RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 LRIT1Q9P2V4 623 aa4.62□□□□□ -1.67
CALCOCO2-220ENST00000511816 NKX1-2Q9UD57 310 aaPredicted RBP4.62□□□□□ -1.67
CALCOCO2-220ENST00000511816 ZMYND8Q9ULU4 1186 aaPredicted RBP4.62□□□□□ -1.67
CALCOCO2-220ENST00000511816 SH2B3Q9UQQ2 575 aa4.62□□□□□ -1.67
CALCOCO2-220ENST00000511816 TBC1D30Q9Y2I9 924 aa4.62□□□□□ -1.67
CALCOCO2-220ENST00000511816 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.62□□□□□ -1.67
CALCOCO2-220ENST00000511816 FER1L4A9Z1Z3 1794 aa4.62□□□□□ -1.67
CALCOCO2-220ENST00000511816 TMEM191CA6NGB0 347 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 PPM1DO15297 605 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 LPXNO60711 386 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 VIPP01282 170 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 PRKCBP05771 671 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 CSF1RP07333 972 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 PAX3P23760 479 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 GABRB3P28472 473 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 UQCRC1P31930 480 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 GRK6P43250 576 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 SUMO2P61956 95 aaKnown RBP4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 DGCR2P98153 550 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 GPS1Q13098 491 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 MANEALQ5VSG8 457 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 KAZNQ674X7 775 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 GGT6Q6P531 493 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 RINLQ6ZS11 566 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 KIAA0408Q6ZU52 694 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 RHOUQ7L0Q8 258 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 KCTD20Q7Z5Y7 419 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 CCDC28AQ8IWP9 274 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 FAM9BQ8IZU0 186 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 SLC16A11Q8NCK7 471 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 NEU4Q8WWR8 484 aaPredicted RBP4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 ATG4AQ8WYN0 398 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 RSPRY1Q96DX4 576 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 PBKQ96KB5 322 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 Q96MF0 132 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 PRPF18Q99633 342 aaKnown RBP4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 PTPRHQ9HD43 1115 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 DACT1Q9NYF0 836 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 STEAP1Q9UHE8 339 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 CCNL1Q9UK58 526 aaPredicted RBP4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 SSX2IPQ9Y2D8 614 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 HS3ST4Q9Y661 456 aa4.61□□□□□ -1.67
CALCOCO2-220ENST00000511816 M0R3H8 397 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 ZSCAN9O15535 394 aaPredicted RBP4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 SRGAP2BP0DMP2 458 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 ADORA2AP29274 412 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 CHKAP35790 457 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 LIPAP38571 399 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 HALP42357 657 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 CCT5P48643 541 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 ATXN1P54253 815 aaKnown RBP4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 MPP3Q13368 585 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 PTK2BQ14289 1009 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 SPARCL1Q14515 664 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 KCNAB1Q14722 419 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 CLCA4Q14CN2 919 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 TBCCQ15814 346 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 ST3GAL2Q16842 350 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 PFKFB4Q16877 469 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 PTCHD3Q3KNS1 767 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 TBC1D25Q3MII6 688 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 CCDC174Q6PII3 467 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 RASGRP3Q8IV61 690 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 CNPY4Q8N129 248 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 FSTL5Q8N475 847 aaPredicted RBP4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 MBD3L2Q8NHZ7 208 aaPredicted RBP4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 MYCBPAPQ8TBZ2 947 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 FAM71BQ8TC56 605 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 TMEM171Q8WVE6 324 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 WDR60Q8WVS4 1066 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 ASB10Q8WXI3 467 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 LPIN2Q92539 896 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 VPS50Q96JG6 964 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 RMDN3Q96TC7 470 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 GDF15Q99988 308 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 C17orf80Q9BSJ5 609 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 VN1R3Q9BXE9 311 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 MYLK2Q9H1R3 596 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 MMRN2Q9H8L6 949 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 AGO4Q9HCK5 861 aaKnown RBP4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 LRFN1Q9P244 771 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 PNMA2Q9UL42 364 aa4.6□□□□□ -1.67
CALCOCO2-220ENST00000511816 A1L4Q6 167 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 SYT5O00445 386 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 PIP5K1BO14986 540 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 NBNO60934 754 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 CHRM2P08172 466 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 ITGA2BP08514 1039 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 ZFXP17010 805 aaPredicted RBP4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 NDUFB7P17568 137 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 TYRP1P17643 537 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 ZFP36P26651 326 aaKnown RBP4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 RBL1P28749 1068 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 PDE1AP54750 535 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 ALDH18A1P54886 795 aaKnown RBP4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 TPTEP56180 551 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 TIRAPP58753 221 aa4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 TIAL1Q01085 375 aaKnown RBP eCLIP4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 FOXD4Q12950 439 aaPredicted RBP4.59□□□□□ -1.67
CALCOCO2-220ENST00000511816 EIF2B5Q13144 721 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms