RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 MOSPD3O75425 235 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 SOAT2O75908 522 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 ABL1P00519 1130 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 ASGR2P07307 311 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 ZDHHC11BP0C7U3 371 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 CHRM1P11229 460 aaPredicted RBP10.38□□□□□ -0.75
NR1I3-220ENST00000505005 CCDC130P13994 396 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 ACO1P21399 889 aaKnown RBP10.38□□□□□ -0.75
NR1I3-220ENST00000505005 GNA15P30679 374 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 CCR2P41597 374 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 IFNAR2P48551 515 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 KIF11P52732 1056 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 STARD6P59095 220 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 SYCP1Q15431 976 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 ANO6Q4KMQ2 910 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 SLC44A4Q53GD3 710 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 ACBD5Q5T8D3 534 aaPredicted RBP10.38□□□□□ -0.75
NR1I3-220ENST00000505005 TANGO2Q6ICL3 276 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 PAQR9Q6ZVX9 377 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 BEND5Q7L4P6 421 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 ZDHHC17Q8IUH5 632 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 TMEM130Q8N3G9 435 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 CPA6Q8N4T0 437 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 UBR7Q8N806 425 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 ZNF557Q8N988 423 aaPredicted RBP10.38□□□□□ -0.75
NR1I3-220ENST00000505005 NEK11Q8NG66 645 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 SHC3Q92529 594 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 FAM84AQ96KN4 292 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 PCMTD1Q96MG8 357 aaPredicted RBP10.38□□□□□ -0.75
NR1I3-220ENST00000505005 SPAG5Q96R06 1193 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 KCNK16Q96T55 309 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 SMOQ99835 787 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 NUP58Q9BVL2 599 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 EDEM3Q9BZQ6 932 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 NUCKS1Q9H1E3 243 aaKnown RBP10.38□□□□□ -0.75
NR1I3-220ENST00000505005 LHX5Q9H2C1 402 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 TRPC7Q9HCX4 862 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 ZNF334Q9HCZ1 680 aaPredicted RBP10.38□□□□□ -0.75
NR1I3-220ENST00000505005 ARHGEF3Q9NR81 526 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 ABCC13Q9NSE7 274 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 SAMSN1Q9NSI8 373 aaKnown RBP10.38□□□□□ -0.75
NR1I3-220ENST00000505005 DNMT3LQ9UJW3 386 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 MYO6Q9UM54 1294 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 USP3Q9Y6I4 520 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 A0A0C4DFX4 3053 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 GREB1Q4ZG55 1949 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 CUL9Q8IWT3 2517 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 BDP1A6H8Y1 2624 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 O00370 1275 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 OLFM2O95897 454 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 ZBED1O96006 694 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 GLI1P08151 1106 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 DESP17661 470 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 GDI1P31150 447 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 USP8P40818 1118 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 GPC5P78333 572 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 UBXN1Q04323 297 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 LRRC32Q14392 662 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 KRT31Q15323 416 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 MLF2Q15773 248 aaPredicted RBP10.37□□□□□ -0.75
NR1I3-220ENST00000505005 ITPRIPL2Q3MIP1 535 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 RAB41Q5JT25 222 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 DGKKQ5KSL6 1271 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 KLHDC7AQ5VTJ3 777 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 BTBD8Q5XKL5 378 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 TXNDC8Q6A555 127 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 PM20D1Q6GTS8 502 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 ASTLQ6HA08 431 aaPredicted RBP10.37□□□□□ -0.75
NR1I3-220ENST00000505005 RRAGAQ7L523 313 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 ZNF397Q8NF99 534 aaPredicted RBP10.37□□□□□ -0.75
NR1I3-220ENST00000505005 RNF139Q8WU17 664 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 ZNF606Q8WXB4 792 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 DOCK6Q96HP0 2047 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 ERGIC2Q96RQ1 377 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 CRACR2AQ9BSW2 395 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 VPS16Q9H269 839 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 EPHX3Q9H6B9 360 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 CDH22Q9UJ99 828 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 DNAJC12Q9UKB3 198 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 PCDHGC3Q9UN70 934 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.37□□□□□ -0.75
NR1I3-220ENST00000505005 SH3BP1Q9Y3L3 701 aa10.37□□□□□ -0.75
NR1I3-220ENST00000505005 SPTBN5Q9NRC6 3674 aaKnown RBP10.37□□□□□ -0.75
NR1I3-220ENST00000505005 A0A1W2PQC6 194 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 KANSL1LA0AUZ9 987 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 LGALS16A8MUM7 142 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-220ENST00000505005 THAP12O43422 761 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 CBFA2T2O43439 604 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 TLR5O60602 858 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 OAS1P00973 400 aaKnown RBP10.36□□□□□ -0.75
NR1I3-220ENST00000505005 SERPINC1P01008 464 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 MBL2P11226 248 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-220ENST00000505005 UCHL3P15374 230 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 ZNF18P17022 549 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 SLC9A1P19634 815 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 CHKAP35790 457 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 EIF2DP41214 584 aaKnown RBP10.36□□□□□ -0.75
NR1I3-220ENST00000505005 STAT1P42224 750 aa10.36□□□□□ -0.75
NR1I3-220ENST00000505005 GPR15P49685 360 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms