RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 ZFRQ96KR1 1074 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 HNRNPABQ99729 332 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 MED10Q9BTT4 135 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 EPC1Q9H2F5 836 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 LINC00597Q9H2U6 94 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 KDM4CQ9H3R0 1056 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 FBRSL1Q9HCM7 1045 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 C2orf42Q9NWW7 574 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 COMMD8Q9NX08 183 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 DUS2Q9NX74 493 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 COQ4Q9Y3A0 265 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 CPQQ9Y646 472 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 WNT6Q9Y6F9 365 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 CEP250Q9BV73 2442 aa9.62□□□□□ -0.87
PDLIM5-209ENST00000506632 TRIM49BA6NDI0 452 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 HHLA1C9JL84 531 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 STX10O60499 249 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 CLSTN1O94985 981 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 CD44P16070 742 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 BMP6P22004 513 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 IFNAR2P48551 515 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 TUBP50607 506 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 GALK1P51570 392 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 NRLP54845 237 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 FKBP3Q00688 224 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 AMPD2Q01433 879 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 PPP2R5DQ14738 602 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 CBWD6Q4V339 395 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 CBWD3Q5JTY5 395 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 CBWD5Q5RIA9 395 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 NAIF1Q69YI7 327 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 PKN3Q6P5Z2 889 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 FOXR2Q6PJQ5 311 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 CLEC20AQ6ZU45 233 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 FBXL13Q8NEE6 735 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 ATRIPQ8WXE1 791 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 EZH1Q92800 747 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 SLC35C1Q96A29 364 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 DUSP9Q99956 384 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 NT5C1AQ9BXI3 368 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 FAM124BQ9H5Z6 455 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 MMRN2Q9H8L6 949 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 PNPLA8Q9NP80 782 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 FAM49BQ9NUQ9 324 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 RAB20Q9NX57 234 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 HOOK1Q9UJC3 728 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 MAN1B1Q9UKM7 699 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 WDR87Q6ZQQ6 2873 aa9.61□□□□□ -0.87
PDLIM5-209ENST00000506632 CHURC1-FNTBB4DL54 471 aa9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 COCHO43405 550 aa9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 GADD45BO75293 160 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 NFATC1O95644 943 aa9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 EGFP01133 1207 aa9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 CYP17A1P05093 508 aa9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 FAM200BP0CF97 657 aa9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 DRD1P21728 446 aa9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 OPRD1P41143 372 aa9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 PGFP49763 221 aa9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 MAP3K7CLP57077 242 aa9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 DMWDQ09019 674 aa9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 GRSF1Q12849 480 aaKnown RBP eCLIP9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 IFRD2Q12894 506 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 GPRIN1Q7Z2K8 1008 aa9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 DDX42Q86XP3 938 aaKnown RBP eCLIP9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 ADGRG2Q8IZP9 1017 aa9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 CCDC150Q8NCX0 1101 aa9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 RUBCNQ92622 972 aa9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 CD101Q93033 1021 aa9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 CYFIP2Q96F07 1278 aa9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 DHTKD1Q96HY7 919 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 TSG101Q99816 390 aa9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 P2RY13Q9BPV8 354 aa9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 CCSER2Q9H7U1 834 aa9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 GMIPQ9P107 970 aa9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 CHORDC1Q9UHD1 332 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 KIAA1549LQ6ZVL6 1849 aa9.6□□□□□ -0.87
PDLIM5-209ENST00000506632 MYO16Q9Y6X6 1858 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 MYH10P35580 1976 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 CFAP54Q96N23 3096 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 E2F8A0AVK6 867 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 PPP1R3GB7ZBB8 358 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 SLC9A3R1O14745 358 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 PSMA7O14818 248 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 PMM2O15305 246 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 ABL1P00519 1130 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 MBL2P11226 248 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 CD58P19256 250 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 ADORA2BP29275 332 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 HOXC13P31276 330 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 PPP1R2P41236 205 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 RAD23BP54727 409 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 NR1H3Q13133 447 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 MORC3Q14149 939 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 FBXO43Q4G163 708 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 HECTD3Q5T447 861 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 PPP1R26Q5T8A7 1209 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 TTI2Q6NXR4 508 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 FILIP1Q7Z7B0 1213 aa9.59□□□□□ -0.87
PDLIM5-209ENST00000506632 TTC39CQ8N584 583 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms