RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 FAM111AQ96PZ2 611 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 SRPK1Q96SB4 655 aaKnown RBP9.48□□□□□ -0.89
SNF8-210ENST00000511214 GLIS2Q9BZE0 524 aaPredicted RBP9.48□□□□□ -0.89
SNF8-210ENST00000511214 HAPLN2Q9GZV7 340 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 MIS12Q9H081 205 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 KRT82Q9NSB4 513 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 CISHQ9NSE2 258 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 ASNSD1Q9NWL6 643 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 PLA2G4CQ9UP65 541 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 PLLPQ9Y342 182 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 C2CD2Q9Y426 696 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 MAFBQ9Y5Q3 323 aaPredicted RBP9.48□□□□□ -0.89
SNF8-210ENST00000511214 CLRN2A0PK11 232 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 EME2A4GXA9 379 aaPredicted RBP9.47□□□□□ -0.89
SNF8-210ENST00000511214 ZNF487B1APH4 448 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 B2RBV5 119 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 KBTBD13C9JR72 458 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 PDLIM1O00151 329 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 ADCY3O60266 1144 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 SNNO75324 88 aaPredicted RBP9.47□□□□□ -0.89
SNF8-210ENST00000511214 BANF1O75531 89 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 RNF8O76064 485 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 C1QAP02745 245 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 OATP04181 439 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 RBP3P10745 1247 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 PYGBP11216 843 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 MYL4P12829 197 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 ANPEPP15144 967 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 AOC1P19801 751 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 BRD2P25440 801 aaKnown RBP9.47□□□□□ -0.89
SNF8-210ENST00000511214 ICAM3P32942 547 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 CRHR1P34998 444 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 GABRB2P47870 512 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 TUBP50607 506 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 RAB27AP51159 221 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 SOX10P56693 466 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 IRX4P78413 519 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 DSG1Q02413 1049 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 THOC5Q13769 683 aaKnown RBP9.47□□□□□ -0.89
SNF8-210ENST00000511214 PDCD2Q16342 344 aaPredicted RBP9.47□□□□□ -0.89
SNF8-210ENST00000511214 KBTBD12Q3ZCT8 623 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 ILDR2Q71H61 639 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 ZC3H18Q86VM9 953 aaKnown RBP9.47□□□□□ -0.89
SNF8-210ENST00000511214 RFX6Q8HWS3 928 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 CRLF3Q8IUI8 442 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 UNC45BQ8IWX7 931 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 CPXCR1Q8N123 301 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 KCTD6Q8NC69 237 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 AGBL3Q8NEM8 1001 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 ACMSDQ8TDX5 336 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 WDR60Q8WVS4 1066 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 NCSTNQ92542 709 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 JADE3Q92613 823 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 MRRFQ96E11 262 aaKnown RBP9.47□□□□□ -0.89
SNF8-210ENST00000511214 ZBED3Q96IU2 234 aaPredicted RBP9.47□□□□□ -0.89
SNF8-210ENST00000511214 FGD4Q96M96 766 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 OLFM3Q96PB7 478 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 GBP5Q96PP8 586 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 CCDC106Q9BWC9 280 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 GCOM2Q9BZD3 368 aaPredicted RBP9.47□□□□□ -0.89
SNF8-210ENST00000511214 TRIM4Q9C037 500 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 NMUR2Q9GZQ4 415 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 ASCC2Q9H1I8 757 aaPredicted RBP9.47□□□□□ -0.89
SNF8-210ENST00000511214 RNF146Q9NTX7 359 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 NDE1Q9NXR1 346 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 ETAA1Q9NY74 926 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 TRPC5Q9UL62 973 aaPredicted RBP9.47□□□□□ -0.89
SNF8-210ENST00000511214 CHMP2BQ9UQN3 213 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 TTLL3Q9Y4R7 772 aa9.47□□□□□ -0.89
SNF8-210ENST00000511214 IGKV6D-21A0A0A0MT36 114 aa9.46□□□□□ -0.9
SNF8-210ENST00000511214 TCRBV7S3A2A0A539 114 aa9.46□□□□□ -0.9
SNF8-210ENST00000511214 BCLAF3A2AJT9 711 aaKnown RBP9.46□□□□□ -0.9
SNF8-210ENST00000511214 TRIM49D1C9J1S8 452 aa9.46□□□□□ -0.9
SNF8-210ENST00000511214 GOLGA8RI6L899 631 aa9.46□□□□□ -0.9
SNF8-210ENST00000511214 OGTO15294 1046 aa9.46□□□□□ -0.9
SNF8-210ENST00000511214 GAS2O43903 313 aaKnown RBP9.46□□□□□ -0.9
SNF8-210ENST00000511214 FAM189A1O60320 539 aa9.46□□□□□ -0.9
SNF8-210ENST00000511214 TOM1L1O75674 476 aa9.46□□□□□ -0.9
SNF8-210ENST00000511214 RTN3O95197 1032 aaPredicted RBP9.46□□□□□ -0.9
SNF8-210ENST00000511214 KLHL2O95198 593 aa9.46□□□□□ -0.9
SNF8-210ENST00000511214 TRUB2O95900 331 aaKnown RBP9.46□□□□□ -0.9
SNF8-210ENST00000511214 TGM2P21980 687 aa9.46□□□□□ -0.9
SNF8-210ENST00000511214 IL1R2P27930 398 aa9.46□□□□□ -0.9
SNF8-210ENST00000511214 RFC1P35251 1148 aaPredicted RBP9.46□□□□□ -0.9
SNF8-210ENST00000511214 SESN3P58005 492 aa9.46□□□□□ -0.9
SNF8-210ENST00000511214 YWHAGP61981 247 aaKnown RBP eCLIP9.46□□□□□ -0.9
SNF8-210ENST00000511214 PSMC1P62191 440 aaKnown RBP9.46□□□□□ -0.9
SNF8-210ENST00000511214 BASP1P80723 227 aaKnown RBP9.46□□□□□ -0.9
SNF8-210ENST00000511214 GAD2Q05329 585 aa9.46□□□□□ -0.9
SNF8-210ENST00000511214 BST1Q10588 318 aa9.46□□□□□ -0.9
SNF8-210ENST00000511214 NAB1Q13506 487 aa9.46□□□□□ -0.9
SNF8-210ENST00000511214 TRPC3Q13507 836 aa9.46□□□□□ -0.9
SNF8-210ENST00000511214 BAATQ14032 418 aaPredicted RBP9.46□□□□□ -0.9
SNF8-210ENST00000511214 PDK2Q15119 407 aa9.46□□□□□ -0.9
SNF8-210ENST00000511214 MTERF2Q49AM1 385 aa9.46□□□□□ -0.9
SNF8-210ENST00000511214 PTPN20Q4JDL3 420 aa9.46□□□□□ -0.9
SNF8-210ENST00000511214 TEX44Q53QW1 395 aa9.46□□□□□ -0.9
SNF8-210ENST00000511214 THEMIS2Q5TEJ8 643 aa9.46□□□□□ -0.9
SNF8-210ENST00000511214 EP400NLQ6ZTU2 488 aa9.46□□□□□ -0.9
SNF8-210ENST00000511214 EXOC8Q8IYI6 725 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms