RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 SMOQ99835 787 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 TRIM62Q9BVG3 475 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 COLEC11Q9BWP8 271 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 DCLK3Q9C098 648 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 NRDE2Q9H7Z3 1164 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 LRRC4Q9HBW1 653 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 KRT82Q9NSB4 513 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 RRN3Q9NYV6 651 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 LRFN2Q9ULH4 789 aa13.92□□□□□ -0.18
LMNA-220ENST00000504687 DRG1Q9Y295 367 aaKnown RBP13.92□□□□□ -0.18
LMNA-220ENST00000504687 TTI1O43156 1089 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 EFCAB14O75071 495 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 AP1G2O75843 785 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 EFEMP2O95967 443 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 ALDH2P05091 517 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 ITGB1P05556 798 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 MYBL2P10244 700 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 NOS2P35228 1153 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 SSR1P43307 286 aaKnown RBP13.91□□□□□ -0.18
LMNA-220ENST00000504687 AIF1P55008 147 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 DAOAP59103 153 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 YWHAZP63104 245 aaKnown RBP13.91□□□□□ -0.18
LMNA-220ENST00000504687 LMNB2Q03252 620 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 RNASELQ05823 741 aaKnown RBP13.91□□□□□ -0.18
LMNA-220ENST00000504687 SMARCB1Q12824 385 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 SMC1AQ14683 1233 aaKnown RBP13.91□□□□□ -0.18
LMNA-220ENST00000504687 TCTN1Q2MV58 587 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 SLC25A52Q3SY17 297 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 ATP13A4Q4VNC1 1196 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 DAB2IPQ5VWQ8 1189 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 TXNRD3NBQ6F5E7 133 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 TTC27Q6P3X3 843 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 BBS12Q6ZW61 710 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 CCDC50Q8IVM0 306 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 DCP1BQ8IZD4 617 aaKnown RBP13.91□□□□□ -0.18
LMNA-220ENST00000504687 TNS4Q8IZW8 715 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 OR10T2Q8NGX3 314 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 ATL2Q8NHH9 583 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 RAPGEF5Q92565 580 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 NKD2Q969F2 451 aaPredicted RBP13.91□□□□□ -0.18
LMNA-220ENST00000504687 MYLPFQ96A32 169 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 PGAP3Q96FM1 320 aaPredicted RBP13.91□□□□□ -0.18
LMNA-220ENST00000504687 PKNOX2Q96KN3 472 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 SLC9A7Q96T83 725 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 HERPUD2Q9BSE4 406 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 MED10Q9BTT4 135 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 ZCWPW1Q9H0M4 648 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 DMAP1Q9NPF5 467 aaPredicted RBP13.91□□□□□ -0.18
LMNA-220ENST00000504687 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.91□□□□□ -0.183e-8■■□□□ 12.4
LMNA-220ENST00000504687 ADAM28Q9UKQ2 775 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 TIMM13Q9Y5L4 95 aaPredicted RBP13.91□□□□□ -0.18
LMNA-220ENST00000504687 USP3Q9Y6I4 520 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 VWA8A3KMH1 1905 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 COL4A6Q14031 1691 aa13.91□□□□□ -0.18
LMNA-220ENST00000504687 ABHD14A-ACY1A0A1B0GW23 586 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 OR6C75A6NL08 312 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 CLDN5O00501 218 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 NRP1O14786 923 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 KIAA0355O15063 1070 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 PRPSAP2O60256 369 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 BEST1O76090 585 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 SEC31AO94979 1220 aaKnown RBP13.9□□□□□ -0.18
LMNA-220ENST00000504687 ECEL1O95672 775 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 CLTBP09497 229 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 FGFR3P22607 806 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 ECHS1P30084 290 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 CARSP49589 748 aaKnown RBP13.9□□□□□ -0.18
LMNA-220ENST00000504687 HDAC4P56524 1084 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 MAP3K7CLP57077 242 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 ADIGQ0VDE8 80 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 IKBKEQ14164 716 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 CASP8Q14790 479 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 NFE2Q16621 373 aaPredicted RBP13.9□□□□□ -0.18
LMNA-220ENST00000504687 ODF2Q5BJF6 829 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 SPDYCQ5MJ68 293 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 ANKS1BQ7Z6G8 1248 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 MAP7D3Q8IWC1 876 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 SIX6OS1Q8N1H7 587 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 LRRC43Q8N309 656 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 RNF25Q96BH1 459 aaPredicted RBP13.9□□□□□ -0.18
LMNA-220ENST00000504687 FAF2Q96CS3 445 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 VWCEQ96DN2 955 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 ABHD8Q96I13 439 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 NPY6RQ99463 290 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 C11orf49Q9H6J7 331 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 POPDC2Q9HBU9 364 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 STAP1Q9ULZ2 295 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 NEU2Q9Y3R4 380 aa13.9□□□□□ -0.18
LMNA-220ENST00000504687 PLXNA3P51805 1871 aa13.89□□□□□ -0.19
LMNA-220ENST00000504687 LRRD1A4D1F6 860 aa13.89□□□□□ -0.19
LMNA-220ENST00000504687 I3L4J1 428 aa13.89□□□□□ -0.19
LMNA-220ENST00000504687 TBC1D4O60343 1298 aa13.89□□□□□ -0.19
LMNA-220ENST00000504687 TADA2AO75478 443 aa13.89□□□□□ -0.19
LMNA-220ENST00000504687 ZMYND10O75800 440 aa13.89□□□□□ -0.19
LMNA-220ENST00000504687 LCP1P13796 627 aa13.89□□□□□ -0.19
LMNA-220ENST00000504687 MAGEA11P43364 429 aa13.89□□□□□ -0.19
LMNA-220ENST00000504687 OR1G1P47890 313 aa13.89□□□□□ -0.19
LMNA-220ENST00000504687 TKTL1P51854 596 aa13.89□□□□□ -0.19
LMNA-220ENST00000504687 ATN1P54259 1190 aaPredicted RBP13.89□□□□□ -0.19
LMNA-220ENST00000504687 PTK6Q13882 451 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms