RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 ECT2Q9H8V3 914 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 METTL14Q9HCE5 456 aaKnown RBP6.88□□□□□ -1.31
KDM3B-208ENST00000512928 HPS4Q9NQG7 708 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 CISHQ9NSE2 258 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 GMIPQ9P107 970 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 GCNT4Q9P109 453 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 ARHGAP26Q9UNA1 814 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 SPTBN4Q9H254 2564 aa6.88□□□□□ -1.31
KDM3B-208ENST00000512928 VPS13AQ96RL7 3174 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 OTOL1A6NHN0 477 aaPredicted RBP6.87□□□□□ -1.31
KDM3B-208ENST00000512928 SHISA7A6NL88 538 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 PPP1R3GB7ZBB8 358 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 PROB1E7EW31 1015 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 COCHO43405 550 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 TLR5O60602 858 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 NFATC1O95644 943 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 OAS1P00973 400 aaKnown RBP6.87□□□□□ -1.31
KDM3B-208ENST00000512928 CHRNB1P11230 501 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 PFKLP17858 780 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 GJA4P35212 333 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 CXCL12P48061 93 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 FMO5P49326 533 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 CCR3P51677 355 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 MLLT6P55198 1093 aaPredicted RBP6.87□□□□□ -1.31
KDM3B-208ENST00000512928 YWHAEP62258 255 aaKnown RBP6.87□□□□□ -1.31
KDM3B-208ENST00000512928 SATB1Q01826 763 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 FZD5Q13467 585 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 TPD52L1Q16890 204 aaPredicted RBP6.87□□□□□ -1.31
KDM3B-208ENST00000512928 GOLGA7BQ2TAP0 167 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 DGKKQ5KSL6 1271 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 PPP1R26Q5T8A7 1209 aaPredicted RBP6.87□□□□□ -1.31
KDM3B-208ENST00000512928 NAIF1Q69YI7 327 aaPredicted RBP6.87□□□□□ -1.31
KDM3B-208ENST00000512928 HEATR6Q6AI08 1181 aaKnown RBP6.87□□□□□ -1.31
KDM3B-208ENST00000512928 TTI2Q6NXR4 508 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 CLEC20AQ6ZU45 233 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 GPRIN1Q7Z2K8 1008 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 ZC3H3Q8IXZ2 948 aaKnown RBP6.87□□□□□ -1.31
KDM3B-208ENST00000512928 MAML2Q8IZL2 1156 aaPredicted RBP6.87□□□□□ -1.31
KDM3B-208ENST00000512928 PPM1KQ8N3J5 372 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 TTC39CQ8N584 583 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 WHAMMQ8TF30 809 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 OVCA2Q8WZ82 227 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 SLC35C1Q96A29 364 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 RMDN1Q96DB5 314 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 TMEM176AQ96HP8 235 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 NT5C1BQ96P26 610 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 HNRNPABQ99729 332 aaKnown RBP6.87□□□□□ -1.31
KDM3B-208ENST00000512928 P2RY13Q9BPV8 354 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 SRRTQ9BXP5 876 aaKnown RBP6.87□□□□□ -1.31
KDM3B-208ENST00000512928 CHRDQ9H2X0 955 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 FBXO44Q9H4M3 255 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 TLR8Q9NR97 1041 aaKnown RBP6.87□□□□□ -1.31
KDM3B-208ENST00000512928 FBXO4Q9UKT5 387 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 SH3BP1Q9Y3L3 701 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 FANCMQ8IYD8 2048 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 PTPRDP23468 1912 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 PATJQ8NI35 1801 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 FAM186AA6NE01 2351 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 PTPRZ1P23471 2315 aaPredicted RBP6.87□□□□□ -1.31
KDM3B-208ENST00000512928 WDR87Q6ZQQ6 2873 aa6.87□□□□□ -1.31
KDM3B-208ENST00000512928 A0A1W2PQH9 124 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 SLC9A3R1O14745 358 aaPredicted RBP6.86□□□□□ -1.31
KDM3B-208ENST00000512928 TNFRSF10BO14763 440 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 RNF40O75150 1001 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 GABBR2O75899 941 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 KRT37O76014 449 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 FGFR1OPO95684 399 aaKnown RBP6.86□□□□□ -1.31
KDM3B-208ENST00000512928 GNA14O95837 355 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 TBX18O95935 607 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 MBD3O95983 291 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 EGFP01133 1207 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 LMNAP02545 664 aaKnown RBP6.86□□□□□ -1.31
KDM3B-208ENST00000512928 AFPP02771 609 aaKnown RBP6.86□□□□□ -1.31
KDM3B-208ENST00000512928 CCDC192P0DO97 292 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 TBXAS1P24557 533 aaPredicted RBP6.86□□□□□ -1.31
KDM3B-208ENST00000512928 GALK1P51570 392 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 RAD23BP54727 409 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 SEC13P55735 322 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 SLC7A9P82251 487 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 ZXDBP98169 803 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 GOLGA8FQ08AF8 430 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 GOLGA8DPQ0D2H9 430 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 LPAL2Q16609 132 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 KLHL40Q2TBA0 621 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 EML3Q32P44 896 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 SGO2Q562F6 1265 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 C10orf120Q5SQS8 335 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 FSTL4Q6MZW2 842 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 TMEM270Q6UE05 265 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 PRR23BQ6ZRT6 265 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 RRAGAQ7L523 313 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 DDX42Q86XP3 938 aaKnown RBP eCLIP6.86□□□□□ -1.31
KDM3B-208ENST00000512928 MIB1Q86YT6 1006 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 KIAA2013Q8IYS2 634 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 ZNF687Q8N1G0 1237 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 SPEM1Q8N4L4 309 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 TRIML1Q8N9V2 468 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 SLC4A11Q8NBS3 891 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 ZMIZ2Q8NF64 920 aa6.86□□□□□ -1.31
KDM3B-208ENST00000512928 CD101Q93033 1021 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms