RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 EGFLAMQ63HQ2 1017 aa8.26□□□□□ -1.09
USP53-206ENST00000510737 SLC4A10Q6U841 1118 aa8.26□□□□□ -1.09
USP53-206ENST00000510737 ZNF66Q6ZN08 573 aa8.26□□□□□ -1.09
USP53-206ENST00000510737 C2CD5Q86YS7 1000 aa8.26□□□□□ -1.09
USP53-206ENST00000510737 FKBP10Q96AY3 582 aa8.26□□□□□ -1.09
USP53-206ENST00000510737 ACTRT3Q9BYD9 372 aa8.26□□□□□ -1.09
USP53-206ENST00000510737 SERHLQ9NQF3 203 aa8.26□□□□□ -1.09
USP53-206ENST00000510737 DDX21Q9NR30 783 aaKnown RBP eCLIP8.26□□□□□ -1.092e-8■■■■□ 24.8
USP53-206ENST00000510737 SERTAD4Q9NUC0 356 aa8.26□□□□□ -1.09
USP53-206ENST00000510737 ADAMTS7Q9UKP4 1686 aa8.26□□□□□ -1.09
USP53-206ENST00000510737 KDRP35968 1356 aa8.25□□□□□ -1.09
USP53-206ENST00000510737 ITGB4P16144 1822 aa8.25□□□□□ -1.09
USP53-206ENST00000510737 PDHA1P08559 390 aa8.25□□□□□ -1.09
USP53-206ENST00000510737 EBLN1P0CF75 366 aa8.25□□□□□ -1.09
USP53-206ENST00000510737 PHKA1P46020 1223 aa8.25□□□□□ -1.09
USP53-206ENST00000510737 MTMR1Q13613 665 aa8.25□□□□□ -1.09
USP53-206ENST00000510737 ODF1Q14990 250 aa8.25□□□□□ -1.09
USP53-206ENST00000510737 VPS53Q5VIR6 699 aa8.25□□□□□ -1.09
USP53-206ENST00000510737 ZNF626Q68DY1 528 aa8.25□□□□□ -1.09
USP53-206ENST00000510737 FAM109AQ8N4B1 249 aa8.25□□□□□ -1.09
USP53-206ENST00000510737 AOPEPQ8N6M6 819 aa8.25□□□□□ -1.09
USP53-206ENST00000510737 C1orf43Q9BWL3 253 aa8.25□□□□□ -1.09
USP53-206ENST00000510737 BRD9Q9H8M2 597 aa8.25□□□□□ -1.09
USP53-206ENST00000510737 MON2Q7Z3U7 1717 aa8.25□□□□□ -1.09
USP53-206ENST00000510737 TARM1B6A8C7 271 aa8.24□□□□□ -1.09
USP53-206ENST00000510737 H0YIN7 160 aa8.24□□□□□ -1.09
USP53-206ENST00000510737 CA12O43570 354 aa8.24□□□□□ -1.09
USP53-206ENST00000510737 PRR35P0CG20 571 aa8.24□□□□□ -1.09
USP53-206ENST00000510737 ZFXP17010 805 aaPredicted RBP8.24□□□□□ -1.09
USP53-206ENST00000510737 EPHX2P34913 555 aa8.24□□□□□ -1.09
USP53-206ENST00000510737 ZNF135P52742 658 aaPredicted RBP8.24□□□□□ -1.09
USP53-206ENST00000510737 RBM20Q5T481 1227 aaKnown RBP8.24□□□□□ -1.09
USP53-206ENST00000510737 C11orf87Q6NUJ2 197 aa8.24□□□□□ -1.09
USP53-206ENST00000510737 GCC1Q96CN9 775 aa8.24□□□□□ -1.09
USP53-206ENST00000510737 REPS1Q96D71 796 aa8.24□□□□□ -1.09
USP53-206ENST00000510737 COG3Q96JB2 828 aa8.24□□□□□ -1.09
USP53-206ENST00000510737 ALG8Q9BVK2 526 aa8.24□□□□□ -1.09
USP53-206ENST00000510737 GPR35Q9HC97 309 aa8.24□□□□□ -1.09
USP53-206ENST00000510737 SIDT1Q9NXL6 827 aaKnown RBP8.24□□□□□ -1.09
USP53-206ENST00000510737 EHD3Q9NZN3 535 aa8.24□□□□□ -1.09
USP53-206ENST00000510737 CFAP20Q9Y6A4 193 aaKnown RBP8.24□□□□□ -1.09
USP53-206ENST00000510737 DLEC1Q9Y238 1755 aa8.24□□□□□ -1.09
USP53-206ENST00000510737 ZNF804BA4D1E1 1349 aa8.24□□□□□ -1.09
USP53-206ENST00000510737 CCDC88AQ3V6T2 1871 aa8.23□□□□□ -1.09
USP53-206ENST00000510737 EDC4Q6P2E9 1401 aaKnown RBP8.23□□□□□ -1.09
USP53-206ENST00000510737 GABRDO14764 452 aa8.23□□□□□ -1.09
USP53-206ENST00000510737 ZNF213O14771 459 aa8.23□□□□□ -1.09
USP53-206ENST00000510737 TRIAP1O43715 76 aa8.23□□□□□ -1.09
USP53-206ENST00000510737 VPS4BO75351 444 aa8.23□□□□□ -1.09
USP53-206ENST00000510737 SERPINB2P05120 415 aa8.23□□□□□ -1.09
USP53-206ENST00000510737 CRKLP46109 303 aaKnown RBP8.23□□□□□ -1.09
USP53-206ENST00000510737 SLC10A2Q12908 348 aaPredicted RBP8.23□□□□□ -1.09
USP53-206ENST00000510737 KLF9Q13886 244 aaPredicted RBP8.23□□□□□ -1.09
USP53-206ENST00000510737 BOP1Q14137 746 aaKnown RBP8.23□□□□□ -1.09
USP53-206ENST00000510737 PPP4R3AQ6IN85 833 aa8.23□□□□□ -1.09
USP53-206ENST00000510737 HACL1Q9UJ83 578 aa8.23□□□□□ -1.09
USP53-206ENST00000510737 ATP8A1Q9Y2Q0 1164 aa8.23□□□□□ -1.09
USP53-206ENST00000510737 PROB1E7EW31 1015 aa8.22□□□□□ -1.09
USP53-206ENST00000510737 KIF20AO95235 890 aa8.22□□□□□ -1.09
USP53-206ENST00000510737 PHKG2P15735 406 aa8.22□□□□□ -1.09
USP53-206ENST00000510737 FXR1P51114 621 aaKnown RBP eCLIP8.22□□□□□ -1.09
USP53-206ENST00000510737 TCF15Q12870 199 aa8.22□□□□□ -1.09
USP53-206ENST00000510737 TBCCQ15814 346 aa8.22□□□□□ -1.09
USP53-206ENST00000510737 UAP1L1Q3KQV9 507 aa8.22□□□□□ -1.09
USP53-206ENST00000510737 TTC7BQ86TV6 843 aa8.22□□□□□ -1.09
USP53-206ENST00000510737 PNMA8AQ86V59 439 aaPredicted RBP8.22□□□□□ -1.09
USP53-206ENST00000510737 FAM90A1Q86YD7 464 aa8.22□□□□□ -1.09
USP53-206ENST00000510737 ZNF622Q969S3 477 aaKnown RBP eCLIP8.22□□□□□ -1.09
USP53-206ENST00000510737 TAOK3Q9H2K8 898 aa8.22□□□□□ -1.09
USP53-206ENST00000510737 SLAMF7Q9NQ25 335 aa8.22□□□□□ -1.09
USP53-206ENST00000510737 RLIMQ9NVW2 624 aa8.22□□□□□ -1.09
USP53-206ENST00000510737 CASP8AP2Q9UKL3 1982 aa8.22□□□□□ -1.09
USP53-206ENST00000510737 A0A0C4DFX4 3053 aa8.22□□□□□ -1.09
USP53-206ENST00000510737 PRDX5P30044 214 aa8.21□□□□□ -1.1
USP53-206ENST00000510737 CYP2C19P33261 490 aa8.21□□□□□ -1.1
USP53-206ENST00000510737 KRT85P78386 507 aa8.21□□□□□ -1.1
USP53-206ENST00000510737 PROSER3Q2NL68 480 aa8.21□□□□□ -1.1
USP53-206ENST00000510737 SUMO4Q6EEV6 95 aa8.21□□□□□ -1.1
USP53-206ENST00000510737 PPP1R32Q7Z5V6 425 aa8.21□□□□□ -1.1
USP53-206ENST00000510737 KLHDC4Q8TBB5 520 aa8.21□□□□□ -1.1
USP53-206ENST00000510737 TERF2IPQ9NYB0 399 aa8.21□□□□□ -1.1
USP53-206ENST00000510737 ZNF541Q9H0D2 1346 aa8.21□□□□□ -1.1
USP53-206ENST00000510737 A0A1W2PP64 1363 aa8.21□□□□□ -1.1
USP53-206ENST00000510737 CARMIL3Q8ND23 1372 aa8.21□□□□□ -1.1
USP53-206ENST00000510737 SMG6Q86US8 1419 aaKnown RBP8.2□□□□□ -1.1
USP53-206ENST00000510737 CLSTN1O94985 981 aa8.2□□□□□ -1.1
USP53-206ENST00000510737 FAM136AQ96C01 138 aa8.2□□□□□ -1.1
USP53-206ENST00000510737 CNPPD1Q9BV87 410 aa8.2□□□□□ -1.1
USP53-206ENST00000510737 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.2□□□□□ -1.1
USP53-206ENST00000510737 RNF123Q5XPI4 1314 aa8.2□□□□□ -1.1
USP53-206ENST00000510737 RTL1A6NKG5 1358 aa8.2□□□□□ -1.1
USP53-206ENST00000510737 INSRP06213 1382 aa8.2□□□□□ -1.1
USP53-206ENST00000510737 RAB3GAP2Q9H2M9 1393 aa8.2□□□□□ -1.1
USP53-206ENST00000510737 COL5A3P25940 1745 aaPredicted RBP8.2□□□□□ -1.1
USP53-206ENST00000510737 DICER1Q9UPY3 1922 aaKnown RBP8.19□□□□□ -1.1
USP53-206ENST00000510737 MYH14Q7Z406 1995 aaKnown RBP8.19□□□□□ -1.1
USP53-206ENST00000510737 MKI67P46013 3256 aaKnown RBP8.19□□□□□ -1.1
USP53-206ENST00000510737 ERVV-2B6SEH9 535 aa8.19□□□□□ -1.1
USP53-206ENST00000510737 TISP43B9A030 160 aa8.19□□□□□ -1.1
USP53-206ENST00000510737 PPM1DO15297 605 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms