RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 USP15Q9Y4E8 981 aaPredicted RBP15.61■□□□□ 0.09
RNF4-213ENST00000509388 PLXNA3P51805 1871 aa15.61■□□□□ 0.09
RNF4-213ENST00000509388 SSU72P8A0A1W2PR75 194 aa15.6■□□□□ 0.09
RNF4-213ENST00000509388 A0A1W2PRU2 124 aa15.6■□□□□ 0.09
RNF4-213ENST00000509388 FAM170AA1A519 330 aa15.6■□□□□ 0.09
RNF4-213ENST00000509388 E5RJQ4 531 aa15.6■□□□□ 0.09
RNF4-213ENST00000509388 UNGP13051 313 aaPredicted RBP15.6■□□□□ 0.09
RNF4-213ENST00000509388 EPHA5P54756 1037 aa15.6■□□□□ 0.09
RNF4-213ENST00000509388 CDK17Q00537 523 aa15.6■□□□□ 0.09
RNF4-213ENST00000509388 CBX2Q14781 532 aaPredicted RBP15.6■□□□□ 0.09
RNF4-213ENST00000509388 OR6B2Q6IFH4 312 aa15.6■□□□□ 0.09
RNF4-213ENST00000509388 ACAD10Q6JQN1 1059 aa15.6■□□□□ 0.09
RNF4-213ENST00000509388 CCDC186Q7Z3E2 898 aa15.6■□□□□ 0.09
RNF4-213ENST00000509388 MON1AQ86VX9 555 aa15.6■□□□□ 0.09
RNF4-213ENST00000509388 TMC8Q8IU68 726 aa15.6■□□□□ 0.09
RNF4-213ENST00000509388 TMTC1Q8IUR5 882 aa15.6■□□□□ 0.09
RNF4-213ENST00000509388 SCUBE3Q8IX30 993 aa15.6■□□□□ 0.09
RNF4-213ENST00000509388 SLC30A5Q8TAD4 765 aa15.6■□□□□ 0.09
RNF4-213ENST00000509388 OVCA2Q8WZ82 227 aa15.6■□□□□ 0.09
RNF4-213ENST00000509388 CPXM1Q96SM3 734 aa15.6■□□□□ 0.09
RNF4-213ENST00000509388 CHP1Q99653 195 aa15.6■□□□□ 0.09
RNF4-213ENST00000509388 NHEJ1Q9H9Q4 299 aaPredicted RBP15.6■□□□□ 0.09
RNF4-213ENST00000509388 ZNF334Q9HCZ1 680 aaPredicted RBP15.6■□□□□ 0.09
RNF4-213ENST00000509388 AVENQ9NQS1 362 aaPredicted RBP15.6■□□□□ 0.09
RNF4-213ENST00000509388 IL37Q9NZH6 218 aa15.6■□□□□ 0.09
RNF4-213ENST00000509388 ADAM22Q9P0K1 906 aa15.6■□□□□ 0.09
RNF4-213ENST00000509388 CYTH4Q9UIA0 394 aa15.6■□□□□ 0.09
RNF4-213ENST00000509388 USP3Q9Y6I4 520 aa15.6■□□□□ 0.09
RNF4-213ENST00000509388 CLUHO75153 1309 aa15.6■□□□□ 0.09
RNF4-213ENST00000509388 TRANK1O15050 2925 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 ATG2AQ2TAZ0 1938 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 DDX3XO00571 662 aaKnown RBP eCLIP15.59■□□□□ 0.092e-8■■■□□ 17.9
RNF4-213ENST00000509388 MBTPS2O43462 519 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 NRDCO43847 1150 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 CALB1P05937 261 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 PTMAP06454 111 aaKnown RBP15.59■□□□□ 0.09
RNF4-213ENST00000509388 GZMAP12544 262 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 PSEN1P49768 467 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 MRPS5P82675 430 aaKnown RBP15.59■□□□□ 0.09
RNF4-213ENST00000509388 CENPCQ03188 943 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 MAPK8IP2Q13387 824 aaPredicted RBP15.59■□□□□ 0.09
RNF4-213ENST00000509388 PTPN20Q4JDL3 420 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 PTCRAQ6ISU1 281 aaPredicted RBP15.59■□□□□ 0.09
RNF4-213ENST00000509388 MMS22LQ6ZRQ5 1243 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 TOGARAM2Q6ZUX3 1019 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 GET4Q7L5D6 327 aaPredicted RBP15.59■□□□□ 0.09
RNF4-213ENST00000509388 ZDHHC17Q8IUH5 632 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 FEZF2Q8TBJ5 459 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 IRGQQ8WZA9 623 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 BAG1Q99933 345 aaPredicted RBP15.59■□□□□ 0.09
RNF4-213ENST00000509388 C11orf70Q9BRQ4 267 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 SYT11Q9BT88 431 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 LRRC3Q9BY71 257 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 NACA2Q9H009 215 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 SLITRK6Q9H5Y7 841 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 TRPC7Q9HCX4 862 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 PRDM6Q9NQX0 595 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 GMIPQ9P107 970 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 THEGQ9P2T0 379 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 CDH22Q9UJ99 828 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 NAGPAQ9UK23 515 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 STRIP2Q9ULQ0 834 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 CDH23Q9H251 3354 aa15.59■□□□□ 0.09
RNF4-213ENST00000509388 FAM92AA1XBS5 289 aa15.58■□□□□ 0.08
RNF4-213ENST00000509388 ZNF840PA6NDX5 716 aa15.58■□□□□ 0.08
RNF4-213ENST00000509388 GRXCR2A6NFK2 248 aa15.58■□□□□ 0.08
RNF4-213ENST00000509388 RTN2O75298 545 aa15.58■□□□□ 0.08
RNF4-213ENST00000509388 F11P03951 625 aa15.58■□□□□ 0.08
RNF4-213ENST00000509388 ERBB2P04626 1255 aa15.58■□□□□ 0.08
RNF4-213ENST00000509388 RALAP11233 206 aa15.58■□□□□ 0.08
RNF4-213ENST00000509388 GJA1P17302 382 aa15.58■□□□□ 0.08
RNF4-213ENST00000509388 MMP8P22894 467 aa15.58■□□□□ 0.08
RNF4-213ENST00000509388 GBP2P32456 591 aaPredicted RBP15.58■□□□□ 0.08
RNF4-213ENST00000509388 RPL34P49207 117 aaKnown RBP15.58■□□□□ 0.08
RNF4-213ENST00000509388 DAOAP59103 153 aa15.58■□□□□ 0.08
RNF4-213ENST00000509388 YWHAGP61981 247 aaKnown RBP eCLIP15.58■□□□□ 0.08
RNF4-213ENST00000509388 TEAD2Q15562 447 aa15.58■□□□□ 0.08
RNF4-213ENST00000509388 EFHC1Q5JVL4 640 aa15.58■□□□□ 0.08
RNF4-213ENST00000509388 CCDC122Q5T0U0 273 aa15.58■□□□□ 0.08
RNF4-213ENST00000509388 BTBD8Q5XKL5 378 aa15.58■□□□□ 0.08
RNF4-213ENST00000509388 PM20D1Q6GTS8 502 aa15.58■□□□□ 0.08
RNF4-213ENST00000509388 GAREM2Q75VX8 874 aa15.58■□□□□ 0.08
RNF4-213ENST00000509388 TADA2BQ86TJ2 420 aa15.58■□□□□ 0.08
RNF4-213ENST00000509388 PHF13Q86YI8 300 aaPredicted RBP15.58■□□□□ 0.08
RNF4-213ENST00000509388 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.58■□□□□ 0.08
RNF4-213ENST00000509388 SHKBP1Q8TBC3 707 aa15.58■□□□□ 0.08
RNF4-213ENST00000509388 SUSD6Q92537 303 aa15.58■□□□□ 0.08
RNF4-213ENST00000509388 FAM149B1Q96BN6 582 aa15.58■□□□□ 0.08
RNF4-213ENST00000509388 TCEAL4Q96EI5 215 aa15.58■□□□□ 0.08
RNF4-213ENST00000509388 TRIM62Q9BVG3 475 aa15.58■□□□□ 0.08
RNF4-213ENST00000509388 IL21Q9HBE4 155 aa15.58■□□□□ 0.08
RNF4-213ENST00000509388 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.58■□□□□ 0.08
RNF4-213ENST00000509388 WDR35Q9P2L0 1181 aa15.58■□□□□ 0.08
RNF4-213ENST00000509388 ZMYM5Q9UJ78 669 aa15.58■□□□□ 0.08
RNF4-213ENST00000509388 A0A087X0T9 212 aa15.57■□□□□ 0.08
RNF4-213ENST00000509388 A0A1W2PQH9 124 aa15.57■□□□□ 0.08
RNF4-213ENST00000509388 CAPN9O14815 690 aa15.57■□□□□ 0.08
RNF4-213ENST00000509388 PAPSS1O43252 624 aaPredicted RBP15.57■□□□□ 0.08
RNF4-213ENST00000509388 IPO7O95373 1038 aaKnown RBP15.57■□□□□ 0.08
RNF4-213ENST00000509388 FTLP02792 175 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms