RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 SH3BP5O60239 455 aa14.86□□□□□ -0.03
SPCS3-204ENST00000513139 TBCAO75347 108 aaKnown RBP14.86□□□□□ -0.03
SPCS3-204ENST00000513139 ZNF217O75362 1048 aa14.86□□□□□ -0.03
SPCS3-204ENST00000513139 FTH1P19P0C7X4 201 aa14.86□□□□□ -0.03
SPCS3-204ENST00000513139 ADH5P11766 374 aa14.86□□□□□ -0.03
SPCS3-204ENST00000513139 GABRG2P18507 467 aa14.86□□□□□ -0.03
SPCS3-204ENST00000513139 ADSSP30520 456 aa14.86□□□□□ -0.03
SPCS3-204ENST00000513139 NOP14P78316 857 aaKnown RBP14.86□□□□□ -0.03
SPCS3-204ENST00000513139 TFAMQ00059 246 aaKnown RBP14.86□□□□□ -0.03
SPCS3-204ENST00000513139 MAPRE1Q15691 268 aaKnown RBP14.86□□□□□ -0.03
SPCS3-204ENST00000513139 CCDC142Q17RM4 750 aa14.86□□□□□ -0.03
SPCS3-204ENST00000513139 NUDT18Q6ZVK8 323 aa14.86□□□□□ -0.03
SPCS3-204ENST00000513139 GLRX5Q86SX6 157 aa14.86□□□□□ -0.03
SPCS3-204ENST00000513139 OSTM1Q86WC4 334 aa14.86□□□□□ -0.03
SPCS3-204ENST00000513139 C12orf40Q86WS4 652 aa14.86□□□□□ -0.03
SPCS3-204ENST00000513139 ADGRF2Q8IZF7 708 aa14.86□□□□□ -0.03
SPCS3-204ENST00000513139 PHTF2Q8N3S3 785 aa14.86□□□□□ -0.03
SPCS3-204ENST00000513139 HVCN1Q96D96 273 aa14.86□□□□□ -0.03
SPCS3-204ENST00000513139 OTUB2Q96DC9 234 aa14.86□□□□□ -0.03
SPCS3-204ENST00000513139 CALML4Q96GE6 196 aa14.86□□□□□ -0.03
SPCS3-204ENST00000513139 RNF38Q9H0F5 515 aa14.86□□□□□ -0.03
SPCS3-204ENST00000513139 FAM124BQ9H5Z6 455 aaPredicted RBP14.86□□□□□ -0.03
SPCS3-204ENST00000513139 DKK4Q9UBT3 224 aa14.86□□□□□ -0.03
SPCS3-204ENST00000513139 APOBEC2Q9Y235 224 aaKnown RBP14.86□□□□□ -0.03
SPCS3-204ENST00000513139 SNX9Q9Y5X1 595 aa14.86□□□□□ -0.03
SPCS3-204ENST00000513139 K7ELQ4 463 aaPredicted RBP14.85□□□□□ -0.03
SPCS3-204ENST00000513139 OAS1P00973 400 aaKnown RBP14.85□□□□□ -0.03
SPCS3-204ENST00000513139 KRT18P05783 430 aaKnown RBP14.85□□□□□ -0.03
SPCS3-204ENST00000513139 USP46P62068 366 aa14.85□□□□□ -0.03
SPCS3-204ENST00000513139 CUL4AQ13619 759 aa14.85□□□□□ -0.03
SPCS3-204ENST00000513139 DHX8Q14562 1220 aaKnown RBP14.85□□□□□ -0.03
SPCS3-204ENST00000513139 SOWAHAQ2M3V2 549 aa14.85□□□□□ -0.03
SPCS3-204ENST00000513139 LIMS2Q7Z4I7 341 aa14.85□□□□□ -0.03
SPCS3-204ENST00000513139 SLC41A1Q8IVJ1 513 aa14.85□□□□□ -0.03
SPCS3-204ENST00000513139 NAXDQ8IW45 347 aa14.85□□□□□ -0.03
SPCS3-204ENST00000513139 CSGALNACT2Q8N6G5 542 aa14.85□□□□□ -0.03
SPCS3-204ENST00000513139 ZNF513Q8N8E2 541 aaPredicted RBP14.85□□□□□ -0.03
SPCS3-204ENST00000513139 OR2I1PQ8NGU4 316 aa14.85□□□□□ -0.03
SPCS3-204ENST00000513139 CAMK1GQ96NX5 476 aa14.85□□□□□ -0.03
SPCS3-204ENST00000513139 ZHX3Q9H4I2 956 aa14.85□□□□□ -0.03
SPCS3-204ENST00000513139 BLOC1S4Q9NUP1 217 aa14.85□□□□□ -0.03
SPCS3-204ENST00000513139 CALCOCO1Q9P1Z2 691 aa14.85□□□□□ -0.03
SPCS3-204ENST00000513139 KIAA1522Q9P206 1035 aaPredicted RBP14.85□□□□□ -0.03
SPCS3-204ENST00000513139 SUSD2Q9UGT4 822 aa14.85□□□□□ -0.03
SPCS3-204ENST00000513139 CDH9Q9ULB4 789 aa14.85□□□□□ -0.03
SPCS3-204ENST00000513139 CPQQ9Y646 472 aa14.85□□□□□ -0.03
SPCS3-204ENST00000513139 IGHV1OR15-9A0A0B4J2B8 117 aa14.84□□□□□ -0.03
SPCS3-204ENST00000513139 E2F8A0AVK6 867 aa14.84□□□□□ -0.03
SPCS3-204ENST00000513139 TBC1D3BA6NDS4 549 aa14.84□□□□□ -0.03
SPCS3-204ENST00000513139 TRIM66O15016 1216 aa14.84□□□□□ -0.03
SPCS3-204ENST00000513139 ZBTB24O43167 697 aaPredicted RBP14.84□□□□□ -0.03
SPCS3-204ENST00000513139 LDHAP00338 332 aaKnown RBP14.84□□□□□ -0.03
SPCS3-204ENST00000513139 PLCG1P19174 1290 aa14.84□□□□□ -0.03
SPCS3-204ENST00000513139 BDNFP23560 247 aa14.84□□□□□ -0.03
SPCS3-204ENST00000513139 ANXA13P27216 316 aa14.84□□□□□ -0.03
SPCS3-204ENST00000513139 GRIK1P39086 918 aa14.84□□□□□ -0.03
SPCS3-204ENST00000513139 UBA7P41226 1012 aa14.84□□□□□ -0.03
SPCS3-204ENST00000513139 RBP5P82980 135 aa14.84□□□□□ -0.03
SPCS3-204ENST00000513139 GAD2Q05329 585 aa14.84□□□□□ -0.03
SPCS3-204ENST00000513139 KDSRQ06136 332 aa14.84□□□□□ -0.03
SPCS3-204ENST00000513139 ZNF720Q7Z2F6 126 aa14.84□□□□□ -0.03
SPCS3-204ENST00000513139 HSCBQ8IWL3 235 aa14.84□□□□□ -0.03
SPCS3-204ENST00000513139 BRSK2Q8IWQ3 736 aa14.84□□□□□ -0.03
SPCS3-204ENST00000513139 ETFBKMTQ8IXQ9 262 aa14.84□□□□□ -0.03
SPCS3-204ENST00000513139 DEFB119Q8N690 84 aa14.84□□□□□ -0.03
SPCS3-204ENST00000513139 ZNF419Q96HQ0 510 aaPredicted RBP14.84□□□□□ -0.03
SPCS3-204ENST00000513139 DUSP9Q99956 384 aaKnown RBP14.84□□□□□ -0.03
SPCS3-204ENST00000513139 SYT15Q9BQS2 421 aa14.84□□□□□ -0.03
SPCS3-204ENST00000513139 ZDHHC5Q9C0B5 715 aa14.84□□□□□ -0.03
SPCS3-204ENST00000513139 ZDHHC4Q9NPG8 344 aa14.84□□□□□ -0.03
SPCS3-204ENST00000513139 CFAP97Q9P2B7 532 aa14.84□□□□□ -0.03
SPCS3-204ENST00000513139 STARD13Q9Y3M8 1113 aa14.84□□□□□ -0.03
SPCS3-204ENST00000513139 EIF4E1BA6NMX2 242 aaKnown RBP14.83□□□□□ -0.04
SPCS3-204ENST00000513139 HOXC11O43248 304 aaPredicted RBP14.83□□□□□ -0.04
SPCS3-204ENST00000513139 HCRTO43612 131 aa14.83□□□□□ -0.04
SPCS3-204ENST00000513139 ATP2C2O75185 946 aa14.83□□□□□ -0.04
SPCS3-204ENST00000513139 C7P10643 843 aa14.83□□□□□ -0.04
SPCS3-204ENST00000513139 HOXB2P14652 356 aa14.83□□□□□ -0.04
SPCS3-204ENST00000513139 GNSP15586 552 aa14.83□□□□□ -0.04
SPCS3-204ENST00000513139 NTSR1P30989 418 aa14.83□□□□□ -0.04
SPCS3-204ENST00000513139 WNT7BP56706 349 aa14.83□□□□□ -0.04
SPCS3-204ENST00000513139 MYO1EQ12965 1108 aa14.83□□□□□ -0.04
SPCS3-204ENST00000513139 MCM6Q14566 821 aa14.83□□□□□ -0.04
SPCS3-204ENST00000513139 PLEKHG6Q3KR16 790 aa14.83□□□□□ -0.04
SPCS3-204ENST00000513139 LY6G5CQ5SRR4 150 aa14.83□□□□□ -0.04
SPCS3-204ENST00000513139 SYCP2LQ5T4T6 812 aa14.83□□□□□ -0.04
SPCS3-204ENST00000513139 BTBD8Q5XKL5 378 aa14.83□□□□□ -0.04
SPCS3-204ENST00000513139 TOGARAM2Q6ZUX3 1019 aa14.83□□□□□ -0.04
SPCS3-204ENST00000513139 PNPLA1Q8N8W4 532 aa14.83□□□□□ -0.04
SPCS3-204ENST00000513139 TRIML1Q8N9V2 468 aa14.83□□□□□ -0.04
SPCS3-204ENST00000513139 GLIS3Q8NEA6 775 aa14.83□□□□□ -0.04
SPCS3-204ENST00000513139 RAD54LQ92698 747 aa14.83□□□□□ -0.04
SPCS3-204ENST00000513139 FOXJ1Q92949 421 aa14.83□□□□□ -0.04
SPCS3-204ENST00000513139 MYLPFQ96A32 169 aa14.83□□□□□ -0.04
SPCS3-204ENST00000513139 C8orf48Q96LL4 319 aa14.83□□□□□ -0.04
SPCS3-204ENST00000513139 HSPA12BQ96MM6 686 aa14.83□□□□□ -0.04
SPCS3-204ENST00000513139 BBC3Q96PG8 261 aaPredicted RBP14.83□□□□□ -0.04
SPCS3-204ENST00000513139 SLITRK1Q96PX8 696 aa14.83□□□□□ -0.04
SPCS3-204ENST00000513139 FAM213AQ9BRX8 229 aa14.83□□□□□ -0.04
SPCS3-204ENST00000513139 STRA6Q9BX79 667 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms