RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 CSRP2Q16527 193 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 NFIL3Q16649 462 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 HECTD3Q5T447 861 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 SPOPLQ6IQ16 392 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 RHBDF2Q6PJF5 856 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 CACNA2D4Q7Z3S7 1137 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.26□□□□□ -0.29
PDPN-208ENST00000509009 UNC93AQ86WB7 457 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 PDZD8Q8NEN9 1154 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 ZMIZ2Q8NF64 920 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 USP33Q8TEY7 942 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 SMARCD1Q96GM5 515 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 SMOQ99835 787 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 GOLPH3LQ9H4A5 285 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 CSNK1G1Q9HCP0 422 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 DMAP1Q9NPF5 467 aaPredicted RBP13.26□□□□□ -0.29
PDPN-208ENST00000509009 ATP6V1DQ9Y5K8 247 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 E2F8A0AVK6 867 aa13.25□□□□□ -0.29
PDPN-208ENST00000509009 DCDC2BA2VCK2 349 aa13.25□□□□□ -0.29
PDPN-208ENST00000509009 SCAMP3O14828 347 aaKnown RBP13.25□□□□□ -0.29
PDPN-208ENST00000509009 AXIN1O15169 862 aa13.25□□□□□ -0.29
PDPN-208ENST00000509009 COCHO43405 550 aa13.25□□□□□ -0.29
PDPN-208ENST00000509009 AKAP3O75969 853 aa13.25□□□□□ -0.29
PDPN-208ENST00000509009 CLSTN1O94985 981 aa13.25□□□□□ -0.29
PDPN-208ENST00000509009 CYP17A1P05093 508 aa13.25□□□□□ -0.29
PDPN-208ENST00000509009 CCDC130P13994 396 aa13.25□□□□□ -0.29
PDPN-208ENST00000509009 ASPAP45381 313 aa13.25□□□□□ -0.29
PDPN-208ENST00000509009 SLC6A11P48066 632 aa13.25□□□□□ -0.29
PDPN-208ENST00000509009 SLC5A3P53794 718 aa13.25□□□□□ -0.29
PDPN-208ENST00000509009 PPP3CAQ08209 521 aa13.25□□□□□ -0.29
PDPN-208ENST00000509009 ORC1Q13415 861 aa13.25□□□□□ -0.29
PDPN-208ENST00000509009 ADAM9Q13443 819 aa13.25□□□□□ -0.29
PDPN-208ENST00000509009 DMC1Q14565 340 aa13.25□□□□□ -0.29
PDPN-208ENST00000509009 KBTBD6Q86V97 674 aa13.25□□□□□ -0.29
PDPN-208ENST00000509009 DDX42Q86XP3 938 aaKnown RBP eCLIP13.25□□□□□ -0.29
PDPN-208ENST00000509009 GUF1Q8N442 669 aaKnown RBP13.25□□□□□ -0.29
PDPN-208ENST00000509009 C12orf29Q8N999 325 aa13.25□□□□□ -0.29
PDPN-208ENST00000509009 CCDC26Q8TAB7 109 aa13.25□□□□□ -0.29
PDPN-208ENST00000509009 SLC2A14Q8TDB8 520 aa13.25□□□□□ -0.29
PDPN-208ENST00000509009 LOXL4Q96JB6 756 aa13.25□□□□□ -0.29
PDPN-208ENST00000509009 ZFRQ96KR1 1074 aaKnown RBP13.25□□□□□ -0.29
PDPN-208ENST00000509009 HHIPQ96QV1 700 aa13.25□□□□□ -0.29
PDPN-208ENST00000509009 APOBEC3GQ9HC16 384 aaKnown RBP13.25□□□□□ -0.29
PDPN-208ENST00000509009 HMGXB4Q9UGU5 601 aa13.25□□□□□ -0.29
PDPN-208ENST00000509009 EBF1Q9UH73 591 aa13.25□□□□□ -0.29
PDPN-208ENST00000509009 CDV3Q9UKY7 258 aaKnown RBP13.25□□□□□ -0.29
PDPN-208ENST00000509009 A0A0A0MRY4 1105 aa13.24□□□□□ -0.29
PDPN-208ENST00000509009 APBB3O95704 486 aa13.24□□□□□ -0.29
PDPN-208ENST00000509009 NR2F2P24468 414 aa13.24□□□□□ -0.29
PDPN-208ENST00000509009 RPL13P26373 211 aaKnown RBP13.24□□□□□ -0.29
PDPN-208ENST00000509009 PSMC2P35998 433 aaKnown RBP13.24□□□□□ -0.29
PDPN-208ENST00000509009 GCLMP48507 274 aa13.24□□□□□ -0.29
PDPN-208ENST00000509009 PGFP49763 221 aa13.24□□□□□ -0.29
PDPN-208ENST00000509009 MAP3K7CLP57077 242 aa13.24□□□□□ -0.29
PDPN-208ENST00000509009 ENPEPQ07075 957 aa13.24□□□□□ -0.29
PDPN-208ENST00000509009 MESP2Q0VG99 397 aa13.24□□□□□ -0.29
PDPN-208ENST00000509009 C2orf27AQ580R0 203 aa13.24□□□□□ -0.29
PDPN-208ENST00000509009 PRR23CQ6ZRP0 262 aa13.24□□□□□ -0.29
PDPN-208ENST00000509009 INTS8Q75QN2 995 aaKnown RBP13.24□□□□□ -0.29
PDPN-208ENST00000509009 TAS1R2Q8TE23 839 aa13.24□□□□□ -0.29
PDPN-208ENST00000509009 ZC3H10Q96K80 434 aaKnown RBP13.24□□□□□ -0.29
PDPN-208ENST00000509009 HNRNPABQ99729 332 aaKnown RBP13.24□□□□□ -0.29
PDPN-208ENST00000509009 RTKNQ9BST9 563 aa13.24□□□□□ -0.29
PDPN-208ENST00000509009 ARRDC1-AS1Q9H2J1 176 aa13.24□□□□□ -0.29
PDPN-208ENST00000509009 CCSER2Q9H7U1 834 aa13.24□□□□□ -0.29
PDPN-208ENST00000509009 CYP3A43Q9HB55 503 aa13.24□□□□□ -0.29
PDPN-208ENST00000509009 GDPD2Q9HCC8 539 aa13.24□□□□□ -0.29
PDPN-208ENST00000509009 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.24□□□□□ -0.29
PDPN-208ENST00000509009 KRT82Q9NSB4 513 aa13.24□□□□□ -0.29
PDPN-208ENST00000509009 GMIPQ9P107 970 aa13.24□□□□□ -0.29
PDPN-208ENST00000509009 TBC1D14Q9P2M4 693 aa13.24□□□□□ -0.29
PDPN-208ENST00000509009 GTF3C3Q9Y5Q9 886 aa13.24□□□□□ -0.29
PDPN-208ENST00000509009 CNOT1A5YKK6 2376 aaKnown RBP13.23□□□□□ -0.29
PDPN-208ENST00000509009 TPRP12270 2363 aaKnown RBP13.23□□□□□ -0.29
PDPN-208ENST00000509009 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.23□□□□□ -0.29
PDPN-208ENST00000509009 GDF9O60383 454 aa13.23□□□□□ -0.29
PDPN-208ENST00000509009 TRIM49P0CI25 452 aa13.23□□□□□ -0.29
PDPN-208ENST00000509009 TRIM49CP0CI26 452 aa13.23□□□□□ -0.29
PDPN-208ENST00000509009 CCDC192P0DO97 292 aa13.23□□□□□ -0.29
PDPN-208ENST00000509009 KRT13P13646 458 aa13.23□□□□□ -0.29
PDPN-208ENST00000509009 PIK3CAP42336 1068 aa13.23□□□□□ -0.29
PDPN-208ENST00000509009 TUBP50607 506 aa13.23□□□□□ -0.29
PDPN-208ENST00000509009 SEC13P55735 322 aa13.23□□□□□ -0.29
PDPN-208ENST00000509009 INCA1Q0VD86 236 aa13.23□□□□□ -0.29
PDPN-208ENST00000509009 PLK5Q496M5 336 aa13.23□□□□□ -0.29
PDPN-208ENST00000509009 ZCWPW2Q504Y3 356 aa13.23□□□□□ -0.29
PDPN-208ENST00000509009 LY6G5CQ5SRR4 150 aa13.23□□□□□ -0.29
PDPN-208ENST00000509009 SFTPA1Q8IWL2 248 aa13.23□□□□□ -0.29
PDPN-208ENST00000509009 FAM186BQ8IYM0 893 aa13.23□□□□□ -0.29
PDPN-208ENST00000509009 CCDC33Q8N5R6 958 aa13.23□□□□□ -0.29
PDPN-208ENST00000509009 NETO1Q8TDF5 533 aa13.23□□□□□ -0.29
PDPN-208ENST00000509009 WHAMMQ8TF30 809 aa13.23□□□□□ -0.29
PDPN-208ENST00000509009 WBP2Q969T9 261 aa13.23□□□□□ -0.29
PDPN-208ENST00000509009 ACDQ96AP0 544 aa13.23□□□□□ -0.29
PDPN-208ENST00000509009 CYFIP2Q96F07 1278 aa13.23□□□□□ -0.29
PDPN-208ENST00000509009 TWNKQ96RR1 684 aa13.23□□□□□ -0.29
PDPN-208ENST00000509009 PNKPQ96T60 521 aa13.23□□□□□ -0.29
PDPN-208ENST00000509009 FBXO44Q9H4M3 255 aa13.23□□□□□ -0.29
PDPN-208ENST00000509009 FAM49BQ9NUQ9 324 aa13.23□□□□□ -0.29
PDPN-208ENST00000509009 HHLA1C9JL84 531 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms