RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 PCDHB4Q9Y5E5 795 aa19.2■□□□□ 0.66
CLDND1-220ENST00000508902 USP3Q9Y6I4 520 aa19.2■□□□□ 0.66
CLDND1-220ENST00000508902 SCAMP3O14828 347 aaKnown RBP19.19■□□□□ 0.66
CLDND1-220ENST00000508902 COCHO43405 550 aa19.19■□□□□ 0.66
CLDND1-220ENST00000508902 CKMP06732 381 aa19.19■□□□□ 0.66
CLDND1-220ENST00000508902 DCNP07585 359 aaKnown RBP19.19■□□□□ 0.66
CLDND1-220ENST00000508902 USP17L7P0C7H9 530 aa19.19■□□□□ 0.66
CLDND1-220ENST00000508902 HDCP19113 662 aa19.19■□□□□ 0.66
CLDND1-220ENST00000508902 CLCN5P51795 746 aa19.19■□□□□ 0.66
CLDND1-220ENST00000508902 SLC7A9P82251 487 aa19.19■□□□□ 0.66
CLDND1-220ENST00000508902 PFKPQ01813 784 aa19.19■□□□□ 0.66
CLDND1-220ENST00000508902 TYRO3Q06418 890 aa19.19■□□□□ 0.66
CLDND1-220ENST00000508902 PDE4CQ08493 712 aa19.19■□□□□ 0.66
CLDND1-220ENST00000508902 TCF15Q12870 199 aa19.19■□□□□ 0.66
CLDND1-220ENST00000508902 TPD52L1Q16890 204 aaPredicted RBP19.19■□□□□ 0.66
CLDND1-220ENST00000508902 TCP11X2Q5H9J9 407 aa19.19■□□□□ 0.66
CLDND1-220ENST00000508902 RAB41Q5JT25 222 aa19.19■□□□□ 0.66
CLDND1-220ENST00000508902 NAIF1Q69YI7 327 aaPredicted RBP19.19■□□□□ 0.66
CLDND1-220ENST00000508902 CAVIN1Q6NZI2 390 aaKnown RBP19.19■□□□□ 0.66
CLDND1-220ENST00000508902 PIGZQ86VD9 579 aa19.19■□□□□ 0.66
CLDND1-220ENST00000508902 ANKRD52Q8NB46 1076 aa19.19■□□□□ 0.66
CLDND1-220ENST00000508902 PJA1Q8NG27 643 aa19.19■□□□□ 0.66
CLDND1-220ENST00000508902 SH3RF2Q8TEC5 729 aa19.19■□□□□ 0.66
CLDND1-220ENST00000508902 OVCA2Q8WZ82 227 aa19.19■□□□□ 0.66
CLDND1-220ENST00000508902 IRF7Q92985 503 aa19.19■□□□□ 0.66
CLDND1-220ENST00000508902 SLITRK1Q96PX8 696 aa19.19■□□□□ 0.66
CLDND1-220ENST00000508902 NDST4Q9H3R1 872 aa19.19■□□□□ 0.66
CLDND1-220ENST00000508902 MFSD1Q9H3U5 465 aa19.19■□□□□ 0.66
CLDND1-220ENST00000508902 KIF9Q9HAQ2 790 aa19.19■□□□□ 0.66
CLDND1-220ENST00000508902 LTB4R2Q9NPC1 389 aa19.19■□□□□ 0.66
CLDND1-220ENST00000508902 TAB2Q9NYJ8 693 aa19.19■□□□□ 0.66
CLDND1-220ENST00000508902 ZMYM5Q9UJ78 669 aa19.19■□□□□ 0.66
CLDND1-220ENST00000508902 SCML2Q9UQR0 700 aa19.19■□□□□ 0.66
CLDND1-220ENST00000508902 GTPBP10A4D1E9 387 aaKnown RBP19.18■□□□□ 0.66
CLDND1-220ENST00000508902 DPYSL4O14531 572 aa19.18■□□□□ 0.66
CLDND1-220ENST00000508902 TBX18O95935 607 aa19.18■□□□□ 0.66
CLDND1-220ENST00000508902 PNMA6AP0CW24 399 aaPredicted RBP19.18■□□□□ 0.66
CLDND1-220ENST00000508902 VDRP11473 427 aa19.18■□□□□ 0.66
CLDND1-220ENST00000508902 CD19P15391 556 aa19.18■□□□□ 0.66
CLDND1-220ENST00000508902 TCF3P15923 654 aa19.18■□□□□ 0.66
CLDND1-220ENST00000508902 PRKCQQ04759 706 aa19.18■□□□□ 0.66
CLDND1-220ENST00000508902 MTF1Q14872 753 aa19.18■□□□□ 0.66
CLDND1-220ENST00000508902 STX1AQ16623 288 aa19.18■□□□□ 0.66
CLDND1-220ENST00000508902 VWA3BQ502W6 1294 aa19.18■□□□□ 0.66
CLDND1-220ENST00000508902 ARHGAP29Q52LW3 1261 aa19.18■□□□□ 0.66
CLDND1-220ENST00000508902 SGO2Q562F6 1265 aa19.18■□□□□ 0.66
CLDND1-220ENST00000508902 UBA3Q8TBC4 463 aa19.18■□□□□ 0.66
CLDND1-220ENST00000508902 NDRG1Q92597 394 aaKnown RBP19.18■□□□□ 0.66
CLDND1-220ENST00000508902 UBE2TQ9NPD8 197 aaPredicted RBP19.18■□□□□ 0.66
CLDND1-220ENST00000508902 GKN1Q9NS71 199 aa19.18■□□□□ 0.66
CLDND1-220ENST00000508902 FANCLQ9NW38 375 aa19.18■□□□□ 0.66
CLDND1-220ENST00000508902 COMMD8Q9NX08 183 aa19.18■□□□□ 0.66
CLDND1-220ENST00000508902 SMPD4Q9NXE4 827 aa19.18■□□□□ 0.66
CLDND1-220ENST00000508902 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.18■□□□□ 0.66
CLDND1-220ENST00000508902 CPQQ9Y646 472 aa19.18■□□□□ 0.66
CLDND1-220ENST00000508902 WNT6Q9Y6F9 365 aa19.18■□□□□ 0.66
CLDND1-220ENST00000508902 PIAS3Q9Y6X2 628 aa19.18■□□□□ 0.66
CLDND1-220ENST00000508902 KIAA1549LQ6ZVL6 1849 aa19.17■□□□□ 0.66
CLDND1-220ENST00000508902 A0A1W2PQH9 124 aa19.17■□□□□ 0.66
CLDND1-220ENST00000508902 KANSL1LA0AUZ9 987 aa19.17■□□□□ 0.66
CLDND1-220ENST00000508902 LEFTY2O00292 366 aa19.17■□□□□ 0.66
CLDND1-220ENST00000508902 ABL1P00519 1130 aa19.17■□□□□ 0.66
CLDND1-220ENST00000508902 PAEPP09466 180 aa19.17■□□□□ 0.66
CLDND1-220ENST00000508902 ZNF18P17022 549 aa19.17■□□□□ 0.66
CLDND1-220ENST00000508902 YWHAEP62258 255 aaKnown RBP19.17■□□□□ 0.66
CLDND1-220ENST00000508902 CETN1Q12798 172 aa19.17■□□□□ 0.66
CLDND1-220ENST00000508902 KRT31Q15323 416 aa19.17■□□□□ 0.66
CLDND1-220ENST00000508902 EXOC3L4Q17RC7 722 aa19.17■□□□□ 0.66
CLDND1-220ENST00000508902 GBP6Q6ZN66 633 aa19.17■□□□□ 0.66
CLDND1-220ENST00000508902 APTXQ7Z2E3 356 aaKnown RBP19.17■□□□□ 0.66
CLDND1-220ENST00000508902 LINC00597Q9H2U6 94 aa19.17■□□□□ 0.66
CLDND1-220ENST00000508902 EBF3Q9H4W6 596 aa19.17■□□□□ 0.66
CLDND1-220ENST00000508902 ANO10Q9NW15 660 aa19.17■□□□□ 0.66
CLDND1-220ENST00000508902 APEX2Q9UBZ4 518 aa19.17■□□□□ 0.66
CLDND1-220ENST00000508902 MDM4O15151 490 aa19.16■□□□□ 0.66
CLDND1-220ENST00000508902 GREM1O60565 184 aa19.16■□□□□ 0.66
CLDND1-220ENST00000508902 PRKCSHP14314 528 aaPredicted RBP19.16■□□□□ 0.66
CLDND1-220ENST00000508902 PPP3CCP48454 512 aa19.16■□□□□ 0.66
CLDND1-220ENST00000508902 KLK7P49862 253 aa19.16■□□□□ 0.66
CLDND1-220ENST00000508902 GAB4Q2WGN9 574 aa19.16■□□□□ 0.66
CLDND1-220ENST00000508902 SASS6Q6UVJ0 657 aa19.16■□□□□ 0.66
CLDND1-220ENST00000508902 LCLAT1Q6UWP7 414 aa19.16■□□□□ 0.66
CLDND1-220ENST00000508902 CCDC186Q7Z3E2 898 aa19.16■□□□□ 0.66
CLDND1-220ENST00000508902 YAF2Q8IY57 180 aa19.16■□□□□ 0.66
CLDND1-220ENST00000508902 PDZD8Q8NEN9 1154 aa19.16■□□□□ 0.66
CLDND1-220ENST00000508902 SHC3Q92529 594 aa19.16■□□□□ 0.66
CLDND1-220ENST00000508902 EHD2Q9NZN4 543 aa19.16■□□□□ 0.66
CLDND1-220ENST00000508902 NUDT5Q9UKK9 219 aa19.16■□□□□ 0.66
CLDND1-220ENST00000508902 ATG2BQ96BY7 2078 aa19.15■□□□□ 0.66
CLDND1-220ENST00000508902 XPO1O14980 1071 aaKnown RBP19.15■□□□□ 0.66
CLDND1-220ENST00000508902 PFKLP17858 780 aa19.15■□□□□ 0.66
CLDND1-220ENST00000508902 CTHP32929 405 aa19.15■□□□□ 0.66
CLDND1-220ENST00000508902 TUBP50607 506 aa19.15■□□□□ 0.66
CLDND1-220ENST00000508902 BCAT1P54687 386 aa19.15■□□□□ 0.66
CLDND1-220ENST00000508902 BST2Q10589 180 aaKnown RBP19.15■□□□□ 0.66
CLDND1-220ENST00000508902 EML3Q32P44 896 aa19.15■□□□□ 0.66
CLDND1-220ENST00000508902 PMF1Q6P1K2 205 aa19.15■□□□□ 0.66
CLDND1-220ENST00000508902 FAM114A1Q8IWE2 563 aa19.15■□□□□ 0.66
CLDND1-220ENST00000508902 TTC16Q8NEE8 873 aa19.15■□□□□ 0.66
CLDND1-220ENST00000508902 UBXN6Q9BZV1 441 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms