RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 LIPAP38571 399 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 HALP42357 657 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 AVPR1BP47901 424 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 GATMP50440 423 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 BLOC1S1P78537 153 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 KRT72Q14CN4 511 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 PWP2Q15269 919 aaKnown RBP4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 MAPKAPK3Q16644 382 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 PFKFB4Q16877 469 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 ZACNQ401N2 412 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 TREML2Q5T2D2 321 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 TEDDM1Q5T9Z0 273 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 ARL6IP4Q66PJ3 421 aaKnown RBP4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 KAZNQ674X7 775 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 CLEC9AQ6UXN8 241 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 Q6ZNX1 250 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 KIAA0408Q6ZU52 694 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 DTX2Q86UW9 622 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 CAND1Q86VP6 1230 aaKnown RBP4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 VRK3Q8IV63 474 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 FSTL5Q8N475 847 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 LRRC71Q8N4P6 559 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 MYCT1Q8N699 235 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 C11orf44Q8N8P7 122 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 ANKRD42Q8N9B4 389 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 TRIM63Q969Q1 353 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 PRPF18Q99633 342 aaKnown RBP4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 ALG8Q9BVK2 526 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 INO80BQ9C086 356 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 ZCWPW1Q9H0M4 648 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 ZBTB26Q9HCK0 441 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 NECTIN3Q9NQS3 549 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 KLC4Q9NSK0 619 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 EHD3Q9NZN3 535 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 LRIT1Q9P2V4 623 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 DKK3Q9UBP4 350 aa4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 MORC2Q9Y6X9 1032 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC11-207ENST00000511409 ADGRA2Q96PE1 1338 aa4□□□□□ -1.77
TRAPPC11-207ENST00000511409 FER1L4A9Z1Z3 1794 aa4□□□□□ -1.77
TRAPPC11-207ENST00000511409 LGALS16A8MUM7 142 aa4□□□□□ -1.77
TRAPPC11-207ENST00000511409 MPPED1O15442 326 aa4□□□□□ -1.77
TRAPPC11-207ENST00000511409 ZSCAN9O15535 394 aaPredicted RBP4□□□□□ -1.77
TRAPPC11-207ENST00000511409 PROM1O43490 865 aa4□□□□□ -1.77
TRAPPC11-207ENST00000511409 KCNQ3O43525 872 aa4□□□□□ -1.77
TRAPPC11-207ENST00000511409 NARSO43776 548 aaKnown RBP4□□□□□ -1.77
TRAPPC11-207ENST00000511409 ZFXP17010 805 aaPredicted RBP4□□□□□ -1.77
TRAPPC11-207ENST00000511409 PDIA3P30101 505 aaKnown RBP4□□□□□ -1.77
TRAPPC11-207ENST00000511409 FOLR3P41439 243 aa4□□□□□ -1.77
TRAPPC11-207ENST00000511409 ATXN1P54253 815 aaKnown RBP4□□□□□ -1.77
TRAPPC11-207ENST00000511409 NSUN2Q08J23 767 aaKnown RBP eCLIP4□□□□□ -1.77
TRAPPC11-207ENST00000511409 BMPR2Q13873 1038 aa4□□□□□ -1.77
TRAPPC11-207ENST00000511409 SPARCL1Q14515 664 aa4□□□□□ -1.77
TRAPPC11-207ENST00000511409 TUBB8Q3ZCM7 444 aa4□□□□□ -1.77
TRAPPC11-207ENST00000511409 TMTC4Q5T4D3 741 aa4□□□□□ -1.77
TRAPPC11-207ENST00000511409 ZNF618Q5T7W0 954 aa4□□□□□ -1.77
TRAPPC11-207ENST00000511409 IGFL4Q6B9Z1 124 aa4□□□□□ -1.77
TRAPPC11-207ENST00000511409 MAVSQ7Z434 540 aa4□□□□□ -1.77
TRAPPC11-207ENST00000511409 KRT73Q86Y46 540 aa4□□□□□ -1.77
TRAPPC11-207ENST00000511409 RASGRP3Q8IV61 690 aa4□□□□□ -1.77
TRAPPC11-207ENST00000511409 ABHD5Q8WTS1 349 aa4□□□□□ -1.77
TRAPPC11-207ENST00000511409 NEU4Q8WWR8 484 aaPredicted RBP4□□□□□ -1.77
TRAPPC11-207ENST00000511409 FAM227BQ96M60 508 aa4□□□□□ -1.77
TRAPPC11-207ENST00000511409 RMDN3Q96TC7 470 aa4□□□□□ -1.77
TRAPPC11-207ENST00000511409 GDF15Q99988 308 aa4□□□□□ -1.77
TRAPPC11-207ENST00000511409 HERPUD2Q9BSE4 406 aa4□□□□□ -1.77
TRAPPC11-207ENST00000511409 PAGR1Q9BTK6 254 aa4□□□□□ -1.77
TRAPPC11-207ENST00000511409 EPS8L2Q9H6S3 715 aa4□□□□□ -1.77
TRAPPC11-207ENST00000511409 DACT1Q9NYF0 836 aa4□□□□□ -1.77
TRAPPC11-207ENST00000511409 IGSF9Q9P2J2 1179 aa4□□□□□ -1.77
TRAPPC11-207ENST00000511409 DRG1Q9Y295 367 aaKnown RBP4□□□□□ -1.77
TRAPPC11-207ENST00000511409 ADM5C9JUS6 153 aa3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 AGPSO00116 658 aa3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 EXOC5O00471 708 aa3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 TRIM38O00635 465 aa3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 NPC1O15118 1278 aa3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 NXPH3O95157 252 aa3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 TNFRSF6BO95407 300 aa3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 VIPP01282 170 aa3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 IL6RP08887 468 aaPredicted RBP3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 MST1P26927 711 aa3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 RBL1P28749 1068 aa3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 PPM1FP49593 454 aaPredicted RBP3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 MRPS35P82673 323 aaKnown RBP3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 ABHD18Q0P651 414 aa3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 MPP3Q13368 585 aa3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 PTPRRQ15256 657 aa3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 TXNRD1Q16881 649 aa3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 SLC5A9Q2M3M2 681 aa3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 P3H1Q32P28 736 aa3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 INO80DQ53TQ3 878 aaPredicted RBP3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 PLAC9Q5JTB6 97 aa3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 TTC30AQ86WT1 665 aa3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 GATAD2AQ86YP4 633 aa3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 CERS3Q8IU89 383 aa3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 ZNF384Q8TF68 577 aa3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 STYXQ8WUJ0 223 aa3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 PBKQ96KB5 322 aa3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 SCLT1Q96NL6 688 aa3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 HAPLN3Q96S86 360 aa3.99□□□□□ -1.77
TRAPPC11-207ENST00000511409 MRIQ9BWK5 157 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms