RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 F5P12259 2224 aa12.41□□□□□ -0.42
HMGXB3-203ENST00000510472 ZNF318Q5VUA4 2279 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 KANSL1LA0AUZ9 987 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 BECN2A8MW95 431 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 TULP2O00295 520 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 COCHO43405 550 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 GABBR2O75899 941 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 PRKCSHP14314 528 aaPredicted RBP12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 ZNF18P17022 549 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 PDE6CP51160 858 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 TYRO3Q06418 890 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 PDE4CQ08493 712 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 KLHL40Q2TBA0 621 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 SGO2Q562F6 1265 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 HSP90AA4PQ58FG1 418 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 PM20D1Q6GTS8 502 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 GJB7Q6PEY0 223 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 CCDC186Q7Z3E2 898 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 SCD5Q86SK9 330 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 PIGZQ86VD9 579 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 YAF2Q8IY57 180 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 ZNF276Q8N554 614 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 RBBP8NLQ8NC74 664 aaPredicted RBP12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 FLCNQ8NFG4 579 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 SH3RF2Q8TEC5 729 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 SLC35F5Q8WV83 523 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 ZFYVE19Q96K21 471 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 ZFRQ96KR1 1074 aaKnown RBP12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 FAM81BQ96LP2 452 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 FUCA2Q9BTY2 467 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 MFSD1Q9H3U5 465 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 NMUR1Q9HB89 426 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 HPS4Q9NQG7 708 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 THG1LQ9NWX6 298 aaKnown RBP12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 APEX2Q9UBZ4 518 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 TSPAN16Q9UKR8 245 aa12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 MTF2Q9Y483 593 aaPredicted RBP12.4□□□□□ -0.42
HMGXB3-203ENST00000510472 OTOL1A6NHN0 477 aaPredicted RBP12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 XPO1O14980 1071 aaKnown RBP12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 CYP26A1O43174 497 aa12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 CALCAP01258 141 aa12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 CKMP06732 381 aa12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 CD19P15391 556 aa12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 CD72P21854 359 aa12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 BCAT1P54687 386 aa12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 MFAP3P55082 362 aa12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 TNK2Q07912 1038 aa12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 IFRD2Q12894 506 aaPredicted RBP12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 GOLGA7BQ2TAP0 167 aa12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 HECTD3Q5T447 861 aa12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 CAVIN1Q6NZI2 390 aaKnown RBP12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 TPRG1Q6ZUI0 275 aa12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 BHLHA9Q7RTU4 235 aa12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 PJA1Q8NG27 643 aa12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 KCTD13Q8WZ19 329 aa12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 SHC3Q92529 594 aa12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 CLDN23Q96B33 292 aa12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 CHFRQ96EP1 664 aa12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 NELL2Q99435 816 aa12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 FOXQ1Q9C009 403 aa12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 LINC00597Q9H2U6 94 aa12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 CCSER2Q9H7U1 834 aa12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 LTB4R2Q9NPC1 389 aa12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 CYLDQ9NQC7 956 aa12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 AJAP1Q9UKB5 411 aaPredicted RBP12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 SIT1Q9Y3P8 196 aa12.39□□□□□ -0.43
HMGXB3-203ENST00000510472 LEFTY2O00292 366 aa12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 MAN2B1O00754 1011 aa12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 GREM1O60565 184 aa12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 TBX18O95935 607 aa12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 ABL1P00519 1130 aa12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 TARSP26639 723 aaKnown RBP12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 PLA2G4AP47712 749 aa12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 RPL34P49207 117 aaKnown RBP12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 MYL5Q02045 173 aa12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 BST2Q10589 180 aaKnown RBP12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 RUNX3Q13761 415 aa12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 MTF1Q14872 753 aa12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 PDGFRLQ15198 375 aa12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 KRT31Q15323 416 aa12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 STILQ15468 1287 aa12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 KLHDC10Q6PID8 442 aa12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 ZNF852Q6ZMS4 543 aa12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 APTXQ7Z2E3 356 aaKnown RBP12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 CCDC105Q8IYK2 499 aa12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 SCML4Q8N228 414 aa12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 UBA3Q8TBC4 463 aa12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 OSCP1Q8WVF1 389 aa12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 MSANTD3Q96H12 275 aa12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 NAA15Q9BXJ9 866 aaKnown RBP12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 C8orf33Q9H7E9 229 aaPredicted RBP12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 TLR8Q9NR97 1041 aaKnown RBP12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 GTSE1Q9NYZ3 720 aa12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 CLIC5Q9NZA1 410 aa12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 LIMA1Q9UHB6 759 aaKnown RBP12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 CPQQ9Y646 472 aa12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 PIAS3Q9Y6X2 628 aa12.38□□□□□ -0.43
HMGXB3-203ENST00000510472 GREB1Q4ZG55 1949 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms