RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 GOLGA8DPQ0D2H9 430 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 SOWAHAQ2M3V2 549 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 PLEKHG6Q3KR16 790 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 L1TD1Q5T7N2 865 aaKnown RBP10.55□□□□□ -0.72
NEDD9-210ENST00000505589 CCNI2Q6ZMN8 369 aaPredicted RBP10.55□□□□□ -0.72
NEDD9-210ENST00000505589 SV2BQ7L1I2 683 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 HS2ST1Q7LGA3 356 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 PDZD3Q86UT5 571 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 NUP93Q8N1F7 819 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 GALNT15Q8N3T1 639 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 SCFD1Q8WVM8 642 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 MMS19Q96T76 1030 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 CDC6Q99741 560 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 ELOVL4Q9GZR5 314 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 RNF38Q9H0F5 515 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 SNX25Q9H3E2 840 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 SCUBE2Q9NQ36 999 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.55□□□□□ -0.72
NEDD9-210ENST00000505589 CFAP97Q9P2B7 532 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 WDR35Q9P2L0 1181 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 DKK4Q9UBT3 224 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 STK17AQ9UEE5 414 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 ASCC3Q8N3C0 2202 aaKnown RBP10.54□□□□□ -0.72
NEDD9-210ENST00000505589 E9PAM4 449 aa10.54□□□□□ -0.72
NEDD9-210ENST00000505589 HOXC11O43248 304 aaPredicted RBP10.54□□□□□ -0.72
NEDD9-210ENST00000505589 TACC1O75410 805 aa10.54□□□□□ -0.72
NEDD9-210ENST00000505589 GCNT3O95395 438 aa10.54□□□□□ -0.72
NEDD9-210ENST00000505589 OAS1P00973 400 aaKnown RBP10.54□□□□□ -0.72
NEDD9-210ENST00000505589 PDGFRBP09619 1106 aa10.54□□□□□ -0.72
NEDD9-210ENST00000505589 CD59P13987 128 aa10.54□□□□□ -0.72
NEDD9-210ENST00000505589 WARSP23381 471 aaKnown RBP10.54□□□□□ -0.72
NEDD9-210ENST00000505589 OXTRP30559 389 aa10.54□□□□□ -0.72
NEDD9-210ENST00000505589 TUBP50607 506 aa10.54□□□□□ -0.72
NEDD9-210ENST00000505589 TAF10Q12962 218 aa10.54□□□□□ -0.72
NEDD9-210ENST00000505589 ANO4Q32M45 955 aa10.54□□□□□ -0.72
NEDD9-210ENST00000505589 LY6G5CQ5SRR4 150 aa10.54□□□□□ -0.72
NEDD9-210ENST00000505589 HECTD3Q5T447 861 aa10.54□□□□□ -0.72
NEDD9-210ENST00000505589 EMC10Q5UCC4 262 aa10.54□□□□□ -0.72
NEDD9-210ENST00000505589 GLRX5Q86SX6 157 aa10.54□□□□□ -0.72
NEDD9-210ENST00000505589 METTL3Q86U44 580 aaKnown RBP10.54□□□□□ -0.72
NEDD9-210ENST00000505589 CHPFQ8IZ52 775 aa10.54□□□□□ -0.72
NEDD9-210ENST00000505589 GPD1LQ8N335 351 aa10.54□□□□□ -0.72
NEDD9-210ENST00000505589 TRIML1Q8N9V2 468 aa10.54□□□□□ -0.72
NEDD9-210ENST00000505589 CEP295Q9C0D2 2601 aa10.54□□□□□ -0.72
NEDD9-210ENST00000505589 LRRC27Q9C0I9 530 aa10.54□□□□□ -0.72
NEDD9-210ENST00000505589 NACA2Q9H009 215 aa10.54□□□□□ -0.72
NEDD9-210ENST00000505589 SPHK2Q9NRA0 654 aa10.54□□□□□ -0.72
NEDD9-210ENST00000505589 OLFML3Q9NRN5 406 aa10.54□□□□□ -0.72
NEDD9-210ENST00000505589 BLOC1S4Q9NUP1 217 aa10.54□□□□□ -0.72
NEDD9-210ENST00000505589 INTS13Q9NVM9 706 aa10.54□□□□□ -0.72
NEDD9-210ENST00000505589 ATP8B3O60423 1300 aa10.54□□□□□ -0.72
NEDD9-210ENST00000505589 PI4KAP42356 2102 aa10.54□□□□□ -0.72
NEDD9-210ENST00000505589 SPEGQ15772 3267 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 A0A1B0GTW7 788 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 SH3BP5O60239 455 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 ADAM23O75077 832 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 CER1O95813 267 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 CAPNS1P04632 268 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 FTH1P19P0C7X4 201 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 ZNF883P0CG24 379 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 LMO2P25791 158 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 ZXDBP98169 803 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 GAB4Q2WGN9 574 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 C10orf76Q5T2E6 689 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 SNX30Q5VWJ9 437 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 RRAGBQ5VZM2 374 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 TOGARAM2Q6ZUX3 1019 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 LIMS2Q7Z4I7 341 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 OSTM1Q86WC4 334 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 NAXDQ8IW45 347 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 TERB1Q8NA31 727 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 GLIS3Q8NEA6 775 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 CADM4Q8NFZ8 388 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 OR6B3Q8NGW1 331 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 FBXO32Q969P5 355 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 MYLPFQ96A32 169 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 PCED1BQ96HM7 432 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 STRA6Q9BX79 667 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 SMPD4Q9NXE4 827 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 CALCOCO1Q9P1Z2 691 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 LAMA5O15230 3695 aa10.53□□□□□ -0.72
NEDD9-210ENST00000505589 IGHV1OR15-9A0A0B4J2B8 117 aa10.52□□□□□ -0.73
NEDD9-210ENST00000505589 F8VP50 259 aa10.52□□□□□ -0.73
NEDD9-210ENST00000505589 TULP3O75386 442 aa10.52□□□□□ -0.73
NEDD9-210ENST00000505589 PPP1R37O75864 691 aa10.52□□□□□ -0.73
NEDD9-210ENST00000505589 HNRNPLP14866 589 aaKnown RBP eCLIP10.52□□□□□ -0.73
NEDD9-210ENST00000505589 PTPN1P18031 435 aaKnown RBP10.52□□□□□ -0.73
NEDD9-210ENST00000505589 GABRG2P18507 467 aa10.52□□□□□ -0.73
NEDD9-210ENST00000505589 CD6P30203 668 aa10.52□□□□□ -0.73
NEDD9-210ENST00000505589 TNNC1P63316 161 aa10.52□□□□□ -0.73
NEDD9-210ENST00000505589 STARD3Q14849 445 aa10.52□□□□□ -0.73
NEDD9-210ENST00000505589 SOWAHCQ53LP3 525 aaPredicted RBP10.52□□□□□ -0.73
NEDD9-210ENST00000505589 GRAMD4Q6IC98 578 aa10.52□□□□□ -0.73
NEDD9-210ENST00000505589 C19orf48Q6RUI8 117 aa10.52□□□□□ -0.73
NEDD9-210ENST00000505589 DYMQ7RTS9 669 aa10.52□□□□□ -0.73
NEDD9-210ENST00000505589 BRAPQ7Z569 592 aa10.52□□□□□ -0.73
NEDD9-210ENST00000505589 WDR49Q8IV35 697 aa10.52□□□□□ -0.73
NEDD9-210ENST00000505589 ETFBKMTQ8IXQ9 262 aa10.52□□□□□ -0.73
NEDD9-210ENST00000505589 FRMD1Q8N878 549 aa10.52□□□□□ -0.73
NEDD9-210ENST00000505589 NAT16Q8N8M0 369 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms