RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 FBRSL1Q9HCM7 1045 aaKnown RBP24.33■■□□□ 1.49
SNF8-209ENST00000510558 CHORDC1Q9UHD1 332 aaPredicted RBP24.33■■□□□ 1.49
SNF8-209ENST00000510558 GPR179Q6PRD1 2367 aa24.32■■□□□ 1.48
SNF8-209ENST00000510558 FAM92AA1XBS5 289 aa24.32■■□□□ 1.48
SNF8-209ENST00000510558 K7ESF4 209 aa24.32■■□□□ 1.48
SNF8-209ENST00000510558 SLC16A3O15427 465 aaKnown RBP24.32■■□□□ 1.48
SNF8-209ENST00000510558 NFATC1O95644 943 aa24.32■■□□□ 1.48
SNF8-209ENST00000510558 EGFP01133 1207 aa24.32■■□□□ 1.48
SNF8-209ENST00000510558 MBL2P11226 248 aaPredicted RBP24.32■■□□□ 1.48
SNF8-209ENST00000510558 NR1H3Q13133 447 aa24.32■■□□□ 1.48
SNF8-209ENST00000510558 PKN3Q6P5Z2 889 aa24.32■■□□□ 1.48
SNF8-209ENST00000510558 ELOA2Q8IYF1 753 aaPredicted RBP24.32■■□□□ 1.48
SNF8-209ENST00000510558 WHAMMQ8TF30 809 aa24.32■■□□□ 1.48
SNF8-209ENST00000510558 HNRNPABQ99729 332 aaKnown RBP24.32■■□□□ 1.48
SNF8-209ENST00000510558 RAB20Q9NX57 234 aa24.32■■□□□ 1.48
SNF8-209ENST00000510558 GMIPQ9P107 970 aa24.32■■□□□ 1.48
SNF8-209ENST00000510558 SMG5Q9UPR3 1016 aaKnown RBP24.32■■□□□ 1.48
SNF8-209ENST00000510558 KIAA1549LQ6ZVL6 1849 aa24.32■■□□□ 1.48
SNF8-209ENST00000510558 TRIM49BA6NDI0 452 aa24.31■■□□□ 1.48
SNF8-209ENST00000510558 COCHO43405 550 aa24.31■■□□□ 1.48
SNF8-209ENST00000510558 DRD1P21728 446 aa24.31■■□□□ 1.48
SNF8-209ENST00000510558 LRRC63Q05C16 580 aa24.31■■□□□ 1.48
SNF8-209ENST00000510558 DCAF17Q5H9S7 520 aaPredicted RBP24.31■■□□□ 1.48
SNF8-209ENST00000510558 HECTD3Q5T447 861 aa24.31■■□□□ 1.48
SNF8-209ENST00000510558 TCERG1LQ5VWI1 586 aa24.31■■□□□ 1.48
SNF8-209ENST00000510558 SNX30Q5VWJ9 437 aa24.31■■□□□ 1.48
SNF8-209ENST00000510558 FILIP1Q7Z7B0 1213 aa24.31■■□□□ 1.48
SNF8-209ENST00000510558 DDX42Q86XP3 938 aaKnown RBP eCLIP24.31■■□□□ 1.48
SNF8-209ENST00000510558 KIAA1958Q8N8K9 716 aa24.31■■□□□ 1.48
SNF8-209ENST00000510558 CD101Q93033 1021 aa24.31■■□□□ 1.48
SNF8-209ENST00000510558 CYFIP2Q96F07 1278 aa24.31■■□□□ 1.48
SNF8-209ENST00000510558 CFAP97Q9P2B7 532 aa24.31■■□□□ 1.48
SNF8-209ENST00000510558 MYOFQ9NZM1 2061 aa24.3■■□□□ 1.48
SNF8-209ENST00000510558 CHURC1-FNTBB4DL54 471 aa24.3■■□□□ 1.48
SNF8-209ENST00000510558 FNTBP49356 437 aa24.3■■□□□ 1.48
SNF8-209ENST00000510558 DMWDQ09019 674 aa24.3■■□□□ 1.48
SNF8-209ENST00000510558 STIM1Q13586 685 aa24.3■■□□□ 1.48
SNF8-209ENST00000510558 ISM2Q6H9L7 571 aa24.3■■□□□ 1.48
SNF8-209ENST00000510558 CLEC20AQ6ZU45 233 aa24.3■■□□□ 1.48
SNF8-209ENST00000510558 DCLK2Q8N568 766 aa24.3■■□□□ 1.48
SNF8-209ENST00000510558 FAXDC2Q96IV6 333 aa24.3■■□□□ 1.48
SNF8-209ENST00000510558 DNAI2Q9GZS0 605 aa24.3■■□□□ 1.48
SNF8-209ENST00000510558 FBXO44Q9H4M3 255 aa24.3■■□□□ 1.48
SNF8-209ENST00000510558 NCDNQ9UBB6 729 aa24.3■■□□□ 1.48
SNF8-209ENST00000510558 MAN1B1Q9UKM7 699 aa24.3■■□□□ 1.48
SNF8-209ENST00000510558 ZNF292O60281 2723 aa24.29■■□□□ 1.48
SNF8-209ENST00000510558 SLC9A3R1O14745 358 aaPredicted RBP24.29■■□□□ 1.48
SNF8-209ENST00000510558 PSMA7O14818 248 aa24.29■■□□□ 1.48
SNF8-209ENST00000510558 SCAMP3O14828 347 aaKnown RBP24.29■■□□□ 1.48
SNF8-209ENST00000510558 RNF40O75150 1001 aa24.29■■□□□ 1.48
SNF8-209ENST00000510558 ZDHHC11BP0C7U3 371 aa24.29■■□□□ 1.48
SNF8-209ENST00000510558 TUBP50607 506 aa24.29■■□□□ 1.48
SNF8-209ENST00000510558 CBWD6Q4V339 395 aa24.29■■□□□ 1.48
SNF8-209ENST00000510558 CBWD3Q5JTY5 395 aa24.29■■□□□ 1.48
SNF8-209ENST00000510558 CBWD5Q5RIA9 395 aa24.29■■□□□ 1.48
SNF8-209ENST00000510558 GPRIN1Q7Z2K8 1008 aa24.29■■□□□ 1.48
SNF8-209ENST00000510558 JAKMIP2Q96AA8 810 aa24.29■■□□□ 1.48
SNF8-209ENST00000510558 CCSER2Q9H7U1 834 aa24.29■■□□□ 1.48
SNF8-209ENST00000510558 HHLA1C9JL84 531 aa24.28■■□□□ 1.48
SNF8-209ENST00000510558 GADD45BO75293 160 aaPredicted RBP24.28■■□□□ 1.48
SNF8-209ENST00000510558 CYP17A1P05093 508 aa24.28■■□□□ 1.48
SNF8-209ENST00000510558 FBXO43Q4G163 708 aa24.28■■□□□ 1.48
SNF8-209ENST00000510558 ZNF394Q53GI3 561 aa24.28■■□□□ 1.48
SNF8-209ENST00000510558 HEATR6Q6AI08 1181 aaKnown RBP24.28■■□□□ 1.48
SNF8-209ENST00000510558 LONP2Q86WA8 852 aa24.28■■□□□ 1.48
SNF8-209ENST00000510558 DHTKD1Q96HY7 919 aaPredicted RBP24.28■■□□□ 1.48
SNF8-209ENST00000510558 ZFRQ96KR1 1074 aaKnown RBP24.28■■□□□ 1.48
SNF8-209ENST00000510558 CISHQ9NSE2 258 aa24.28■■□□□ 1.48
SNF8-209ENST00000510558 ARMCX3Q9UH62 379 aaPredicted RBP24.28■■□□□ 1.48
SNF8-209ENST00000510558 CIZ1Q9ULV3 898 aaPredicted RBP24.28■■□□□ 1.48
SNF8-209ENST00000510558 SPTBN4Q9H254 2564 aa24.28■■□□□ 1.48
SNF8-209ENST00000510558 ATG13O75143 517 aa24.27■■□□□ 1.48
SNF8-209ENST00000510558 CD44P16070 742 aaKnown RBP24.27■■□□□ 1.48
SNF8-209ENST00000510558 HOXA6P31267 233 aa24.27■■□□□ 1.48
SNF8-209ENST00000510558 HOXC13P31276 330 aa24.27■■□□□ 1.48
SNF8-209ENST00000510558 PGFP49763 221 aa24.27■■□□□ 1.48
SNF8-209ENST00000510558 GAB4Q2WGN9 574 aa24.27■■□□□ 1.48
SNF8-209ENST00000510558 PPP1R26Q5T8A7 1209 aaPredicted RBP24.27■■□□□ 1.48
SNF8-209ENST00000510558 KIAA2013Q8IYS2 634 aa24.27■■□□□ 1.48
SNF8-209ENST00000510558 ADGRG2Q8IZP9 1017 aa24.27■■□□□ 1.48
SNF8-209ENST00000510558 TTC39CQ8N584 583 aa24.27■■□□□ 1.48
SNF8-209ENST00000510558 EZH1Q92800 747 aaPredicted RBP24.27■■□□□ 1.48
SNF8-209ENST00000510558 TATDN2Q93075 761 aa24.27■■□□□ 1.48
SNF8-209ENST00000510558 ARID3AQ99856 593 aa24.27■■□□□ 1.48
SNF8-209ENST00000510558 PNPLA8Q9NP80 782 aa24.27■■□□□ 1.48
SNF8-209ENST00000510558 TLR8Q9NR97 1041 aaKnown RBP24.27■■□□□ 1.48
SNF8-209ENST00000510558 COQ4Q9Y3A0 265 aa24.27■■□□□ 1.48
SNF8-209ENST00000510558 E2F8A0AVK6 867 aa24.26■■□□□ 1.47
SNF8-209ENST00000510558 TLR5O60602 858 aa24.26■■□□□ 1.47
SNF8-209ENST00000510558 OPRD1P41143 372 aa24.26■■□□□ 1.47
SNF8-209ENST00000510558 PPP1R2P41236 205 aa24.26■■□□□ 1.47
SNF8-209ENST00000510558 DHCR24Q15392 516 aa24.26■■□□□ 1.47
SNF8-209ENST00000510558 SLC35C1Q96A29 364 aa24.26■■□□□ 1.47
SNF8-209ENST00000510558 HEXIM2Q96MH2 286 aaKnown RBP24.26■■□□□ 1.47
SNF8-209ENST00000510558 TBC1D14Q9P2M4 693 aa24.26■■□□□ 1.47
SNF8-209ENST00000510558 RAB23Q9ULC3 237 aa24.26■■□□□ 1.47
SNF8-209ENST00000510558 SCML2Q9UQR0 700 aa24.26■■□□□ 1.47
SNF8-209ENST00000510558 ACO1P21399 889 aaKnown RBP24.25■■□□□ 1.47
SNF8-209ENST00000510558 KLHL10Q6JEL2 608 aa24.25■■□□□ 1.47
SNF8-209ENST00000510558 SECISBP2LQ93073 1101 aaKnown RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms