8WXE1 791 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 RUBCNQ92622 972 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 MYLPFQ96A32 169 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 CCDC127Q96BQ5 260 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 PANX2Q96RD6 677 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 MMS19Q96T76 1030 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 FAM83CQ9BQN1 747 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 EPC1Q9H2F5 836 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 VRTNQ9H8Y1 702 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 DMAC2Q9NW81 257 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 CCL26Q9Y258 94 aa10.48□□□□□ -0.73
CCL28-203ENST00000513525 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.48□□□□□ -0.73
CCL28-203ENST00000513525 MYO18AQ92614 2054 aaKnown RBP10.47□□□□□ -0.73
CCL28-203ENST00000513525 CACNA1AO00555 2505 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 AKR1B15C9JRZ8 316 aaPredicted RBP10.47□□□□□ -0.73
CCL28-203ENST00000513525 C3orf80F5H4A9 247 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 PDXKO00764 312 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 STX10O60499 249 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 EXOC3O60645 756 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 TPM1P09493 284 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 TCF3P15923 654 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 AP3M2P53677 418 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 PSMC1P62191 440 aaKnown RBP10.47□□□□□ -0.73
CCL28-203ENST00000513525 LRRC63Q05C16 580 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 TNK2Q07912 1038 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 CCINQ13939 588 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 GAS6Q14393 721 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 WDR72Q3MJ13 1102 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 TSSK4Q6SA08 328 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 IRF2BP1Q8IU81 584 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 SCN4BQ8IWT1 228 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 SYNPOQ8N3V7 929 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 SPEM1Q8N4L4 309 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 PARD3BQ8TEW8 1205 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 PCED1BQ96HM7 432 aa10.47□□□□□ -0.73
CCL28-203ENST00000513525 DUSP9Q99956 384 aaKnown RBP10.47□□□□□ -0.73
CCL28-203ENST00000513525 MRPL45Q9BRJ2 306 aaKnown RBP10.47□□□□□ -0.73
CCL28-203ENST00000513525 TTLL2Q9BWV7 592 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms