RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 CYP11B1P15538 503 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 FERP16591 822 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 ATF6P18850 670 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 TGM1P22735 817 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 PMLP29590 882 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 CACNA2D1P54289 1103 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 BCAT1P54687 386 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 MAP3K7CLP57077 242 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 SLC8A3P57103 927 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 ARID5AQ03989 594 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 CNGA2Q16280 664 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 TAF12Q16514 161 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 ASIC2Q16515 512 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 DDR2Q16832 855 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 SFMBT2Q5VUG0 894 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 SDHAF4Q5VUM1 108 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 LCLAT1Q6UWP7 414 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 TMC5Q6UXY8 1006 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 TTC30AQ86WT1 665 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 ANKRD52Q8NB46 1076 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 CMASQ8NFW8 434 aaPredicted RBP10.6□□□□□ -0.71
NUP54-203ENST00000504173 GIPC2Q8TF65 315 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 ZNF606Q8WXB4 792 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 ZSWIM1Q9BR11 485 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 DUSP16Q9BY84 665 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 PRKD2Q9BZL6 878 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 NUCKS1Q9H1E3 243 aaKnown RBP10.6□□□□□ -0.71
NUP54-203ENST00000504173 PIDD1Q9HB75 910 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 CAPN11Q9UMQ6 739 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.6□□□□□ -0.71
NUP54-203ENST00000504173 LUC7L2Q9Y383 392 aaKnown RBP10.6□□□□□ -0.71
NUP54-203ENST00000504173 PTPRDP23468 1912 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 IGF2RP11717 2491 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 NBEAQ8NFP9 2946 aa10.6□□□□□ -0.71
NUP54-203ENST00000504173 DSPP15924 2871 aaKnown RBP10.59□□□□□ -0.71
NUP54-203ENST00000504173 SLC30A4O14863 429 aa10.59□□□□□ -0.71
NUP54-203ENST00000504173 POU2F2P09086 479 aa10.59□□□□□ -0.71
NUP54-203ENST00000504173 CASP14P31944 242 aa10.59□□□□□ -0.71
NUP54-203ENST00000504173 KRT9P35527 623 aa10.59□□□□□ -0.71
NUP54-203ENST00000504173 ZBED6P86452 979 aa10.59□□□□□ -0.71
NUP54-203ENST00000504173 BST2Q10589 180 aaKnown RBP10.59□□□□□ -0.71
NUP54-203ENST00000504173 TAF3Q5VWG9 929 aa10.59□□□□□ -0.71
NUP54-203ENST00000504173 CES5AQ6NT32 575 aa10.59□□□□□ -0.71
NUP54-203ENST00000504173 CLEC20AQ6ZU45 233 aa10.59□□□□□ -0.71
NUP54-203ENST00000504173 ITIH5Q86UX2 942 aa10.59□□□□□ -0.71
NUP54-203ENST00000504173 DRC7Q8IY82 874 aa10.59□□□□□ -0.71
NUP54-203ENST00000504173 PLCD3Q8N3E9 789 aa10.59□□□□□ -0.71
NUP54-203ENST00000504173 STKLD1Q8NE28 680 aa10.59□□□□□ -0.71
NUP54-203ENST00000504173 UBA3Q8TBC4 463 aa10.59□□□□□ -0.71
NUP54-203ENST00000504173 GPR152Q8TDT2 470 aa10.59□□□□□ -0.71
NUP54-203ENST00000504173 EPS8L1Q8TE68 723 aa10.59□□□□□ -0.71
NUP54-203ENST00000504173 SMG7Q92540 1137 aaKnown RBP10.59□□□□□ -0.71
NUP54-203ENST00000504173 ZNF707Q96C28 371 aaPredicted RBP10.59□□□□□ -0.71
NUP54-203ENST00000504173 SPATA17Q96L03 361 aa10.59□□□□□ -0.71
NUP54-203ENST00000504173 C8orf48Q96LL4 319 aa10.59□□□□□ -0.71
NUP54-203ENST00000504173 ZNF512Q96ME7 567 aaPredicted RBP10.59□□□□□ -0.71
NUP54-203ENST00000504173 KCNK16Q96T55 309 aa10.59□□□□□ -0.71
NUP54-203ENST00000504173 SMOQ99835 787 aa10.59□□□□□ -0.71
NUP54-203ENST00000504173 PDCL3Q9H2J4 239 aa10.59□□□□□ -0.71
NUP54-203ENST00000504173 POMKQ9H5K3 350 aa10.59□□□□□ -0.71
NUP54-203ENST00000504173 CSNK1G1Q9HCP0 422 aa10.59□□□□□ -0.71
NUP54-203ENST00000504173 TMEM30AQ9NV96 361 aa10.59□□□□□ -0.71
NUP54-203ENST00000504173 MYH10P35580 1976 aa10.59□□□□□ -0.71
NUP54-203ENST00000504173 SLC38A8A6NNN8 435 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 XPO1O14980 1071 aaKnown RBP10.58□□□□□ -0.72
NUP54-203ENST00000504173 BEST1O76090 585 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 SETSIPP0DME0 302 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 CSH1P0DML2 217 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 CSH2P0DML3 217 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 ITIH3Q06033 890 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 PDE4CQ08493 712 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 IFRD2Q12894 506 aaPredicted RBP10.58□□□□□ -0.72
NUP54-203ENST00000504173 PKDCCQ504Y2 493 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 DENND1BQ6P3S1 775 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 CYP26C1Q6V0L0 522 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 DENND5BQ6ZUT9 1274 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 DNAJB7Q7Z6W7 309 aaPredicted RBP10.58□□□□□ -0.72
NUP54-203ENST00000504173 GPR149Q86SP6 731 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 NOP9Q86U38 636 aaKnown RBP10.58□□□□□ -0.72
NUP54-203ENST00000504173 ZNF677Q86XU0 584 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 PASD1Q8IV76 773 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 ZMIZ2Q8NF64 920 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 SLC20A1Q8WUM9 679 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 SECISBP2LQ93073 1101 aaKnown RBP10.58□□□□□ -0.72
NUP54-203ENST00000504173 PSMG2Q969U7 264 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 CEP295NLQ96MC4 621 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 CORO1BQ9BR76 489 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 ADAM7Q9H2U9 754 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 ASAH2Q9NR71 780 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 AIPL1Q9NZN9 384 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 NOCTQ9UK39 431 aaKnown RBP10.58□□□□□ -0.72
NUP54-203ENST00000504173 PCDHGC3Q9UN70 934 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 MAGED2Q9UNF1 606 aaPredicted RBP10.58□□□□□ -0.72
NUP54-203ENST00000504173 DUSP12Q9UNI6 340 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 USTQ9Y2C2 406 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 ASB3Q9Y575 518 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 CEP83Q9Y592 693 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 ITPR1Q14643 2758 aa10.58□□□□□ -0.72
NUP54-203ENST00000504173 CNOT1A5YKK6 2376 aaKnown RBP10.58□□□□□ -0.72
NUP54-203ENST00000504173 AKR1B15C9JRZ8 316 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms