RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 NDST1P52848 882 aa15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 SLC5A3P53794 718 aa15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 MCCD1P59942 119 aaPredicted RBP15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 DLG4P78352 724 aa15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 NUCB2P80303 420 aa15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 MRPS21P82921 87 aaKnown RBP15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 GOLGA8FQ08AF8 430 aa15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 GOLGA8DPQ0D2H9 430 aa15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 INCA1Q0VD86 236 aa15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 RSPO4Q2I0M5 234 aaPredicted RBP15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 KRT39Q6A163 491 aa15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 SCARA5Q6ZMJ2 495 aa15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 ACOT1Q86TX2 421 aa15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 ADGRG2Q8IZP9 1017 aa15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 FUKQ8N0W3 1084 aa15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 HNRNPABQ99729 332 aaKnown RBP15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 NIF3L1Q9GZT8 377 aa15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 NACA2Q9H009 215 aa15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 RNF38Q9H0F5 515 aa15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 TMEM8AQ9HCN3 771 aa15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 TLR8Q9NR97 1041 aaKnown RBP15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 KRT82Q9NSB4 513 aa15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 SH3BP1Q9Y3L3 701 aa15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 CEP250Q9BV73 2442 aa15.28■□□□□ 0.04
HMGCS1-203ENST00000507004 HELZP42694 1942 aaKnown RBP15.27■□□□□ 0.04
HMGCS1-203ENST00000507004 ZNF292O60281 2723 aa15.27■□□□□ 0.04
HMGCS1-203ENST00000507004 CETN3O15182 167 aa15.27■□□□□ 0.04
HMGCS1-203ENST00000507004 ZDHHC11BP0C7U3 371 aa15.27■□□□□ 0.04
HMGCS1-203ENST00000507004 TGM1P22735 817 aa15.27■□□□□ 0.04
HMGCS1-203ENST00000507004 ASPAP45381 313 aa15.27■□□□□ 0.04
HMGCS1-203ENST00000507004 PSEN1P49768 467 aa15.27■□□□□ 0.04
HMGCS1-203ENST00000507004 CACNA2D1P54289 1103 aa15.27■□□□□ 0.04
HMGCS1-203ENST00000507004 GAD2Q05329 585 aa15.27■□□□□ 0.04
HMGCS1-203ENST00000507004 DMWDQ09019 674 aa15.27■□□□□ 0.04
HMGCS1-203ENST00000507004 IFRD2Q12894 506 aaPredicted RBP15.27■□□□□ 0.04
HMGCS1-203ENST00000507004 DMC1Q14565 340 aa15.27■□□□□ 0.04
HMGCS1-203ENST00000507004 DHCR24Q15392 516 aa15.27■□□□□ 0.04
HMGCS1-203ENST00000507004 PAQR9Q6ZVX9 377 aa15.27■□□□□ 0.04
HMGCS1-203ENST00000507004 FILIP1Q7Z7B0 1213 aa15.27■□□□□ 0.04
HMGCS1-203ENST00000507004 TADA2BQ86TJ2 420 aa15.27■□□□□ 0.04
HMGCS1-203ENST00000507004 RPLP0P6Q8NHW5 317 aa15.27■□□□□ 0.04
HMGCS1-203ENST00000507004 KCNV2Q8TDN2 545 aa15.27■□□□□ 0.04
HMGCS1-203ENST00000507004 DDX1Q92499 740 aaKnown RBP15.27■□□□□ 0.04
HMGCS1-203ENST00000507004 GSDMAQ96QA5 445 aa15.27■□□□□ 0.04
HMGCS1-203ENST00000507004 KCNK16Q96T55 309 aa15.27■□□□□ 0.04
HMGCS1-203ENST00000507004 TSG101Q99816 390 aa15.27■□□□□ 0.04
HMGCS1-203ENST00000507004 LINC00597Q9H2U6 94 aa15.27■□□□□ 0.04
HMGCS1-203ENST00000507004 SEMA4GQ9NTN9 838 aa15.27■□□□□ 0.04
HMGCS1-203ENST00000507004 CFAP97Q9P2B7 532 aa15.27■□□□□ 0.04
HMGCS1-203ENST00000507004 PCDHA5Q9Y5H7 936 aa15.27■□□□□ 0.04
HMGCS1-203ENST00000507004 VPS13AQ96RL7 3174 aa15.27■□□□□ 0.03
HMGCS1-203ENST00000507004 RHOBTB1O94844 696 aa15.26■□□□□ 0.03
HMGCS1-203ENST00000507004 SMC2O95347 1197 aa15.26■□□□□ 0.03
HMGCS1-203ENST00000507004 APODP05090 189 aa15.26■□□□□ 0.03
HMGCS1-203ENST00000507004 CYP17A1P05093 508 aa15.26■□□□□ 0.03
HMGCS1-203ENST00000507004 EPB41P11171 864 aaKnown RBP15.26■□□□□ 0.03
HMGCS1-203ENST00000507004 PPP1R2P41236 205 aa15.26■□□□□ 0.03
HMGCS1-203ENST00000507004 RAP1GAPP47736 663 aa15.26■□□□□ 0.03
HMGCS1-203ENST00000507004 SPEM2Q0P670 501 aa15.26■□□□□ 0.03
HMGCS1-203ENST00000507004 ELF2Q15723 593 aa15.26■□□□□ 0.03
HMGCS1-203ENST00000507004 COBLL1Q53SF7 1204 aa15.26■□□□□ 0.03
HMGCS1-203ENST00000507004 BTBD8Q5XKL5 378 aa15.26■□□□□ 0.03
HMGCS1-203ENST00000507004 KLHDC10Q6PID8 442 aa15.26■□□□□ 0.03
HMGCS1-203ENST00000507004 FAM160A2Q8N612 972 aaPredicted RBP15.26■□□□□ 0.03
HMGCS1-203ENST00000507004 SLC2A14Q8TDB8 520 aa15.26■□□□□ 0.03
HMGCS1-203ENST00000507004 ZC3H10Q96K80 434 aaKnown RBP15.26■□□□□ 0.03
HMGCS1-203ENST00000507004 CDK5RAP1Q96SZ6 601 aaKnown RBP15.26■□□□□ 0.03
HMGCS1-203ENST00000507004 PNKPQ96T60 521 aa15.26■□□□□ 0.03
HMGCS1-203ENST00000507004 SDCBP2Q9H190 292 aa15.26■□□□□ 0.03
HMGCS1-203ENST00000507004 FBRSL1Q9HCM7 1045 aaKnown RBP15.26■□□□□ 0.03
HMGCS1-203ENST00000507004 TMEM30AQ9NV96 361 aa15.26■□□□□ 0.03
HMGCS1-203ENST00000507004 SMPD4Q9NXE4 827 aa15.26■□□□□ 0.03
HMGCS1-203ENST00000507004 DMDP11532 3685 aa15.26■□□□□ 0.03
HMGCS1-203ENST00000507004 A0A0A0MRY4 1105 aa15.25■□□□□ 0.03
HMGCS1-203ENST00000507004 COCHO43405 550 aa15.25■□□□□ 0.03
HMGCS1-203ENST00000507004 ALDH1A2O94788 518 aa15.25■□□□□ 0.03
HMGCS1-203ENST00000507004 EPN2O95208 641 aa15.25■□□□□ 0.03
HMGCS1-203ENST00000507004 PRR29P0C7W0 189 aa15.25■□□□□ 0.03
HMGCS1-203ENST00000507004 ADH5P11766 374 aa15.25■□□□□ 0.03
HMGCS1-203ENST00000507004 OPRD1P41143 372 aa15.25■□□□□ 0.03
HMGCS1-203ENST00000507004 GRIA2P42262 883 aa15.25■□□□□ 0.03
HMGCS1-203ENST00000507004 GCLMP48507 274 aa15.25■□□□□ 0.03
HMGCS1-203ENST00000507004 DGKEP52429 567 aa15.25■□□□□ 0.03
HMGCS1-203ENST00000507004 ZXDBP98169 803 aa15.25■□□□□ 0.03
HMGCS1-203ENST00000507004 LPAL2Q16609 132 aa15.25■□□□□ 0.03
HMGCS1-203ENST00000507004 ZCWPW2Q504Y3 356 aa15.25■□□□□ 0.03
HMGCS1-203ENST00000507004 C1orf220Q5T0J3 134 aa15.25■□□□□ 0.03
HMGCS1-203ENST00000507004 PKN3Q6P5Z2 889 aa15.25■□□□□ 0.03
HMGCS1-203ENST00000507004 PRR23CQ6ZRP0 262 aa15.25■□□□□ 0.03
HMGCS1-203ENST00000507004 TRMT11Q7Z4G4 463 aaKnown RBP15.25■□□□□ 0.03
HMGCS1-203ENST00000507004 ZNF276Q8N554 614 aa15.25■□□□□ 0.03
HMGCS1-203ENST00000507004 TSTD1Q8NFU3 115 aa15.25■□□□□ 0.03
HMGCS1-203ENST00000507004 USP33Q8TEY7 942 aa15.25■□□□□ 0.03
HMGCS1-203ENST00000507004 CYFIP2Q96F07 1278 aa15.25■□□□□ 0.03
HMGCS1-203ENST00000507004 SMOQ99835 787 aa15.25■□□□□ 0.03
HMGCS1-203ENST00000507004 PARD6AQ9NPB6 346 aa15.25■□□□□ 0.03
HMGCS1-203ENST00000507004 CYLDQ9NQC7 956 aa15.25■□□□□ 0.03
HMGCS1-203ENST00000507004 CHORDC1Q9UHD1 332 aaPredicted RBP15.25■□□□□ 0.03
HMGCS1-203ENST00000507004 LSM7Q9UK45 103 aaKnown RBP15.25■□□□□ 0.03
HMGCS1-203ENST00000507004 SCML2Q9UQR0 700 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms