RNA–Protein interactions for RNA: ENST00000505377.1

COL25A1-205, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 448 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-205ENST00000505377 MDH1BQ5I0G3 518 aa12.82□□□□□ -0.36
COL25A1-205ENST00000505377 C4orf50Q6ZRC1 276 aa12.82□□□□□ -0.36
COL25A1-205ENST00000505377 PDZD3Q86UT5 571 aa12.82□□□□□ -0.36
COL25A1-205ENST00000505377 CACTINQ8WUQ7 758 aaKnown RBP12.82□□□□□ -0.36
COL25A1-205ENST00000505377 PCED1BQ96HM7 432 aa12.82□□□□□ -0.36
COL25A1-205ENST00000505377 HPDLQ96IR7 371 aa12.82□□□□□ -0.36
COL25A1-205ENST00000505377 EPSTI1Q96J88 318 aa12.82□□□□□ -0.36
COL25A1-205ENST00000505377 BBC3Q96PG8 261 aaPredicted RBP12.82□□□□□ -0.36
COL25A1-205ENST00000505377 ACOX2Q99424 681 aa12.82□□□□□ -0.36
COL25A1-205ENST00000505377 MRPL45Q9BRJ2 306 aaKnown RBP12.82□□□□□ -0.36
COL25A1-205ENST00000505377 SLC6A17Q9H1V8 727 aa12.82□□□□□ -0.36
COL25A1-205ENST00000505377 MRPL44Q9H9J2 332 aaKnown RBP12.82□□□□□ -0.36
COL25A1-205ENST00000505377 ITGA11Q9UKX5 1188 aa12.82□□□□□ -0.36
COL25A1-205ENST00000505377 CDH9Q9ULB4 789 aa12.82□□□□□ -0.36
COL25A1-205ENST00000505377 IGHV1OR15-9A0A0B4J2B8 117 aa12.81□□□□□ -0.36
COL25A1-205ENST00000505377 A0A1W2PQF6 199 aa12.81□□□□□ -0.36
COL25A1-205ENST00000505377 TBC1D3BA6NDS4 549 aa12.81□□□□□ -0.36
COL25A1-205ENST00000505377 CLDN5O00501 218 aa12.81□□□□□ -0.36
COL25A1-205ENST00000505377 ARHGAP33O14559 1287 aa12.81□□□□□ -0.36
COL25A1-205ENST00000505377 TULP3O75386 442 aa12.81□□□□□ -0.36
COL25A1-205ENST00000505377 GJB3O75712 270 aa12.81□□□□□ -0.36
COL25A1-205ENST00000505377 ADH1CP00326 375 aa12.81□□□□□ -0.36
COL25A1-205ENST00000505377 MBL2P11226 248 aaPredicted RBP12.81□□□□□ -0.36
COL25A1-205ENST00000505377 TRIP6Q15654 476 aaKnown RBP12.81□□□□□ -0.36
COL25A1-205ENST00000505377 SPDYCQ5MJ68 293 aa12.81□□□□□ -0.36
COL25A1-205ENST00000505377 L1TD1Q5T7N2 865 aaKnown RBP12.81□□□□□ -0.36
COL25A1-205ENST00000505377 VSTM1Q6UX27 236 aa12.81□□□□□ -0.36
COL25A1-205ENST00000505377 MARCH9Q86YJ5 346 aa12.81□□□□□ -0.36
COL25A1-205ENST00000505377 ETFBKMTQ8IXQ9 262 aa12.81□□□□□ -0.36
COL25A1-205ENST00000505377 KRI1Q8N9T8 703 aaKnown RBP12.81□□□□□ -0.36
COL25A1-205ENST00000505377 TRIML1Q8N9V2 468 aa12.81□□□□□ -0.36
COL25A1-205ENST00000505377 MYCBPAPQ8TBZ2 947 aa12.81□□□□□ -0.36
COL25A1-205ENST00000505377 DNAJC19Q96DA6 116 aa12.81□□□□□ -0.36
COL25A1-205ENST00000505377 ZFRQ96KR1 1074 aaKnown RBP12.81□□□□□ -0.36
COL25A1-205ENST00000505377 ACCSQ96QU6 501 aa12.81□□□□□ -0.36
COL25A1-205ENST00000505377 TRIM9Q9C026 710 aa12.81□□□□□ -0.36
COL25A1-205ENST00000505377 ZNF518BQ9C0D4 1074 aa12.81□□□□□ -0.36
COL25A1-205ENST00000505377 DPEP3Q9H4B8 488 aa12.81□□□□□ -0.36
COL25A1-205ENST00000505377 CYP8B1Q9UNU6 501 aa12.81□□□□□ -0.36
COL25A1-205ENST00000505377 CABIN1Q9Y6J0 2220 aa12.8□□□□□ -0.36
COL25A1-205ENST00000505377 H0Y626 953 aa12.8□□□□□ -0.36
COL25A1-205ENST00000505377 SLC9A3R1O14745 358 aaPredicted RBP12.8□□□□□ -0.36
COL25A1-205ENST00000505377 AP5Z1O43299 807 aa12.8□□□□□ -0.36
COL25A1-205ENST00000505377 TRIM16O95361 564 aa12.8□□□□□ -0.36
COL25A1-205ENST00000505377 TMEM191BP0C7N4 346 aa12.8□□□□□ -0.36
COL25A1-205ENST00000505377 FTH1P19P0C7X4 201 aa12.8□□□□□ -0.36
COL25A1-205ENST00000505377 PFKLP17858 780 aa12.8□□□□□ -0.36
COL25A1-205ENST00000505377 WARSP23381 471 aaKnown RBP12.8□□□□□ -0.36
COL25A1-205ENST00000505377 ANXA13P27216 316 aa12.8□□□□□ -0.36
COL25A1-205ENST00000505377 MAOBP27338 520 aa12.8□□□□□ -0.36
COL25A1-205ENST00000505377 ABCD1P33897 745 aa12.8□□□□□ -0.36
COL25A1-205ENST00000505377 EIF2DP41214 584 aaKnown RBP12.8□□□□□ -0.36
COL25A1-205ENST00000505377 PDE6CP51160 858 aa12.8□□□□□ -0.36
COL25A1-205ENST00000505377 BYSLQ13895 437 aaKnown RBP12.8□□□□□ -0.36
COL25A1-205ENST00000505377 ZNF423Q2M1K9 1284 aa12.8□□□□□ -0.36
COL25A1-205ENST00000505377 HSF5Q4G112 596 aaPredicted RBP12.8□□□□□ -0.36
COL25A1-205ENST00000505377 C10orf76Q5T2E6 689 aa12.8□□□□□ -0.36
COL25A1-205ENST00000505377 EGFLAMQ63HQ2 1017 aa12.8□□□□□ -0.36
COL25A1-205ENST00000505377 HS2ST1Q7LGA3 356 aa12.8□□□□□ -0.36
COL25A1-205ENST00000505377 SLCO6A1Q86UG4 719 aa12.8□□□□□ -0.36
COL25A1-205ENST00000505377 TMEM25Q86YD3 366 aa12.8□□□□□ -0.36
COL25A1-205ENST00000505377 BBS7Q8IWZ6 715 aa12.8□□□□□ -0.36
COL25A1-205ENST00000505377 ZNF513Q8N8E2 541 aaPredicted RBP12.8□□□□□ -0.36
COL25A1-205ENST00000505377 CEP76Q8TAP6 659 aa12.8□□□□□ -0.36
COL25A1-205ENST00000505377 MDM1Q8TC05 714 aa12.8□□□□□ -0.36
COL25A1-205ENST00000505377 HNRNPLLQ8WVV9 542 aaKnown RBP12.8□□□□□ -0.36
COL25A1-205ENST00000505377 HVCN1Q96D96 273 aa12.8□□□□□ -0.36
COL25A1-205ENST00000505377 HSPA12BQ96MM6 686 aa12.8□□□□□ -0.36
COL25A1-205ENST00000505377 CD248Q9HCU0 757 aa12.8□□□□□ -0.36
COL25A1-205ENST00000505377 INTS13Q9NVM9 706 aa12.8□□□□□ -0.36
COL25A1-205ENST00000505377 DNAAF2Q9NVR5 837 aaKnown RBP12.8□□□□□ -0.36
COL25A1-205ENST00000505377 CHORDC1Q9UHD1 332 aaPredicted RBP12.8□□□□□ -0.36
COL25A1-205ENST00000505377 RAD54BQ9Y620 910 aa12.8□□□□□ -0.36
COL25A1-205ENST00000505377 H3BQV1 296 aa12.79□□□□□ -0.36
COL25A1-205ENST00000505377 COCHO43405 550 aa12.79□□□□□ -0.36
COL25A1-205ENST00000505377 PRPF6O94906 941 aaKnown RBP12.79□□□□□ -0.36
COL25A1-205ENST00000505377 GCNT3O95395 438 aa12.79□□□□□ -0.36
COL25A1-205ENST00000505377 HOXB2P14652 356 aa12.79□□□□□ -0.36
COL25A1-205ENST00000505377 NDUFV2P19404 249 aa12.79□□□□□ -0.36
COL25A1-205ENST00000505377 GARTP22102 1010 aa12.79□□□□□ -0.36
COL25A1-205ENST00000505377 GJB2P29033 226 aa12.79□□□□□ -0.36
COL25A1-205ENST00000505377 HOXD12P35452 270 aa12.79□□□□□ -0.36
COL25A1-205ENST00000505377 LONP1P36776 959 aaKnown RBP12.79□□□□□ -0.36
COL25A1-205ENST00000505377 PGFP49763 221 aa12.79□□□□□ -0.36
COL25A1-205ENST00000505377 NOP14P78316 857 aaKnown RBP12.79□□□□□ -0.36
COL25A1-205ENST00000505377 CCNI2Q6ZMN8 369 aaPredicted RBP12.79□□□□□ -0.36
COL25A1-205ENST00000505377 CBWD2Q8IUF1 395 aa12.79□□□□□ -0.36
COL25A1-205ENST00000505377 SYCP3Q8IZU3 236 aa12.79□□□□□ -0.36
COL25A1-205ENST00000505377 GLIS3Q8NEA6 775 aa12.79□□□□□ -0.36
COL25A1-205ENST00000505377 SCAMP5Q8TAC9 235 aa12.79□□□□□ -0.36
COL25A1-205ENST00000505377 ADAMTS14Q8WXS8 1223 aa12.79□□□□□ -0.36
COL25A1-205ENST00000505377 C8orf48Q96LL4 319 aa12.79□□□□□ -0.36
COL25A1-205ENST00000505377 MMS19Q96T76 1030 aa12.79□□□□□ -0.36
COL25A1-205ENST00000505377 B3GNT5Q9BYG0 378 aa12.79□□□□□ -0.36
COL25A1-205ENST00000505377 CCSER2Q9H7U1 834 aa12.79□□□□□ -0.36
COL25A1-205ENST00000505377 EXOC7Q9UPT5 735 aa12.79□□□□□ -0.36
COL25A1-205ENST00000505377 RAXQ9Y2V3 346 aa12.79□□□□□ -0.36
COL25A1-205ENST00000505377 E2F8A0AVK6 867 aa12.78□□□□□ -0.36
COL25A1-205ENST00000505377 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.78□□□□□ -0.36
COL25A1-205ENST00000505377 TRIM66O15016 1216 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms