RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 E7EVH7 732 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 LILRA4P59901 499 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 AUHQ13825 339 aaKnown RBP11.83□□□□□ -0.52
NFKB1-205ENST00000505458 CCDC14Q49A88 953 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 B3GALNT2Q8NCR0 500 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 FAM172AQ8WUF8 416 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 HSPH1Q92598 858 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 RTP4Q96DX8 246 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 DDX23Q9BUQ8 820 aaKnown RBP11.83□□□□□ -0.52
NFKB1-205ENST00000505458 DUSP16Q9BY84 665 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 SEZ6LQ9BYH1 1024 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 FAM105AQ9NUU6 356 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.83□□□□□ -0.52
NFKB1-205ENST00000505458 SLC24A2Q9UI40 661 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 GMNCA6NCL1 334 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 ALOX15BO15296 676 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 THP07101 528 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 AKAP5P24588 427 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 PCSK1P29120 753 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 TRIP13Q15645 432 aaPredicted RBP11.83□□□□□ -0.52
NFKB1-205ENST00000505458 HIF1AQ16665 826 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 GLRA4Q5JXX5 417 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 ZMYND15Q9H091 742 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 FAM49BQ9NUQ9 324 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 TJP2Q9UDY2 1190 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 PCSK1NQ9UHG2 260 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 SF3B1O75533 1304 aaKnown RBP eCLIP11.83□□□□□ -0.52
NFKB1-205ENST00000505458 PAPSS1O43252 624 aaPredicted RBP11.83□□□□□ -0.52
NFKB1-205ENST00000505458 SHBGP04278 402 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 HOXD10P28358 340 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 DPYSL3Q14195 570 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 DPYSL2Q16555 572 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 NBPF20Q3BBV1 942 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 SLC9A4Q6AI14 798 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 NLRP14Q86W24 1093 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 ATP11CQ8NB49 1132 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 NGRNQ9NPE2 291 aaKnown RBP11.83□□□□□ -0.52
NFKB1-205ENST00000505458 FARP1Q9Y4F1 1045 aaPredicted RBP11.83□□□□□ -0.52
NFKB1-205ENST00000505458 HES2Q9Y543 173 aa11.83□□□□□ -0.52
NFKB1-205ENST00000505458 GOLGB1Q14789 3259 aaKnown RBP11.82□□□□□ -0.52
NFKB1-205ENST00000505458 TLDC2A0PJX2 215 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 GABRDO14764 452 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 TRAPPC3O43617 180 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 RBP3P10745 1247 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 CHKAP35790 457 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 PSMC4P43686 418 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 SMTNL2Q2TAL5 461 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 ERMARDQ5T6L9 678 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 TXNRD3NBQ6F5E7 133 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 PDIK1LQ8N165 341 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 TSPYL2Q9H2G4 693 aaPredicted RBP11.82□□□□□ -0.52
NFKB1-205ENST00000505458 BCLAF3A2AJT9 711 aaKnown RBP11.82□□□□□ -0.52
NFKB1-205ENST00000505458 HACD1B0YJ81 288 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 CYB561D2O14569 222 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 PPEF2O14830 753 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 CHADO15335 359 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 ACSL3O95573 720 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 NPR3P17342 541 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 VPS41P49754 854 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 BCAR1P56945 870 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 PTK7Q13308 1070 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 HIC1Q14526 733 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 KLHL38Q2WGJ6 581 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 C12orf29Q8N999 325 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 PRCCQ92733 491 aaPredicted RBP11.82□□□□□ -0.52
NFKB1-205ENST00000505458 SLC9A7Q96T83 725 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 C11orf84Q9BUA3 381 aaPredicted RBP11.82□□□□□ -0.52
NFKB1-205ENST00000505458 SAYSD1Q9NPB0 183 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 CDH9Q9ULB4 789 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 ST3GAL5Q9UNP4 418 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 RAD54BQ9Y620 910 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 GSTA2P09210 222 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 MATKP42679 507 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 RGS7P49802 495 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 SLC18A1P54219 525 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 MGAT3Q09327 533 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 LENG1Q96BZ8 264 aaPredicted RBP11.82□□□□□ -0.52
NFKB1-205ENST00000505458 XPO6Q96QU8 1125 aaKnown RBP11.82□□□□□ -0.52
NFKB1-205ENST00000505458 ADAM7Q9H2U9 754 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 LRRC4Q9HBW1 653 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 PCDH18Q9HCL0 1135 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 XPNPEP3Q9NQH7 507 aa11.82□□□□□ -0.52
NFKB1-205ENST00000505458 IFNB1P01574 187 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 CTCFP49711 727 aaPredicted RBP11.81□□□□□ -0.52
NFKB1-205ENST00000505458 GUCY1A3Q02108 690 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 RNASELQ05823 741 aaKnown RBP11.81□□□□□ -0.52
NFKB1-205ENST00000505458 NOGQ13253 232 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 LLGL1Q15334 1064 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 MAPRE1Q15691 268 aaKnown RBP11.81□□□□□ -0.52
NFKB1-205ENST00000505458 FAM26DQ5JW98 314 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 DARS2Q6PI48 645 aaKnown RBP11.81□□□□□ -0.52
NFKB1-205ENST00000505458 TADA2BQ86TJ2 420 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 METTL23Q86XA0 190 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 SIX6OS1Q8N1H7 587 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 INTS9Q9NV88 658 aaKnown RBP11.81□□□□□ -0.52
NFKB1-205ENST00000505458 E7ESA3 106 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 GNRH1P01148 92 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 FAM200BP0CF97 657 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 ODC1P11926 461 aa11.81□□□□□ -0.52
NFKB1-205ENST00000505458 PTPN1P18031 435 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms