RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 UBXN6Q9BZV1 441 aa13.98□□□□□ -0.17
PDLIM7-212ENST00000504380 NUCKS1Q9H1E3 243 aaKnown RBP13.98□□□□□ -0.17
PDLIM7-212ENST00000504380 LHX5Q9H2C1 402 aa13.98□□□□□ -0.17
PDLIM7-212ENST00000504380 LRRC4Q9HBW1 653 aa13.98□□□□□ -0.17
PDLIM7-212ENST00000504380 WDR6Q9NNW5 1121 aaKnown RBP13.98□□□□□ -0.17
PDLIM7-212ENST00000504380 ABHD10Q9NUJ1 306 aa13.98□□□□□ -0.17
PDLIM7-212ENST00000504380 GMIPQ9P107 970 aa13.98□□□□□ -0.17
PDLIM7-212ENST00000504380 ARHGAP20Q9P2F6 1191 aa13.98□□□□□ -0.17
PDLIM7-212ENST00000504380 ZNF638Q14966 1978 aaKnown RBP13.98□□□□□ -0.17
PDLIM7-212ENST00000504380 CLUHO75153 1309 aa13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 TMCO5BA8MYB1 307 aa13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 E5RJQ4 531 aa13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 DDX3XO00571 662 aaKnown RBP eCLIP13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 RTN3O95197 1032 aaPredicted RBP13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 ABL1P00519 1130 aa13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 CYP1A1P04798 512 aaPredicted RBP13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 SERPING1P05155 500 aa13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 CCDC172P0C7W6 258 aa13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 IL9P15248 144 aa13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 MTHFRP42898 656 aa13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 MRE11P49959 708 aa13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 NOMO3P69849 1222 aa13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 PDCLQ13371 301 aa13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 CBX2Q14781 532 aaPredicted RBP13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 TEAD2Q15562 447 aa13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 CLEC16AQ2KHT3 1053 aa13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 PTPN20Q4JDL3 420 aa13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 RAB41Q5JT25 222 aa13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 CYP4A22Q5TCH4 519 aa13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 SMYD5Q6GMV2 418 aa13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 TMEM35BQ8NCS4 154 aa13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 KCTD13Q8WZ19 329 aa13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 MYRFLQ96LU7 910 aa13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 TTLL2Q9BWV7 592 aa13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 SLC4A5Q9BY07 1137 aa13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 ATXN3LQ9H3M9 355 aa13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 TAS2R14Q9NYV8 317 aa13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 IL37Q9NZH6 218 aa13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 MRPS23Q9Y3D9 190 aaKnown RBP13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 MYO16Q9Y6X6 1858 aa13.97□□□□□ -0.17
PDLIM7-212ENST00000504380 A0A1W2PQH9 124 aa13.96□□□□□ -0.17
PDLIM7-212ENST00000504380 ERBB2P04626 1255 aa13.96□□□□□ -0.17
PDLIM7-212ENST00000504380 HNRNPH3P31942 346 aaKnown RBP13.96□□□□□ -0.17
PDLIM7-212ENST00000504380 CDH5P33151 784 aaPredicted RBP13.96□□□□□ -0.17
PDLIM7-212ENST00000504380 EIF4A3P38919 411 aaKnown RBP13.96□□□□□ -0.17
PDLIM7-212ENST00000504380 EPHA5P54756 1037 aa13.96□□□□□ -0.17
PDLIM7-212ENST00000504380 AAK1Q2M2I8 961 aa13.96□□□□□ -0.17
PDLIM7-212ENST00000504380 CYP26C1Q6V0L0 522 aa13.96□□□□□ -0.17
PDLIM7-212ENST00000504380 HFE2Q6ZVN8 426 aa13.96□□□□□ -0.17
PDLIM7-212ENST00000504380 SCD5Q86SK9 330 aa13.96□□□□□ -0.17
PDLIM7-212ENST00000504380 SCUBE3Q8IX30 993 aa13.96□□□□□ -0.17
PDLIM7-212ENST00000504380 SIX6OS1Q8N1H7 587 aa13.96□□□□□ -0.17
PDLIM7-212ENST00000504380 MCRS1Q96EZ8 462 aa13.96□□□□□ -0.17
PDLIM7-212ENST00000504380 TRMT2BQ96GJ1 504 aaKnown RBP13.96□□□□□ -0.17
PDLIM7-212ENST00000504380 PPP1R13BQ96KQ4 1090 aa13.96□□□□□ -0.17
PDLIM7-212ENST00000504380 HSFY1Q96LI6 401 aa13.96□□□□□ -0.17
PDLIM7-212ENST00000504380 ZSWIM3Q96MP5 696 aa13.96□□□□□ -0.17
PDLIM7-212ENST00000504380 MYADMQ96S97 322 aa13.96□□□□□ -0.17
PDLIM7-212ENST00000504380 NMUR1Q9HB89 426 aa13.96□□□□□ -0.17
PDLIM7-212ENST00000504380 PNPLA8Q9NP80 782 aa13.96□□□□□ -0.17
PDLIM7-212ENST00000504380 OSER1Q9NX31 292 aa13.96□□□□□ -0.17
PDLIM7-212ENST00000504380 SCML2Q9UQR0 700 aa13.96□□□□□ -0.17
PDLIM7-212ENST00000504380 CEP83Q9Y592 693 aa13.96□□□□□ -0.17
PDLIM7-212ENST00000504380 USP3Q9Y6I4 520 aa13.96□□□□□ -0.17
PDLIM7-212ENST00000504380 XIRP2A4UGR9 3374 aa13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 C2orf78A6NCI8 922 aa13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 PAPSS1O43252 624 aaPredicted RBP13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 ZBED1O96006 694 aa13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 UNGP13051 313 aaPredicted RBP13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 BMP1P13497 986 aa13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 RPL34P49207 117 aaKnown RBP13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 MEA1Q16626 185 aa13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 TSR1Q2NL82 804 aaKnown RBP13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 GPR158Q5T848 1215 aa13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 TXNDC8Q6A555 127 aa13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 OR6B2Q6IFH4 312 aa13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 MMS22LQ6ZRQ5 1243 aa13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 BHLHA9Q7RTU4 235 aa13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 TMEM110Q86TL2 294 aa13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 ERICH1Q86X53 443 aa13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 CNGA4Q8IV77 575 aa13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 FMNL3Q8IVF7 1028 aa13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 STK32AQ8WU08 396 aa13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 PIWIL1Q96J94 861 aaKnown RBP13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 CEP295NLQ96MC4 621 aa13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 FBXO44Q9H4M3 255 aa13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 TRPC7Q9HCX4 862 aa13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 ZNHIT6Q9NWK9 470 aaKnown RBP13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 COMMD8Q9NX08 183 aa13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 TRPM5Q9NZQ8 1165 aa13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 UXTQ9UBK9 157 aaPredicted RBP13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 NUDT5Q9UKK9 219 aa13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 OBSL1O75147 1896 aa13.95□□□□□ -0.18
PDLIM7-212ENST00000504380 A0A087X0T9 212 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 FAM92AA1XBS5 289 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 ZNF840PA6NDX5 716 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 YJEFN3A6XGL0 299 aa13.94□□□□□ -0.18
PDLIM7-212ENST00000504380 E7ENQ6 273 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms