RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 SGO1Q5FBB7 561 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 HIST2H2AA3Q6FI13 130 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 ABRAQ8N0Z2 381 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 BLOC1S5Q8TDH9 187 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 SCN3BQ9NY72 215 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 WWOXQ9NZC7 414 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 KDM1AO60341 852 aa17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 ACADSP16219 412 aa17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 ALDH7A1P49419 539 aaKnown RBP17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 MYL6P60660 151 aa17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 CCDC85BQ15834 202 aaPredicted RBP17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 ARHGAP15Q53QZ3 475 aa17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 METTL7BQ6UX53 244 aa17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 CNDP1Q96KN2 507 aa17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 BRD8Q9H0E9 1235 aa17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 NOD2Q9HC29 1040 aa17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 ZNF229Q9UJW7 825 aa17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 NFIBO00712 420 aa17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 SUPT7LO94864 414 aa17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 SARSP49591 514 aaKnown RBP17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 CCDC15Q0P6D6 951 aa17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 KIAA0895Q8NCT3 520 aa17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 EIF3LQ9Y262 564 aaKnown RBP17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 CELF2O95319 508 aaKnown RBP17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 PGK2P07205 417 aa17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 LHX1P48742 406 aa17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 PTENP60484 403 aa17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 HOMEZQ8IX15 550 aa17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 EGFRP00533 1210 aa17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 S100A5P33763 92 aa17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 CASP7P55210 303 aa17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 B4GALNT2Q8NHY0 566 aa17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 L3MBTL3Q96JM7 780 aaPredicted RBP17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 ECSITQ9BQ95 431 aa17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 APPL1Q9UKG1 709 aa17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 PPP2R3BQ9Y5P8 575 aa17.09■□□□□ 0.33
PCDHA1-203ENST00000504120 VPS26AO75436 327 aa17.08■□□□□ 0.33
PCDHA1-203ENST00000504120 TRPC1P48995 793 aa17.08■□□□□ 0.33
PCDHA1-203ENST00000504120 DTNBP1Q96EV8 351 aa17.08■□□□□ 0.33
PCDHA1-203ENST00000504120 TMEM121Q9BTD3 319 aa17.08■□□□□ 0.33
PCDHA1-203ENST00000504120 ASCC2Q9H1I8 757 aaPredicted RBP17.08■□□□□ 0.33
PCDHA1-203ENST00000504120 RUVBL2Q9Y230 463 aaKnown RBP17.08■□□□□ 0.33
PCDHA1-203ENST00000504120 PPP4R4Q6NUP7 873 aa17.08■□□□□ 0.33
PCDHA1-203ENST00000504120 BBS7Q8IWZ6 715 aa17.08■□□□□ 0.33
PCDHA1-203ENST00000504120 PLEKHA8Q96JA3 519 aa17.08■□□□□ 0.33
PCDHA1-203ENST00000504120 EFCAB1Q9HAE3 211 aa17.08■□□□□ 0.33
PCDHA1-203ENST00000504120 GIMAP4Q9NUV9 329 aa17.08■□□□□ 0.33
PCDHA1-203ENST00000504120 RNF112Q9ULX5 631 aa17.08■□□□□ 0.33
PCDHA1-203ENST00000504120 MYOM1P52179 1685 aa17.08■□□□□ 0.32
PCDHA1-203ENST00000504120 BCL9O00512 1426 aa17.08■□□□□ 0.32
PCDHA1-203ENST00000504120 TNS2Q63HR2 1409 aa17.08■□□□□ 0.32
PCDHA1-203ENST00000504120 KIF1AQ12756 1690 aa17.08■□□□□ 0.32
PCDHA1-203ENST00000504120 CES2O00748 559 aa17.08■□□□□ 0.32
PCDHA1-203ENST00000504120 DAB1O75553 588 aa17.08■□□□□ 0.32
PCDHA1-203ENST00000504120 BST2Q10589 180 aaKnown RBP17.08■□□□□ 0.32
PCDHA1-203ENST00000504120 POLD3Q15054 466 aaPredicted RBP17.08■□□□□ 0.32
PCDHA1-203ENST00000504120 TJAP1Q5JTD0 557 aa17.08■□□□□ 0.32
PCDHA1-203ENST00000504120 CACHD1Q5VU97 1274 aa17.08■□□□□ 0.32
PCDHA1-203ENST00000504120 ZNF467Q7Z7K2 595 aaPredicted RBP17.08■□□□□ 0.32
PCDHA1-203ENST00000504120 FBXO16Q8IX29 292 aaPredicted RBP17.08■□□□□ 0.32
PCDHA1-203ENST00000504120 CCT7Q99832 543 aa17.08■□□□□ 0.32
PCDHA1-203ENST00000504120 GPATCH2LQ9NWQ4 482 aa17.08■□□□□ 0.32
PCDHA1-203ENST00000504120 ITGA11Q9UKX5 1188 aa17.08■□□□□ 0.32
PCDHA1-203ENST00000504120 PMS1P54277 932 aaKnown RBP17.08■□□□□ 0.32
PCDHA1-203ENST00000504120 FAM117BQ6P1L5 589 aa17.08■□□□□ 0.32
PCDHA1-203ENST00000504120 RXFP2Q8WXD0 754 aa17.08■□□□□ 0.32
PCDHA1-203ENST00000504120 FBXO32Q969P5 355 aa17.08■□□□□ 0.32
PCDHA1-203ENST00000504120 ABHD8Q96I13 439 aa17.08■□□□□ 0.32
PCDHA1-203ENST00000504120 DMGDHQ9UI17 866 aaKnown RBP17.08■□□□□ 0.32
PCDHA1-203ENST00000504120 SLCO1B7G3V0H7 640 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 TM9SF1O15321 606 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 NCAM2O15394 837 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 LRG1P02750 347 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 TGFB3P10600 412 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 NQO1P15559 274 aaKnown RBP17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 PLOD1Q02809 727 aaPredicted RBP17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 PGM5Q15124 567 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 TMEM119Q4V9L6 283 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 CYB5D1Q6P9G0 228 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 FAM83AQ86UY5 434 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 TUBGCP3Q96CW5 907 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 AAASQ9NRG9 546 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 SFMBT1Q9UHJ3 866 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 SOX13Q9UN79 622 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 VTNP04004 478 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 VIL1P09327 827 aaKnown RBP17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 GRK2P25098 689 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 PSMA4P25789 261 aaKnown RBP17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 RAP1GAPP47736 663 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 LAMTOR4Q0VGL1 99 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 NIPA1Q7RTP0 329 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 PCDH9Q9HC56 1237 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 KRT8P05787 483 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 SHMT1P34896 483 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 MCOLN2Q8IZK6 566 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 SPIRE2Q8WWL2 714 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 SH3GL3Q99963 347 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 IL17RBQ9NRM6 502 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 PSMC6P62333 389 aa17.07■□□□□ 0.32
PCDHA1-203ENST00000504120 ZNF333Q96JL9 665 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms