RNA–Protein interactions for RNA: ENST00000505591.1

COL25A1-206, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 3

Gene COL25A1, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-206ENST00000505591 HS2ST1Q7LGA3 356 aa13.31□□□□□ -0.28
COL25A1-206ENST00000505591 CCDC65Q8IXS2 484 aa13.31□□□□□ -0.28
COL25A1-206ENST00000505591 TMEFF1Q8IYR6 380 aa13.31□□□□□ -0.28
COL25A1-206ENST00000505591 PGBD3Q8N328 593 aa13.31□□□□□ -0.28
COL25A1-206ENST00000505591 HDDC3Q8N4P3 179 aa13.31□□□□□ -0.28
COL25A1-206ENST00000505591 OR5B17Q8NGF7 314 aa13.31□□□□□ -0.28
COL25A1-206ENST00000505591 RLN3Q8WXF3 142 aa13.31□□□□□ -0.28
COL25A1-206ENST00000505591 OVCA2Q8WZ82 227 aa13.31□□□□□ -0.28
COL25A1-206ENST00000505591 FAM84AQ96KN4 292 aa13.31□□□□□ -0.28
COL25A1-206ENST00000505591 SMPD4Q9NXE4 827 aa13.31□□□□□ -0.28
COL25A1-206ENST00000505591 PILRBQ9UKJ0 227 aa13.31□□□□□ -0.28
COL25A1-206ENST00000505591 PI4KAP42356 2102 aa13.3□□□□□ -0.28
COL25A1-206ENST00000505591 TCRBV21S2A2A0A5A6 115 aa13.3□□□□□ -0.28
COL25A1-206ENST00000505591 RTN3O95197 1032 aaPredicted RBP13.3□□□□□ -0.28
COL25A1-206ENST00000505591 PDCP20941 246 aa13.3□□□□□ -0.28
COL25A1-206ENST00000505591 PTGER3P43115 390 aa13.3□□□□□ -0.28
COL25A1-206ENST00000505591 GFPT1Q06210 699 aaPredicted RBP13.3□□□□□ -0.28
COL25A1-206ENST00000505591 HNRNPDQ14103 355 aaKnown RBP13.3□□□□□ -0.28
COL25A1-206ENST00000505591 DUOXA1Q1HG43 343 aa13.3□□□□□ -0.28
COL25A1-206ENST00000505591 ARMCX6Q7L4S7 300 aa13.3□□□□□ -0.28
COL25A1-206ENST00000505591 OR6B3Q8NGW1 331 aa13.3□□□□□ -0.28
COL25A1-206ENST00000505591 HMGB4Q8WW32 186 aa13.3□□□□□ -0.28
COL25A1-206ENST00000505591 ZCCHC14Q8WYQ9 949 aaKnown RBP13.3□□□□□ -0.28
COL25A1-206ENST00000505591 DUSP9Q99956 384 aaKnown RBP13.3□□□□□ -0.28
COL25A1-206ENST00000505591 LRRC27Q9C0I9 530 aa13.3□□□□□ -0.28
COL25A1-206ENST00000505591 TMEM74BQ9NUR3 256 aa13.3□□□□□ -0.28
COL25A1-206ENST00000505591 MBD1Q9UIS9 605 aaPredicted RBP13.3□□□□□ -0.28
COL25A1-206ENST00000505591 SLC6A14Q9UN76 642 aa13.3□□□□□ -0.28
COL25A1-206ENST00000505591 MSRB2Q9Y3D2 182 aa13.3□□□□□ -0.28
COL25A1-206ENST00000505591 CLIC4Q9Y696 253 aa13.3□□□□□ -0.28
COL25A1-206ENST00000505591 PTPRJQ12913 1337 aa13.3□□□□□ -0.28
COL25A1-206ENST00000505591 LOC400499M0QZD8 3231 aa13.3□□□□□ -0.28
COL25A1-206ENST00000505591 VPS37CA5D8V6 355 aaPredicted RBP13.29□□□□□ -0.28
COL25A1-206ENST00000505591 TBC1D3BA6NDS4 549 aa13.29□□□□□ -0.28
COL25A1-206ENST00000505591 ANTXRLA6NF34 631 aa13.29□□□□□ -0.28
COL25A1-206ENST00000505591 SRRM3A6NNA2 597 aaPredicted RBP13.29□□□□□ -0.28
COL25A1-206ENST00000505591 ZBTB24O43167 697 aaPredicted RBP13.29□□□□□ -0.28
COL25A1-206ENST00000505591 ADAM23O75077 832 aa13.29□□□□□ -0.28
COL25A1-206ENST00000505591 TOP3BO95985 862 aaKnown RBP13.29□□□□□ -0.28
COL25A1-206ENST00000505591 CFIP05156 583 aa13.29□□□□□ -0.28
COL25A1-206ENST00000505591 CHRM1P11229 460 aaPredicted RBP13.29□□□□□ -0.28
COL25A1-206ENST00000505591 PTPN1P18031 435 aaKnown RBP13.29□□□□□ -0.28
COL25A1-206ENST00000505591 YWHAQP27348 245 aa13.29□□□□□ -0.28
COL25A1-206ENST00000505591 TNNC1P63316 161 aa13.29□□□□□ -0.28
COL25A1-206ENST00000505591 KDSRQ06136 332 aa13.29□□□□□ -0.28
COL25A1-206ENST00000505591 SEMA3BQ13214 749 aa13.29□□□□□ -0.28
COL25A1-206ENST00000505591 LY6G5CQ5SRR4 150 aa13.29□□□□□ -0.28
COL25A1-206ENST00000505591 TRAPPC11Q7Z392 1133 aa13.29□□□□□ -0.28
COL25A1-206ENST00000505591 PIP4P1Q86T03 277 aa13.29□□□□□ -0.28
COL25A1-206ENST00000505591 C12orf40Q86WS4 652 aa13.29□□□□□ -0.28
COL25A1-206ENST00000505591 CBWD2Q8IUF1 395 aa13.29□□□□□ -0.28
COL25A1-206ENST00000505591 NUP93Q8N1F7 819 aa13.29□□□□□ -0.28
COL25A1-206ENST00000505591 CLIC6Q96NY7 704 aa13.29□□□□□ -0.28
COL25A1-206ENST00000505591 MRPL45Q9BRJ2 306 aaKnown RBP13.29□□□□□ -0.28
COL25A1-206ENST00000505591 FGFBP2Q9BYJ0 223 aa13.29□□□□□ -0.28
COL25A1-206ENST00000505591 UPF2Q9HAU5 1272 aaKnown RBP13.29□□□□□ -0.28
COL25A1-206ENST00000505591 HSPBP1Q9NZL4 362 aa13.29□□□□□ -0.28
COL25A1-206ENST00000505591 DEC1Q9P2X7 70 aa13.29□□□□□ -0.28
COL25A1-206ENST00000505591 SH3BP1Q9Y3L3 701 aa13.29□□□□□ -0.28
COL25A1-206ENST00000505591 MORC2Q9Y6X9 1032 aaPredicted RBP13.29□□□□□ -0.28
COL25A1-206ENST00000505591 CELSR3Q9NYQ7 3312 aa13.29□□□□□ -0.28
COL25A1-206ENST00000505591 PTPRDP23468 1912 aa13.29□□□□□ -0.28
COL25A1-206ENST00000505591 HOXC11O43248 304 aaPredicted RBP13.28□□□□□ -0.28
COL25A1-206ENST00000505591 HYAL3O43820 417 aaPredicted RBP13.28□□□□□ -0.28
COL25A1-206ENST00000505591 OPHN1O60890 802 aa13.28□□□□□ -0.28
COL25A1-206ENST00000505591 ZNF217O75362 1048 aa13.28□□□□□ -0.28
COL25A1-206ENST00000505591 CD2BP2O95400 341 aaKnown RBP13.28□□□□□ -0.28
COL25A1-206ENST00000505591 STAU1O95793 577 aaKnown RBP13.28□□□□□ -0.28
COL25A1-206ENST00000505591 SERPINF2P08697 491 aa13.28□□□□□ -0.28
COL25A1-206ENST00000505591 TNNI1P19237 187 aa13.28□□□□□ -0.28
COL25A1-206ENST00000505591 ITPKAP23677 461 aa13.28□□□□□ -0.28
COL25A1-206ENST00000505591 TUBP50607 506 aa13.28□□□□□ -0.28
COL25A1-206ENST00000505591 SIM1P81133 766 aaPredicted RBP13.28□□□□□ -0.28
COL25A1-206ENST00000505591 RPL6Q02878 288 aaKnown RBP13.28□□□□□ -0.28
COL25A1-206ENST00000505591 MESP2Q0VG99 397 aa13.28□□□□□ -0.28
COL25A1-206ENST00000505591 SNRNP35Q16560 246 aaKnown RBP13.28□□□□□ -0.28
COL25A1-206ENST00000505591 WDR72Q3MJ13 1102 aa13.28□□□□□ -0.28
COL25A1-206ENST00000505591 HECTD3Q5T447 861 aa13.28□□□□□ -0.28
COL25A1-206ENST00000505591 EMC10Q5UCC4 262 aa13.28□□□□□ -0.28
COL25A1-206ENST00000505591 SNX30Q5VWJ9 437 aa13.28□□□□□ -0.28
COL25A1-206ENST00000505591 KIAA1211LQ6NV74 962 aa13.28□□□□□ -0.28
COL25A1-206ENST00000505591 SFTPA1Q8IWL2 248 aa13.28□□□□□ -0.28
COL25A1-206ENST00000505591 PHTF2Q8N3S3 785 aa13.28□□□□□ -0.28
COL25A1-206ENST00000505591 ZNF513Q8N8E2 541 aaPredicted RBP13.28□□□□□ -0.28
COL25A1-206ENST00000505591 FBXO32Q969P5 355 aa13.28□□□□□ -0.28
COL25A1-206ENST00000505591 PLXND1Q9Y4D7 1925 aa13.28□□□□□ -0.28
COL25A1-206ENST00000505591 ATP8B3O60423 1300 aa13.28□□□□□ -0.28
COL25A1-206ENST00000505591 A8MXQ7 604 aa13.27□□□□□ -0.29
COL25A1-206ENST00000505591 SCAMP3O14828 347 aaKnown RBP13.27□□□□□ -0.29
COL25A1-206ENST00000505591 EIF3DO15371 548 aaKnown RBP eCLIP13.27□□□□□ -0.29
COL25A1-206ENST00000505591 COCHO43405 550 aa13.27□□□□□ -0.29
COL25A1-206ENST00000505591 SYPP08247 313 aa13.27□□□□□ -0.29
COL25A1-206ENST00000505591 DLATP10515 647 aaKnown RBP13.27□□□□□ -0.29
COL25A1-206ENST00000505591 SNRPFP62306 86 aaKnown RBP13.27□□□□□ -0.29
COL25A1-206ENST00000505591 IFRD2Q12894 506 aaPredicted RBP13.27□□□□□ -0.29
COL25A1-206ENST00000505591 TRPC3Q13507 836 aa13.27□□□□□ -0.29
COL25A1-206ENST00000505591 COL9A2Q14055 689 aaPredicted RBP13.27□□□□□ -0.29
COL25A1-206ENST00000505591 ZNF423Q2M1K9 1284 aa13.27□□□□□ -0.29
COL25A1-206ENST00000505591 SDE2Q6IQ49 451 aa13.27□□□□□ -0.29
COL25A1-206ENST00000505591 ETFBKMTQ8IXQ9 262 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms