RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 ASS1P00966 412 aaKnown RBP11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 SRGAP2CP0DJJ0 459 aa11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 NCAM1P13591 858 aa11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 MUTP22033 750 aa11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 SLC18A1P54219 525 aa11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 GSTO1P78417 241 aa11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 GALK2Q01415 458 aa11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 CAP1Q01518 475 aa11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 KCNMA1Q12791 1236 aa11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 GRSF1Q12849 480 aaKnown RBP eCLIP11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 STRN3Q13033 797 aa11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 AP3B2Q13367 1082 aa11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 BRDTQ58F21 947 aaPredicted RBP11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 DUPD1Q68J44 220 aa11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 PGM2L1Q6PCE3 622 aa11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 DRICH1Q6PGQ1 229 aaPredicted RBP11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 GATAD2AQ86YP4 633 aa11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 KCT2Q8NC54 265 aa11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 ZNF680Q8NEM1 530 aa11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 OR7D4Q8NG98 312 aa11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 NCOA7Q8NI08 942 aa11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 METTL22Q9BUU2 404 aaPredicted RBP11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 VPS37BQ9H9H4 285 aa11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 RC3H2Q9HBD1 1191 aaKnown RBP11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 INTS7Q9NVH2 962 aaKnown RBP11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 STRIP2Q9ULQ0 834 aa11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 DIMT1Q9UNQ2 313 aaKnown RBP11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 EIF3LQ9Y262 564 aaKnown RBP11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 MAP2P11137 1827 aaKnown RBP11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 FAM196BA6NMK8 535 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 NBPF26B4DH59 902 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 PI4K2BG5E9Z4 385 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 RNF225M0QZC1 329 aaPredicted RBP11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 PSMD11O00231 422 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 VWA5AO00534 786 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 AXIN1O15169 862 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 BMP10O95393 424 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 NTRK1P04629 796 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 KRT13P13646 458 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 CCDC130P13994 396 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 GP5P40197 560 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 COPB1P53618 953 aaKnown RBP11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 DRG2P55039 364 aaKnown RBP11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 CDK16Q00536 496 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 DLG1Q12959 904 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 ATP1A4Q13733 1029 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 ADGRE1Q14246 886 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 TTF1Q15361 905 aaPredicted RBP11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 SPA17Q15506 151 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 TSC22D1Q15714 1073 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 PKN2Q16513 984 aaKnown RBP11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 MAPK6Q16659 721 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 HYIQ5T013 277 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 ATAD3BQ5T9A4 648 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 KLHDC7AQ5VTJ3 777 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 CEP68Q76N32 757 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 RHOUQ7L0Q8 258 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 NIPA1Q7RTP0 329 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 MAGEB6Q8N7X4 407 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 ZNF565Q8N9K5 539 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 CATSPER1Q8NEC5 780 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 DTX3LQ8TDB6 740 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 ACTRT1Q8TDG2 376 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 C10orf82Q8WW14 230 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 JADE3Q92613 823 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 NELL1Q92832 810 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 MCUR1Q96AQ8 359 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 CNDP2Q96KP4 475 aaKnown RBP11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 TGS1Q96RS0 853 aaKnown RBP11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 HINFPQ9BQA5 517 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 TARS2Q9BW92 718 aaKnown RBP11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 ZNF341Q9BYN7 854 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 TTYH3Q9C0H2 523 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 CYP4F11Q9HBI6 524 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 LGR6Q9HBX8 967 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 MRM3Q9HC36 420 aaKnown RBP11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 CPNE5Q9HCH3 593 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 TIGARQ9NQ88 270 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 TMEM9Q9P0T7 183 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 PA2G4Q9UQ80 394 aaKnown RBP11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 DTX4Q9Y2E6 619 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 CLIC4Q9Y696 253 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 MAU2Q9Y6X3 613 aa11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 MED1Q15648 1581 aaPredicted RBP11.21□□□□□ -0.62
PDLIM5-210ENST00000508216 SH3D21A4FU49 640 aa11.2□□□□□ -0.62
PDLIM5-210ENST00000508216 BTN3A1O00481 513 aa11.2□□□□□ -0.62
PDLIM5-210ENST00000508216 ATG13O75143 517 aa11.2□□□□□ -0.62
PDLIM5-210ENST00000508216 CDH16O75309 829 aa11.2□□□□□ -0.62
PDLIM5-210ENST00000508216 GNRH1P01148 92 aa11.2□□□□□ -0.62
PDLIM5-210ENST00000508216 NR3C2P08235 984 aa11.2□□□□□ -0.62
PDLIM5-210ENST00000508216 KRT3P12035 628 aa11.2□□□□□ -0.62
PDLIM5-210ENST00000508216 HTR7P34969 479 aa11.2□□□□□ -0.62
PDLIM5-210ENST00000508216 FDFT1P37268 417 aa11.2□□□□□ -0.62
PDLIM5-210ENST00000508216 ASMTP46597 345 aa11.2□□□□□ -0.62
PDLIM5-210ENST00000508216 CCT4P50991 539 aaKnown RBP11.2□□□□□ -0.62
PDLIM5-210ENST00000508216 GABREP78334 506 aa11.2□□□□□ -0.62
PDLIM5-210ENST00000508216 BAMBIQ13145 260 aa11.2□□□□□ -0.62
PDLIM5-210ENST00000508216 THOC5Q13769 683 aaKnown RBP11.2□□□□□ -0.62
PDLIM5-210ENST00000508216 TWISTNBQ3B726 338 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms